Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_L22
(856 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41105-4|AAA82397.2| 407|Caenorhabditis elegans 3-ketoacyl-coa ... 262 3e-70
U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical pr... 189 3e-48
U41105-8|AAA82403.1| 460|Caenorhabditis elegans Hypothetical pr... 125 5e-29
Z81546-11|CAB04455.2| 394|Caenorhabditis elegans Hypothetical p... 119 3e-27
M77697-2|AAA27897.2| 448|Caenorhabditis elegans Hypothetical pr... 87 2e-17
D86473-1|BAA20377.1| 412|Caenorhabditis elegans 3-keto-acyl-CoA... 38 0.009
AL023847-7|CAA19548.1| 412|Caenorhabditis elegans Hypothetical ... 38 0.009
U56965-9|AAB52662.2| 265|Caenorhabditis elegans Hypothetical pr... 29 3.2
AF098499-2|AAC67396.1| 155|Caenorhabditis elegans Hypothetical ... 29 3.2
AF000261-10|AAB52930.1| 639|Caenorhabditis elegans Hypothetical... 29 4.2
Z36948-4|CAA85411.3| 615|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z99102-1|CAB11776.1| 523|Caenorhabditis elegans Hypothetical pr... 28 9.7
Z81545-10|CAB04448.1| 170|Caenorhabditis elegans Hypothetical p... 28 9.7
AL031627-25|CAA20971.1| 170|Caenorhabditis elegans Hypothetical... 28 9.7
>U41105-4|AAA82397.2| 407|Caenorhabditis elegans 3-ketoacyl-coa
thiolase protein 1 protein.
Length = 407
Score = 262 bits (641), Expect = 3e-70
Identities = 130/247 (52%), Positives = 165/247 (66%)
Frame = +3
Query: 111 STKVSLNEVVIASAVRTPMXXXXXXXXXXXXXXXXXXXVNAAIERAGIPKEEIKEVYIGN 290
S +S I A RTP+ + AA+ER + I+EV++G
Sbjct: 16 SAALSNKHAFIVGAARTPIGSFRSSLSSVTAPELASVAIKAALERGAVKPSSIQEVFLGQ 75
Query: 291 VCSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGM 470
VC AN GQAPARQA + AGL S TTVNKVC+SG+K+I+LAAQ +QTG QD + GGM
Sbjct: 76 VCQANAGQAPARQAALGAGLDLSVAVTTVNKVCSSGLKAIILAAQQIQTGHQDFAIGGGM 135
Query: 471 ESMSNVPFYLKRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDE 650
ESMS VPFY++RGE YGG Q++DGIV DGLTD Y+K HMGNC E T+K++ ITR+DQDE
Sbjct: 136 ESMSQVPFYVQRGEIPYGGFQVIDGIVKDGLTDAYDKVHMGNCGEKTSKEMGITRKDQDE 195
Query: 651 YAVNSYKRSAAAYEAKAFVDELVPVPVPQKRGAPVIFAEXEXYKXVNFEKFTKLSTVFQK 830
YA+NSYK+SA A+E E+VPV V K+G ++ + E K VNF+KFT L TVFQK
Sbjct: 196 YAINSYKKSAKAWENGNIGPEVVPVNVKSKKGVTIVDKDEEFTK-VNFDKFTSLRTVFQK 254
Query: 831 ENGTVTA 851
+ GT+TA
Sbjct: 255 D-GTITA 260
>U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical
protein T02G5.7 protein.
Length = 390
Score = 189 bits (460), Expect = 3e-48
Identities = 104/244 (42%), Positives = 143/244 (58%), Gaps = 1/244 (0%)
Frame = +3
Query: 120 VSLNEVVIASAVRTPMXXXXXXXXXXXXXXXXXXXVNAAIERAGIPKEEIKEVYIGNVCS 299
+S +V I S RTP+ AAIER+G+ E+I+EV G V
Sbjct: 1 MSDKKVFILSGARTPIGAYRGSFANFGAVELGTVAAKAAIERSGVAPEKIEEVIGGCVLP 60
Query: 300 ANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESM 479
A LGQ RQ + AGLP +T TVNKVC+S MK+++ AA ++ G D IL G E+M
Sbjct: 61 AGLGQNVTRQISLSAGLPVTTQAVTVNKVCSSSMKALVTAAVEIKAGYYDTILVVGTENM 120
Query: 480 SNVPFYLKRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAV 659
S VPFY+ RGE +GG+Q+ DGI DGL D+ K MG CAE T K ITR++QD YA+
Sbjct: 121 SQVPFYVPRGEIPFGGIQMTDGISKDGLEDIKEKGPMGLCAEKTVKDYGITREEQDAYAI 180
Query: 660 NSYKRSAAAYEAKAFVDELVPVPVPQKRGAPVIFAEXEXYKXVNFEKFTKLSTVFQKE-N 836
SYK+++ A+ ++ F +E+VPV V R + V+ E E YK + K + L VF ++
Sbjct: 181 ESYKKASNAWSSEKFSEEVVPVSVKTSR-SEVVITEDEEYKKLIESKVSSLKPVFVRDGT 239
Query: 837 GTVT 848
GT+T
Sbjct: 240 GTIT 243
>U41105-8|AAA82403.1| 460|Caenorhabditis elegans Hypothetical
protein T02G5.4 protein.
Length = 460
Score = 125 bits (301), Expect = 5e-29
Identities = 77/188 (40%), Positives = 104/188 (55%), Gaps = 2/188 (1%)
Frame = +3
Query: 24 EIVVTVSNRNIVLLDFNVLLQIFTAMAAFSTKVSLNEVVIASAVRTPMXXXXXXXXXXXX 203
EI+ ++ LD + + + T AA S K + I A RTP+
Sbjct: 69 EIMSRYFKAKMLSLDGHAIGRGITTSAALSNK----DAFIVGAARTPIGSFRSSLSSVTA 124
Query: 204 XXXXXXXVNAAIERAGIPKEEIKE--VYIGNVCSANLGQAPARQAVIFAGLPKSTICTTV 377
+ AA+ER + I+E V++G VC AN GQA ARQA + AGL S TTV
Sbjct: 125 PELASVAIKAALERGAVKPSSIQEANVFLGQVCHANAGQASARQAALGAGLDLSVAVTTV 184
Query: 378 NKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMSNVPFYLKRGETSYGGMQLVDGIVFD 557
NK +SGMK+I+LAAQ +QTG QD+ + GGMESMS VPF+L R E S Q V+ V D
Sbjct: 185 NKGWSSGMKAIILAAQQIQTGHQDLAIGGGMESMSQVPFFLARVEQSSNKYQ-VEQTVQD 243
Query: 558 GLTDVYNK 581
G++D ++K
Sbjct: 244 GISDFFDK 251
>Z81546-11|CAB04455.2| 394|Caenorhabditis elegans Hypothetical
protein F53A2.7 protein.
Length = 394
Score = 119 bits (286), Expect = 3e-27
Identities = 71/211 (33%), Positives = 117/211 (55%), Gaps = 3/211 (1%)
Frame = +3
Query: 231 AAIERAGIPKEEIKEVYIGNV-CSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMKS 407
AA++ A + + + V GNV S+ G +R + +G+P++ TVN++C SG ++
Sbjct: 38 AALKHANVGADAVDHVIFGNVVASSRDGIYLSRHIGLKSGVPQNVGALTVNRLCGSGFQA 97
Query: 408 IMLAAQGLQTGAQDIILAGGMESMSNVPFYLK--RGETSYGGMQLVDGIVFDGLTDVYNK 581
++ AAQ ++ G +I+LAGG E+MS VPF ++ R T+ G + +++D L+D Y K
Sbjct: 98 VVNAAQAIKLGESNIVLAGGTENMSMVPFAVRDIRFGTALGKKYEFEDMLWDSLSDPYAK 157
Query: 582 FHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYEAKAFVDELVPVPVPQKRGAPVIF 761
MG AE + ++TRQ+ DE+A+ S A EA + +E+V + + ++G F
Sbjct: 158 LAMGQTAEKLGAQYKVTRQEADEFALRSQTLWKKAQEAGVYKNEIVGITIKGRKGEE-SF 216
Query: 762 AEXEXYKXVNFEKFTKLSTVFQKENGTVTAG 854
E + E KL VFQK+ G V AG
Sbjct: 217 EIDEHPRATTAESLAKLKPVFQKD-GLVNAG 246
>M77697-2|AAA27897.2| 448|Caenorhabditis elegans Hypothetical
protein B0303.3 protein.
Length = 448
Score = 86.6 bits (205), Expect = 2e-17
Identities = 71/272 (26%), Positives = 118/272 (43%), Gaps = 19/272 (6%)
Frame = +3
Query: 93 TAMAAFST-KVSLNEVVIASAVRTPMXXXXXXXXXXXXXXXXXXXVNAAIERAGIPKEEI 269
TA AA + K ++ +V+ AVRTP + A +E+ +P E++
Sbjct: 11 TARAASAVAKKNMPNIVLVDAVRTPFVVSGTVFKDLMAVDLQKEAIKALVEKTKLPYEQL 70
Query: 270 KEVYIGNVCSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQD 449
+ G V AR+A + AG+P TV C S ++ L TG +
Sbjct: 71 DHIICGTVIQECKTSNIAREAALLAGVPDKIPAHTVTLACISSNVAMTTGMGMLATGNAN 130
Query: 450 IILAGGMESMSNVPF-YLKRGETSYGGM--------------QLVDGIV---FDGLTDVY 575
I+AGG+E +S+VP Y + + GM Q+V ++ + +
Sbjct: 131 AIIAGGVELLSDVPIRYNRNARKAMLGMNKAKDVPSKLKIGGQIVKNLLSPELPAVAEFS 190
Query: 576 NKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYEAKAFVDELVPVPVPQKRGAPV 755
MG+ + A ++R++QDE+A+ S+ ++ A + F D +VPV + K+ P
Sbjct: 191 TGETMGHSGDRLAAAFNVSRREQDEFAIRSHTLASEAAKNGKFTD-VVPVFLDGKK--PK 247
Query: 756 IFAEXEXYKXVNFEKFTKLSTVFQKENGTVTA 851
E + EK + L F K +GTVTA
Sbjct: 248 TIKEDNGIRVSTLEKLSSLKPAFVKPHGTVTA 279
>D86473-1|BAA20377.1| 412|Caenorhabditis elegans 3-keto-acyl-CoA
thiolase protein.
Length = 412
Score = 37.9 bits (84), Expect = 0.009
Identities = 22/86 (25%), Positives = 38/86 (44%)
Frame = +3
Query: 225 VNAAIERAGIPKEEIKEVYIGNVCSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMK 404
V A++ + +I++ +G + A V G+P VN CASG
Sbjct: 37 VTTALDDCKMKYSDIQQATVGYLFGGTCCGQRALYEVGLTGIP----IFNVNNACASGSS 92
Query: 405 SIMLAAQGLQTGAQDIILAGGMESMS 482
+ L Q +++G D++L G E M+
Sbjct: 93 GLFLGKQIIESGNSDVVLCAGFERMA 118
>AL023847-7|CAA19548.1| 412|Caenorhabditis elegans Hypothetical
protein Y57A10C.6 protein.
Length = 412
Score = 37.9 bits (84), Expect = 0.009
Identities = 22/86 (25%), Positives = 38/86 (44%)
Frame = +3
Query: 225 VNAAIERAGIPKEEIKEVYIGNVCSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMK 404
V A++ + +I++ +G + A V G+P VN CASG
Sbjct: 37 VTTALDDCKMKYSDIQQATVGYLFGGTCCGQRALYEVGLTGIP----IFNVNNACASGSS 92
Query: 405 SIMLAAQGLQTGAQDIILAGGMESMS 482
+ L Q +++G D++L G E M+
Sbjct: 93 GLFLGKQIIESGNSDVVLCAGFERMA 118
>U56965-9|AAB52662.2| 265|Caenorhabditis elegans Hypothetical
protein C15H9.2 protein.
Length = 265
Score = 29.5 bits (63), Expect = 3.2
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
Frame = +2
Query: 293 LFCKFG-PSTCK-TSCNICRFAKKYHMYNCKQ--SMCLWH----EIYNVGSTRSTNWSPR 448
L C +G PS + T NI + H ++CK C ++ YN+ ST+ W+ R
Sbjct: 182 LNCIYGYPSVFRITRGNIVELLELSHFFDCKNVTMFCEYNLCNDTCYNIRSTQKMEWAIR 241
Query: 449 YN 454
YN
Sbjct: 242 YN 243
>AF098499-2|AAC67396.1| 155|Caenorhabditis elegans Hypothetical
protein C43H8.1 protein.
Length = 155
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +3
Query: 537 VDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAV 659
+DG++F L + N FH C AK+++I R D+ ++ +
Sbjct: 72 LDGLLFQFLDEALNSFHAEPCF--VAKRVEILRFDKKKFEI 110
>AF000261-10|AAB52930.1| 639|Caenorhabditis elegans Hypothetical
protein F19B10.10 protein.
Length = 639
Score = 29.1 bits (62), Expect = 4.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 329 SCNICRFAKKYHMYNCKQSMCLWHEI 406
+C++ R A KY+ Y +QS LW I
Sbjct: 15 ACSLRRMANKYYPYTMRQSFPLWTSI 40
>Z36948-4|CAA85411.3| 615|Caenorhabditis elegans Hypothetical
protein D2089.4a protein.
Length = 615
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +3
Query: 693 AKAFVDELVPVPVPQKRGAPVIFAEXEXYKXVNFEKFTKLSTVFQKENGTVT 848
A AFV + VP+ Q RG +FA+ ++ + F+K +S NG+V+
Sbjct: 169 AAAFVSGMTAVPI-QIRGR-TLFAQYSTHRELKFDKNKAISDTESVANGSVS 218
>Z99102-1|CAB11776.1| 523|Caenorhabditis elegans Hypothetical
protein B0331.2 protein.
Length = 523
Score = 27.9 bits (59), Expect = 9.7
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = -1
Query: 412 IIDFMPEAHTLFTVVHMVLFGKPANITACLAGA 314
I F E T FTV+ V FG P + T C GA
Sbjct: 443 ISGFCIEVGTAFTVLICVKFGIPISSTHCTVGA 475
>Z81545-10|CAB04448.1| 170|Caenorhabditis elegans Hypothetical
protein F49H6.13 protein.
Length = 170
Score = 27.9 bits (59), Expect = 9.7
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -1
Query: 637 CLVICNFFAVFS 602
C ++CNFFAVFS
Sbjct: 15 CAIVCNFFAVFS 26
>AL031627-25|CAA20971.1| 170|Caenorhabditis elegans Hypothetical
protein F49H6.13 protein.
Length = 170
Score = 27.9 bits (59), Expect = 9.7
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -1
Query: 637 CLVICNFFAVFS 602
C ++CNFFAVFS
Sbjct: 15 CAIVCNFFAVFS 26
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,128,208
Number of Sequences: 27780
Number of extensions: 378746
Number of successful extensions: 1104
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1037
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1102
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -