Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_L20
(752 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0036 - 9950353-9950379,9950753-9950791,9951021-9951194,995... 61 1e-09
04_03_0035 - 9945522-9945557,9946413-9946598,9948217-9948313,994... 50 2e-06
05_07_0328 + 29286109-29286120,29286982-29287146,29288427-292885... 49 5e-06
05_03_0001 - 7269231-7269436,7269536-7270100,7270600-7270821,727... 32 0.56
07_03_0523 + 19030078-19031109 30 1.7
05_07_0248 - 28651807-28651908,28652001-28652061,28652164-286522... 30 1.7
04_04_0228 + 23764753-23765601 30 1.7
03_05_0337 - 23272845-23273271,23273318-23273526,23275615-23276298 30 1.7
11_06_0744 - 26850761-26850771,26850794-26850861,26851464-26851861 30 2.3
01_05_0801 + 25353708-25353914,25354307-25354429,25355035-253552... 30 2.3
10_01_0334 - 3680612-3681266,3682253-3682374 29 3.0
09_04_0408 + 17352110-17352619,17352709-17352834,17353036-173532... 29 3.0
06_03_0478 - 21259376-21259465,21259862-21259924,21260025-212600... 29 3.0
06_01_0022 - 218860-219053,219707-220010 29 3.0
04_04_0463 - 25397837-25399693,25402136-25402405 29 4.0
09_06_0266 - 21936234-21936282,21936771-21937033 29 5.2
01_01_0132 - 1197988-1198206,1198255-1198356,1198518-1198821,119... 29 5.2
11_03_0183 - 11310671-11313625,11314243-11314287,11314550-11314717 28 6.9
12_01_0204 + 1539859-1540158 28 9.2
05_04_0009 + 17102778-17102883,17103083-17103573 28 9.2
05_01_0384 + 2997465-2999777,2999960-3000035,3003027-3003102,300... 28 9.2
>04_03_0036 - 9950353-9950379,9950753-9950791,9951021-9951194,
9951287-9951415,9951782-9952012,9952655-9952732,
9953035-9953055,9953790-9953855,9953935-9954015,
9954148-9954920,9955461-9955654,9956723-9956817,
9958190-9958219,9958334-9958453,9959185-9959262,
9959428-9959505,9960459-9960488,9960614-9960739,
9961239-9961379,9963416-9963532,9963619-9963670,
9963759-9963890,9964668-9964720,9964816-9964911,
9965255-9965260,9965416-9965561,9966494-9966629,
9966885-9967038,9968017-9968154,9968268-9968614
Length = 1295
Score = 60.9 bits (141), Expect = 1e-09
Identities = 38/112 (33%), Positives = 60/112 (53%), Gaps = 2/112 (1%)
Frame = +1
Query: 79 ALLLRIPTLPALSGLRG--YIAIGTNYNYSEDITSRGRIIIYDIIDVVPEPGQPLTKNRF 252
AL +RI TL + +AIGT Y ED+ +RGR++++ ++N
Sbjct: 1164 ALTVRIVTLHNTTTKENETLLAIGTAYVLGEDVAARGRVLLFSFTK------SENSQNLV 1217
Query: 253 KEIYSKEQKGPVTALTQVLGYLISAVGQKIYIWQLKDNDLVGVAFIDTQIYV 408
E+YSKE KG V+A+ + G+L+ A G KI + + +L VAF D ++V
Sbjct: 1218 TEVYSKESKGAVSAVASLQGHLLIASGPKITLNKWTGAELTAVAFYDAPLHV 1269
>04_03_0035 -
9945522-9945557,9946413-9946598,9948217-9948313,
9948789-9949114
Length = 214
Score = 50.0 bits (114), Expect = 2e-06
Identities = 21/64 (32%), Positives = 39/64 (60%)
Frame = +1
Query: 424 VKNLILVADVYKSISLLRYQPAHRTLSLVSRDFRTAQIYDMEFMVDNTNLGFLVSEAEGN 603
VKN +L D++KSI L ++ LSL+++DF + + EF++D + L + S+++ N
Sbjct: 142 VKNFVLFGDIHKSIYFLSWKEQGSQLSLLAKDFGSLDCFATEFLIDGSTLSLVASDSDKN 201
Query: 604 FALF 615
L+
Sbjct: 202 VQLY 205
>05_07_0328 + 29286109-29286120,29286982-29287146,29288427-29288589,
29288625-29288903,29289047-29289122,29289725-29289787,
29292116-29292164,29292413-29292504,29293017-29293068,
29293209-29293271,29293382-29293431,29293941-29294016,
29294444-29294656,29294763-29294869,29294966-29295074,
29295489-29295689,29295773-29296033,29296154-29296171,
29296287-29296397,29296755-29297030,29297108-29297382,
29297814-29298165,29298371-29298655,29298715-29299261,
29301658-29301781,29301871-29301946,29302062-29302136,
29302300-29302353,29302833-29302892,29302977-29303093,
29303228-29303361,29303480-29303682,29303879-29303976,
29304358-29304461,29304537-29304702,29304803-29304925,
29305047-29305129,29305217-29305358,29305523-29305549,
29305784-29305854,29305930-29306518
Length = 2046
Score = 48.8 bits (111), Expect = 5e-06
Identities = 63/225 (28%), Positives = 102/225 (45%), Gaps = 21/225 (9%)
Frame = +1
Query: 130 YIAIGTNYNYSEDIT-SRGRIIIYDIIDVVPEPGQPLTKNRFKEIYSKEQKGPVTALTQV 306
Y +GT Y E+ S+GRI+++ + D R + I KE KG V +L
Sbjct: 1004 YYCVGTAYVLPEENEPSKGRILVFAVED-----------GRLQLIVEKETKGAVYSLNAF 1052
Query: 307 LGYLISAVGQKI--YIWQLKDNDLVGVAFIDTQIYVH-RMLAVK-----NLILVADVYKS 462
G L++A+ QKI Y W L+++ G + ++ H +LA+ + I+V D+ KS
Sbjct: 1053 NGKLLAAINQKIQLYKWMLRED---GSHELQSECGHHGHILALYTQTRGDFIVVGDLMKS 1109
Query: 463 ISLLRY---------QPAHRTLSLVSRDFRTAQIYDMEFMVDNTNLGFLVSEAEGNFALF 615
ISLL Y Q + ++RD+ + +E + D +G AE N+ +F
Sbjct: 1110 ISLLVYKLTFFFLFEQHEESAIEELARDYNANWMSAVEMLDDEIYIG-----AENNYNIF 1164
Query: 616 MYQ--PQARESYGGXRLIRKSDYHLGXQVHAMFRIN-VRSLPXSD 741
+ A RL +YHLG V+ + + V LP S+
Sbjct: 1165 TVRKNSDAATDEERGRLEVVGEYHLGEFVNRLRHGSLVMRLPDSE 1209
>05_03_0001 -
7269231-7269436,7269536-7270100,7270600-7270821,
7270913-7271155,7271227-7271481,7272017-7272370,
7273082-7273164,7273250-7273630,7273874-7274027
Length = 820
Score = 31.9 bits (69), Expect = 0.56
Identities = 24/75 (32%), Positives = 28/75 (37%), Gaps = 5/75 (6%)
Frame = +3
Query: 213 GPGARA-----AADQEPLQGDLLQGAEGSGDRAHAGARLPHIRRRTEDIHMAAEGQRPSG 377
GPGA A AD+E + GAE RA AG+ P ED E G
Sbjct: 40 GPGALALLESPTADREEGEAPRRSGAEQGARRAAAGSEKPEGSEEAEDEEFLVEEYESDG 99
Query: 378 RRVHRHADIRAPHAG 422
R + PH G
Sbjct: 100 EVCVRREAGKRPHRG 114
>07_03_0523 + 19030078-19031109
Length = 343
Score = 30.3 bits (65), Expect = 1.7
Identities = 26/70 (37%), Positives = 32/70 (45%), Gaps = 8/70 (11%)
Frame = +3
Query: 264 LQGAEGSGDRAHAGARLPH--IRRRTEDI-----HMAAEGQRPSGRRVHRHADIRAPHAG 422
+ G E S R AG RL +RR + I +MAA+G + V RH R H G
Sbjct: 246 MSGQEASAARRAAG-RLDSLDVRRNPQSIAAAIVYMAAQGSSGVRKSVRRHGRQRVDHQG 304
Query: 423 R-QEPHPGGR 449
R Q P P R
Sbjct: 305 RVQGPVPARR 314
>05_07_0248 -
28651807-28651908,28652001-28652061,28652164-28652270,
28652369-28652473,28652556-28652642,28652814-28652894,
28653083-28653155,28653243-28653355,28653439-28653532,
28653633-28653688,28653779-28653865,28653975-28654064,
28654178-28654348,28654752-28654871,28654981-28655193
Length = 519
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 24 YRILSVYLSDCFYIFNDHCFIITDSNSASLIR 119
YR++ + +S+CF + FI+T NSASL R
Sbjct: 118 YRLIDIPMSNCFNSGINKIFIMTQFNSASLNR 149
>04_04_0228 + 23764753-23765601
Length = 282
Score = 30.3 bits (65), Expect = 1.7
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 5/99 (5%)
Frame = +3
Query: 165 GYHF*GEDNNLRHNRRGPGARAAADQEPLQGDLLQGAEGSGDRAHAGARLP--HIRRRTE 338
GY F D + N GP A AD P +GD+++G + R A P H+ R +
Sbjct: 16 GYRFRPSDRQIIANYLGPMAIHGADSLPQRGDVVEGVDVFATRPAAIPFEPRRHVFGR-D 74
Query: 339 DIHMAAEGQRPS---GRRVHRHADIRAPHAGRQEPHPGG 446
++ G +P+ GR V A + P G + + GG
Sbjct: 75 EVRAYFFGDQPTDSRGREVPGGAWL--PCGGGDKAYSGG 111
>03_05_0337 - 23272845-23273271,23273318-23273526,23275615-23276298
Length = 439
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +3
Query: 324 RRRTEDIHMAAEGQRPSGRRVHRHADIRAPHAGRQEPH 437
R R E+ H A+ Q GRR R D+RA R H
Sbjct: 363 RLRVEEGHRVADHQHDDGRRAVRRGDVRALRRRRLPAH 400
>11_06_0744 - 26850761-26850771,26850794-26850861,26851464-26851861
Length = 158
Score = 29.9 bits (64), Expect = 2.3
Identities = 30/96 (31%), Positives = 37/96 (38%), Gaps = 11/96 (11%)
Frame = +3
Query: 198 RHNRRGPGARAAA--DQEPLQGDLLQGAE-----GSGDRAHAGARLPHIRRRTEDI---- 344
R RRG G RAA +E G G E G R G R RR+ E+
Sbjct: 8 RRRRRGGGRRAAGRRKEEEEAGRRKAGEEARRGAGKRKRRRGGGRRAAGRRKEEEEAGRR 67
Query: 345 HMAAEGQRPSGRRVHRHADIRAPHAGRQEPHPGGRR 452
E +R +G+R R R R+E GRR
Sbjct: 68 KAGEEARRGAGKRKRRRGGGRRAAGRRKEEEEAGRR 103
>01_05_0801 +
25353708-25353914,25354307-25354429,25355035-25355205,
25355303-25355392,25355497-25355583,25355664-25355719,
25355812-25355905,25356032-25356144,25356211-25356283,
25356603-25356683,25356865-25356951,25357031-25357135,
25357279-25357385,25357481-25357541,25357931-25358158,
25359720-25360677,25360816-25360997,25361237-25361326,
25361422-25361709,25361844-25362056,25362560-25362784
Length = 1212
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +3
Query: 24 YRILSVYLSDCFYIFNDHCFIITDSNSASLIR 119
YR++ + +S+CF + F++T NSASL R
Sbjct: 117 YRLIDIPMSNCFNSGINKIFVMTQFNSASLNR 148
>10_01_0334 - 3680612-3681266,3682253-3682374
Length = 258
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +3
Query: 213 GPGARAAADQEPLQGDLLQGAEGSGDRAHAGAR 311
G GA AAA E + G++ + AEGSG R R
Sbjct: 95 GAGAAAAASGEDVCGEVTEVAEGSGRRRERSRR 127
>09_04_0408 +
17352110-17352619,17352709-17352834,17353036-17353209,
17353669-17353830,17353998-17354140,17354835-17354910,
17355445-17355589,17355847-17355896,17356001-17356078,
17357153-17357314,17357406-17357669,17357929-17358033,
17358158-17358247,17358344-17358346
Length = 695
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +1
Query: 295 LTQVLGYLISAVGQKIYIWQLKDNDLVGVAFIDTQIYVHRM 417
+ + +GYL SA+ Q + + L DN LVG T + VH +
Sbjct: 136 IEEEIGYLKSALAQVVEL--LPDNSLVGFITFGTYVQVHEL 174
>06_03_0478 -
21259376-21259465,21259862-21259924,21260025-21260066,
21260180-21260461,21261084-21261587,21261973-21261981,
21262122-21262196,21262375-21262449,21262557-21263494,
21263577-21263607,21263694-21263979,21264691-21264905,
21265329-21265437,21265556-21265611,21265730-21265822,
21266348-21266393,21266496-21267221,21267489-21267550,
21267738-21268013,21268604-21268735,21268835-21268909
Length = 1394
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +3
Query: 291 RAHAGARLPHIRRRTEDIHMAAEGQRPSGRR--VHRH 395
R H R P RRR+ + +RPS RR VHRH
Sbjct: 389 REHTPPRTPGDRRRSSSVRAEKPLRRPSPRRDAVHRH 425
>06_01_0022 - 218860-219053,219707-220010
Length = 165
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/51 (35%), Positives = 22/51 (43%)
Frame = +3
Query: 543 YGVHGG*YESRFPGQRSRGELRAVHVPAAGQGELRRPXADTQERLPPGPXG 695
YG GG S P R+ + PA +LR+P T ERL P G
Sbjct: 8 YGRRGGAAPSYVPRPRAPNPSPSAPAPARPPQQLRKPVFTTVERLRPQSHG 58
>04_04_0463 - 25397837-25399693,25402136-25402405
Length = 708
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +3
Query: 585 QRSRGELRAVHVPAAGQGELRRPXADTQERLPPGPXGAR 701
+R+ G VHVP A +GE ++ + RLP GAR
Sbjct: 9 KRALGLGLCVHVPEAEEGEREDCSSERRRRLPAAASGAR 47
>09_06_0266 - 21936234-21936282,21936771-21937033
Length = 103
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -3
Query: 519 VPGDQRERPVRGLVAQQRDGLVDVGHQDEVLD 424
VP + +RPVRG+V D D G DE D
Sbjct: 64 VPETETKRPVRGVVGVAVDQETDYGSTDEARD 95
>01_01_0132 -
1197988-1198206,1198255-1198356,1198518-1198821,
1199221-1199292,1199384-1199420,1199527-1199585,
1199844-1200128,1200293-1200465,1201020-1201213,
1202245-1202374
Length = 524
Score = 28.7 bits (61), Expect = 5.2
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +1
Query: 343 YIWQLKDNDLV-GVAFIDTQIYVHRMLAVKNLILVADVYKSISLLRYQPAHRTLSLVS 513
Y + D+DL G I +IY +LA + V + + SI+ P R LSLVS
Sbjct: 423 YTCTVPDSDLCSGPRTITPEIYSQLVLAANDCKFVRNTFSSIASQYCPPIWRDLSLVS 480
>11_03_0183 - 11310671-11313625,11314243-11314287,11314550-11314717
Length = 1055
Score = 28.3 bits (60), Expect = 6.9
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Frame = +3
Query: 309 RLPHIRRRTEDIHMAAEGQRP---SGRRVHRHADIRAPHAGRQEPHPGG 446
R P RR ++ G+ P SGRR + A + GR+ P GG
Sbjct: 7 RTPSARRAARTRSASSGGETPTESSGRRRSKQAAVTGERGGRRRPAAGG 55
>12_01_0204 + 1539859-1540158
Length = 99
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/46 (32%), Positives = 18/46 (39%)
Frame = +3
Query: 192 NLRHNRRGPGARAAADQEPLQGDLLQGAEGSGDRAHAGARLPHIRR 329
NLRH P + P EG G AH G R+ +RR
Sbjct: 17 NLRHLEANPSSPTVTRGMPPNHAGSWNGEGQGGLAHFGGRVTRVRR 62
>05_04_0009 + 17102778-17102883,17103083-17103573
Length = 198
Score = 27.9 bits (59), Expect = 9.2
Identities = 23/68 (33%), Positives = 33/68 (48%)
Frame = +3
Query: 219 GARAAADQEPLQGDLLQGAEGSGDRAHAGARLPHIRRRTEDIHMAAEGQRPSGRRVHRHA 398
GAR AA + + + + A G+GD + A A+ P R+T +RP GR A
Sbjct: 15 GARRAAASD-ISDNAVLSAAGAGDESFAAAKAPAPGRKTA---YRGIRRRPWGRWA---A 67
Query: 399 DIRAPHAG 422
+IR P G
Sbjct: 68 EIRDPRKG 75
>05_01_0384 +
2997465-2999777,2999960-3000035,3003027-3003102,
3003571-3004442,3004592-3004773,3005206-3005295,
3005388-3005675,3005776-3005997,3006053-3006133,
3006634-3006861
Length = 1475
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +3
Query: 33 LSVYLSD--CFYIFNDHCFIITDSNSASLIRSPRLHSD 140
L+++ SD C + F D CFI T R PR+ +D
Sbjct: 275 LTLFCSDDECPWAFGDRCFIATPPRHRRRRRQPRVPTD 312
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,114,973
Number of Sequences: 37544
Number of extensions: 385970
Number of successful extensions: 1357
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1319
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1355
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2004270760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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