Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_L20
         (752 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    26   1.1  
DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfat...    24   5.8  
AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsiv...    24   5.8  
AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    23   7.7  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    23   7.7  

>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 14/55 (25%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
 Frame = -3

Query: 582  QETEIRIIHHELHIVYLRGPEVPGDQRERPVRGLVAQQRDG--LVDVGHQDEVLD 424
            QET+  + H +L +  L+  E+P +  + P++    ++ D   L D+ +Q  +L+
Sbjct: 1022 QETKDTLPHWQLQLKPLKLHEIPEEPPQEPLKEYTEEELDSYKLPDLQYQISILE 1076


>DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfatase
           precursor protein.
          Length = 525

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
 Frame = -3

Query: 645 VALPGLRLVHEQREVPLGFADQETEIRIIHHELHIVYLRG-PEVPGDQRERPVRGLVAQQ 469
           +  PG++  H+Q+       D   E+  ++  L  V L G P VP    +RP +     +
Sbjct: 352 IRAPGMQTHHQQK------IDNVVELLDLYSTL--VDLAGLPPVPRCDEQRPHKATTCTE 403

Query: 468 RDGLVDVGHQDEVLDGQH 415
              LV +  ++   DG++
Sbjct: 404 GKSLVPLMERNSTADGEN 421


>AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsive
           protein 2 protein.
          Length = 439

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 64  FSTITALLLRIPTLPALSGLRGY 132
           + T+T L  + P+L  L GL GY
Sbjct: 90  YRTVTQLKSKYPSLKVLLGLGGY 112


>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 13/45 (28%), Positives = 21/45 (46%)
 Frame = +1

Query: 97  PTLPALSGLRGYIAIGTNYNYSEDITSRGRIIIYDIIDVVPEPGQ 231
           P LP  +G +GY      Y ++ D +     + Y+I D + E  Q
Sbjct: 507 PFLPYFTGYKGY---SVQYAHNVDASRYAYKLAYEIADELQEISQ 548


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 13/45 (28%), Positives = 21/45 (46%)
 Frame = +1

Query: 97  PTLPALSGLRGYIAIGTNYNYSEDITSRGRIIIYDIIDVVPEPGQ 231
           P LP  +G +GY      Y ++ D +     + Y+I D + E  Q
Sbjct: 507 PFLPYFTGYKGY---SVQYAHNVDASRYAYKLAYEIADELQEISQ 548


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 670,341
Number of Sequences: 2352
Number of extensions: 14323
Number of successful extensions: 20
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77755161
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)