Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_L20
         (752 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051896-1|AAK93320.1| 1420|Drosophila melanogaster LD38533p pro...   302   4e-82
AF241366-1|AAF98388.1|  813|Drosophila melanogaster cleavage and...   302   4e-82
AE013599-1901|AAF58240.1| 1455|Drosophila melanogaster CG10110-P...   302   4e-82
AE013599-1900|AAM68553.1| 1420|Drosophila melanogaster CG10110-P...   302   4e-82
AF132145-1|AAD33592.1| 1140|Drosophila melanogaster damage-speci...    45   1e-04
AE014297-1629|AAF54901.1| 1140|Drosophila melanogaster CG7769-PA...    45   1e-04
Z98269-5|CAB10973.1| 1741|Drosophila melanogaster EG:87B1.2,FBgn...    30   3.9  
U40214-1|AAA91230.1| 1768|Drosophila melanogaster parallel siste...    30   3.9  
AY119606-1|AAM50260.1| 1108|Drosophila melanogaster LD29979p pro...    30   3.9  
AE014298-345|AAF45735.2| 1092|Drosophila melanogaster CG3707-PB,...    30   3.9  
AE014298-344|AAF45734.1| 1741|Drosophila melanogaster CG3707-PA,...    30   3.9  
BT011090-1|AAR82756.2| 1051|Drosophila melanogaster RE48845p pro...    29   5.2  
AY069083-1|AAL39228.1|  371|Drosophila melanogaster GH09856p pro...    29   5.2  
AF181642-1|AAD55428.1| 1073|Drosophila melanogaster BcDNA.GH1077...    29   5.2  
AE014296-1379|AAF50481.1| 1051|Drosophila melanogaster CG7972-PA...    29   5.2  
AE014296-765|AAF47839.2| 1073|Drosophila melanogaster CG14992-PA...    29   5.2  
AE014134-142|AAS64630.1|  371|Drosophila melanogaster CG3159-PB,...    29   5.2  
BT003632-1|AAO39636.1|  451|Drosophila melanogaster AT22207p pro...    29   9.0  
AE014296-742|AAN11578.2|  451|Drosophila melanogaster CG32258-PA...    29   9.0  
AE014296-741|AAS64969.1|  460|Drosophila melanogaster CG32258-PB...    29   9.0  

>AY051896-1|AAK93320.1| 1420|Drosophila melanogaster LD38533p protein.
          Length = 1420

 Score =  302 bits (741), Expect = 4e-82
 Identities = 134/200 (67%), Positives = 172/200 (86%)
 Frame = +1

Query: 115  SGLRGYIAIGTNYNYSEDITSRGRIIIYDIIDVVPEPGQPLTKNRFKEIYSKEQKGPVTA 294
            SGL+ Y+ IGTN+NYSEDITSRG I IYDII+VVPEPG+P+TK + KEI+ KEQKGPV+A
Sbjct: 1093 SGLKEYLCIGTNFNYSEDITSRGNIHIYDIIEVVPEPGKPMTKFKIKEIFKKEQKGPVSA 1152

Query: 295  LTQVLGYLISAVGQKIYIWQLKDNDLVGVAFIDTQIYVHRMLAVKNLILVADVYKSISLL 474
            ++ VLG+L++ +GQKIYIWQL+D DL+GVAFIDT IYVH+++ VK+LI +ADVYKSISLL
Sbjct: 1153 ISDVLGFLVTGLGQKIYIWQLRDGDLIGVAFIDTNIYVHQIITVKSLIFIADVYKSISLL 1212

Query: 475  RYQPAHRTLSLVSRDFRTAQIYDMEFMVDNTNLGFLVSEAEGNFALFMYQPQARESYGGX 654
            R+Q  +RTLSL SRDF   ++Y +EFMVDN+NLGFLV++AE N  ++MYQP+ARES GG 
Sbjct: 1213 RFQEEYRTLSLASRDFNPLEVYGIEFMVDNSNLGFLVTDAERNIIVYMYQPEARESLGGQ 1272

Query: 655  RLIRKSDYHLGXQVHAMFRI 714
            +L+RK+DYHLG  V+ MFR+
Sbjct: 1273 KLLRKADYHLGQVVNTMFRV 1292


>AF241366-1|AAF98388.1|  813|Drosophila melanogaster cleavage and
            polyadenylation specificityfactor protein.
          Length = 813

 Score =  302 bits (741), Expect = 4e-82
 Identities = 134/200 (67%), Positives = 172/200 (86%)
 Frame = +1

Query: 115  SGLRGYIAIGTNYNYSEDITSRGRIIIYDIIDVVPEPGQPLTKNRFKEIYSKEQKGPVTA 294
            SGL+ Y+ IGTN+NYSEDITSRG I IYDII+VVPEPG+P+TK + KEI+ KEQKGPV+A
Sbjct: 486  SGLKEYLCIGTNFNYSEDITSRGNIHIYDIIEVVPEPGKPMTKFKIKEIFKKEQKGPVSA 545

Query: 295  LTQVLGYLISAVGQKIYIWQLKDNDLVGVAFIDTQIYVHRMLAVKNLILVADVYKSISLL 474
            ++ VLG+L++ +GQKIYIWQL+D DL+GVAFIDT IYVH+++ VK+LI +ADVYKSISLL
Sbjct: 546  ISDVLGFLVTGLGQKIYIWQLRDGDLIGVAFIDTNIYVHQIITVKSLIFIADVYKSISLL 605

Query: 475  RYQPAHRTLSLVSRDFRTAQIYDMEFMVDNTNLGFLVSEAEGNFALFMYQPQARESYGGX 654
            R+Q  +RTLSL SRDF   ++Y +EFMVDN+NLGFLV++AE N  ++MYQP+ARES GG 
Sbjct: 606  RFQEEYRTLSLASRDFNPLEVYGIEFMVDNSNLGFLVTDAERNIIVYMYQPEARESLGGQ 665

Query: 655  RLIRKSDYHLGXQVHAMFRI 714
            +L+RK+DYHLG  V+ MFR+
Sbjct: 666  KLLRKADYHLGQVVNTMFRV 685


>AE013599-1901|AAF58240.1| 1455|Drosophila melanogaster CG10110-PA,
            isoform A protein.
          Length = 1455

 Score =  302 bits (741), Expect = 4e-82
 Identities = 134/200 (67%), Positives = 172/200 (86%)
 Frame = +1

Query: 115  SGLRGYIAIGTNYNYSEDITSRGRIIIYDIIDVVPEPGQPLTKNRFKEIYSKEQKGPVTA 294
            SGL+ Y+ IGTN+NYSEDITSRG I IYDII+VVPEPG+P+TK + KEI+ KEQKGPV+A
Sbjct: 1128 SGLKEYLCIGTNFNYSEDITSRGNIHIYDIIEVVPEPGKPMTKFKIKEIFKKEQKGPVSA 1187

Query: 295  LTQVLGYLISAVGQKIYIWQLKDNDLVGVAFIDTQIYVHRMLAVKNLILVADVYKSISLL 474
            ++ VLG+L++ +GQKIYIWQL+D DL+GVAFIDT IYVH+++ VK+LI +ADVYKSISLL
Sbjct: 1188 ISDVLGFLVTGLGQKIYIWQLRDGDLIGVAFIDTNIYVHQIITVKSLIFIADVYKSISLL 1247

Query: 475  RYQPAHRTLSLVSRDFRTAQIYDMEFMVDNTNLGFLVSEAEGNFALFMYQPQARESYGGX 654
            R+Q  +RTLSL SRDF   ++Y +EFMVDN+NLGFLV++AE N  ++MYQP+ARES GG 
Sbjct: 1248 RFQEEYRTLSLASRDFNPLEVYGIEFMVDNSNLGFLVTDAERNIIVYMYQPEARESLGGQ 1307

Query: 655  RLIRKSDYHLGXQVHAMFRI 714
            +L+RK+DYHLG  V+ MFR+
Sbjct: 1308 KLLRKADYHLGQVVNTMFRV 1327


>AE013599-1900|AAM68553.1| 1420|Drosophila melanogaster CG10110-PB,
            isoform B protein.
          Length = 1420

 Score =  302 bits (741), Expect = 4e-82
 Identities = 134/200 (67%), Positives = 172/200 (86%)
 Frame = +1

Query: 115  SGLRGYIAIGTNYNYSEDITSRGRIIIYDIIDVVPEPGQPLTKNRFKEIYSKEQKGPVTA 294
            SGL+ Y+ IGTN+NYSEDITSRG I IYDII+VVPEPG+P+TK + KEI+ KEQKGPV+A
Sbjct: 1093 SGLKEYLCIGTNFNYSEDITSRGNIHIYDIIEVVPEPGKPMTKFKIKEIFKKEQKGPVSA 1152

Query: 295  LTQVLGYLISAVGQKIYIWQLKDNDLVGVAFIDTQIYVHRMLAVKNLILVADVYKSISLL 474
            ++ VLG+L++ +GQKIYIWQL+D DL+GVAFIDT IYVH+++ VK+LI +ADVYKSISLL
Sbjct: 1153 ISDVLGFLVTGLGQKIYIWQLRDGDLIGVAFIDTNIYVHQIITVKSLIFIADVYKSISLL 1212

Query: 475  RYQPAHRTLSLVSRDFRTAQIYDMEFMVDNTNLGFLVSEAEGNFALFMYQPQARESYGGX 654
            R+Q  +RTLSL SRDF   ++Y +EFMVDN+NLGFLV++AE N  ++MYQP+ARES GG 
Sbjct: 1213 RFQEEYRTLSLASRDFNPLEVYGIEFMVDNSNLGFLVTDAERNIIVYMYQPEARESLGGQ 1272

Query: 655  RLIRKSDYHLGXQVHAMFRI 714
            +L+RK+DYHLG  V+ MFR+
Sbjct: 1273 KLLRKADYHLGQVVNTMFRV 1292


>AF132145-1|AAD33592.1| 1140|Drosophila melanogaster damage-specific
            DNA binding proteinDDBa p127 subunit protein.
          Length = 1140

 Score = 44.8 bits (101), Expect = 1e-04
 Identities = 39/159 (24%), Positives = 72/159 (45%), Gaps = 2/159 (1%)
 Frame = +1

Query: 241  KNRFKEIYSKEQKGPVTALTQVLGYLISAVGQ--KIYIWQLKDNDLVGVAFIDTQIYVHR 414
            +N+  ++   +  G   AL +  G +++ +G   ++Y W   + +L     I   I    
Sbjct: 856  ENKLTQVAETKVDGTCYALVEFNGKVLAGIGSFVRLYEWT-NEKELRMECNIQNMIAALF 914

Query: 415  MLAVKNLILVADVYKSISLLRYQPAHRTLSLVSRDFRTAQIYDMEFMVDNTNLGFLVSEA 594
            + A  + ILV D+ +SI+LL+++        ++RD     +  +E + D+T   FL SE 
Sbjct: 915  LKAKGDFILVGDLMRSITLLQHKQMEGIFVEIARDCEPKWMRAVEILDDDT---FLGSET 971

Query: 595  EGNFALFMYQPQARESYGGXRLIRKSDYHLGXQVHAMFR 711
             GN  +      A        L   + +HLG  V+ +FR
Sbjct: 972  NGNLFVCQKDSAATTDEERQLLPELARFHLGDTVN-VFR 1009


>AE014297-1629|AAF54901.1| 1140|Drosophila melanogaster CG7769-PA
            protein.
          Length = 1140

 Score = 44.8 bits (101), Expect = 1e-04
 Identities = 39/159 (24%), Positives = 72/159 (45%), Gaps = 2/159 (1%)
 Frame = +1

Query: 241  KNRFKEIYSKEQKGPVTALTQVLGYLISAVGQ--KIYIWQLKDNDLVGVAFIDTQIYVHR 414
            +N+  ++   +  G   AL +  G +++ +G   ++Y W   + +L     I   I    
Sbjct: 856  ENKLTQVAETKVDGTCYALVEFNGKVLAGIGSFVRLYEWT-NEKELRMECNIQNMIAALF 914

Query: 415  MLAVKNLILVADVYKSISLLRYQPAHRTLSLVSRDFRTAQIYDMEFMVDNTNLGFLVSEA 594
            + A  + ILV D+ +SI+LL+++        ++RD     +  +E + D+T   FL SE 
Sbjct: 915  LKAKGDFILVGDLMRSITLLQHKQMEGIFVEIARDCEPKWMRAVEILDDDT---FLGSET 971

Query: 595  EGNFALFMYQPQARESYGGXRLIRKSDYHLGXQVHAMFR 711
             GN  +      A        L   + +HLG  V+ +FR
Sbjct: 972  NGNLFVCQKDSAATTDEERQLLPELARFHLGDTVN-VFR 1009


>Z98269-5|CAB10973.1| 1741|Drosophila melanogaster
           EG:87B1.2,FBgn0004655;wapl protein.
          Length = 1741

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 18/67 (26%), Positives = 27/67 (40%)
 Frame = +3

Query: 213 GPGARAAADQEPLQGDLLQGAEGSGDRAHAGARLPHIRRRTEDIHMAAEGQRPSGRRVHR 392
           G GA +A  + PLQ D+L    G   R + G   P      +         R  GR+ + 
Sbjct: 658 GTGAASAVPETPLQEDILAVLRGEVPRLN-GNTDPEPTEEEDQQQQPKRATRGRGRKANN 716

Query: 393 HADIRAP 413
           + D+  P
Sbjct: 717 NVDVTPP 723


>U40214-1|AAA91230.1| 1768|Drosophila melanogaster parallel sister
           chromatids protein protein.
          Length = 1768

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 18/67 (26%), Positives = 27/67 (40%)
 Frame = +3

Query: 213 GPGARAAADQEPLQGDLLQGAEGSGDRAHAGARLPHIRRRTEDIHMAAEGQRPSGRRVHR 392
           G GA +A  + PLQ D+L    G   R + G   P      +         R  GR+ + 
Sbjct: 658 GTGAASAVPETPLQEDILAVLRGEVPRLN-GNTDPEPTEEEDQQQQPKRATRGRGRKANN 716

Query: 393 HADIRAP 413
           + D+  P
Sbjct: 717 NVDVTPP 723


>AY119606-1|AAM50260.1| 1108|Drosophila melanogaster LD29979p
           protein.
          Length = 1108

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 18/67 (26%), Positives = 27/67 (40%)
 Frame = +3

Query: 213 GPGARAAADQEPLQGDLLQGAEGSGDRAHAGARLPHIRRRTEDIHMAAEGQRPSGRRVHR 392
           G GA +A  + PLQ D+L    G   R + G   P      +         R  GR+ + 
Sbjct: 658 GTGAASAVPETPLQEDILAVLRGEVPRLN-GNTDPEPTEEEDQQQQPKRATRGRGRKANN 716

Query: 393 HADIRAP 413
           + D+  P
Sbjct: 717 NVDVTPP 723


>AE014298-345|AAF45735.2| 1092|Drosophila melanogaster CG3707-PB,
           isoform B protein.
          Length = 1092

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 18/67 (26%), Positives = 27/67 (40%)
 Frame = +3

Query: 213 GPGARAAADQEPLQGDLLQGAEGSGDRAHAGARLPHIRRRTEDIHMAAEGQRPSGRRVHR 392
           G GA +A  + PLQ D+L    G   R + G   P      +         R  GR+ + 
Sbjct: 9   GTGAASAVPETPLQEDILAVLRGEVPRLN-GNTDPEPTEEEDQQQQPKRATRGRGRKANN 67

Query: 393 HADIRAP 413
           + D+  P
Sbjct: 68  NVDVTPP 74


>AE014298-344|AAF45734.1| 1741|Drosophila melanogaster CG3707-PA,
           isoform A protein.
          Length = 1741

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 18/67 (26%), Positives = 27/67 (40%)
 Frame = +3

Query: 213 GPGARAAADQEPLQGDLLQGAEGSGDRAHAGARLPHIRRRTEDIHMAAEGQRPSGRRVHR 392
           G GA +A  + PLQ D+L    G   R + G   P      +         R  GR+ + 
Sbjct: 658 GTGAASAVPETPLQEDILAVLRGEVPRLN-GNTDPEPTEEEDQQQQPKRATRGRGRKANN 716

Query: 393 HADIRAP 413
           + D+  P
Sbjct: 717 NVDVTPP 723


>BT011090-1|AAR82756.2| 1051|Drosophila melanogaster RE48845p protein.
          Length = 1051

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 30/120 (25%), Positives = 45/120 (37%), Gaps = 1/120 (0%)
 Frame = +1

Query: 319  ISAVGQKIYIWQLKDNDLVGVAFIDTQIYVHRMLAVKNLILVADVYKSISLLRYQPAHRT 498
            +   G+ I I Q KDN LVG             L     + +  +  S+  L      R 
Sbjct: 644  LGEAGESILIAQSKDNLLVGQMLFSPMDKALSSLDQNEAVGLQSLILSVVGLNLAECRRD 703

Query: 499  LS-LVSRDFRTAQIYDMEFMVDNTNLGFLVSEAEGNFALFMYQPQARESYGGXRLIRKSD 675
            L+ LV+    + Q   +E  V+   L  L  E   N  L + +PQA+       +I   D
Sbjct: 704  LNRLVNSTLLSVQAKSLEVAVNEIVLRIL-REMFKNKVLQLAEPQAKSKINSSDIITSQD 762


>AY069083-1|AAL39228.1|  371|Drosophila melanogaster GH09856p
           protein.
          Length = 371

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 12/27 (44%), Positives = 13/27 (48%)
 Frame = -2

Query: 709 GTWRAPXGPGGSRSCVSAXGLRSSPWP 629
           G WRAP GP     C+   G RS   P
Sbjct: 335 GIWRAPYGPSDLHGCLHELGQRSECCP 361


>AF181642-1|AAD55428.1| 1073|Drosophila melanogaster BcDNA.GH10777
           protein.
          Length = 1073

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 11/34 (32%), Positives = 22/34 (64%)
 Frame = +1

Query: 346 IWQLKDNDLVGVAFIDTQIYVHRMLAVKNLILVA 447
           IW      + G+A+++ + ++HR LA +N++L A
Sbjct: 227 IWNWSVQIVTGMAYLEQKRFLHRDLACRNVLLAA 260


>AE014296-1379|AAF50481.1| 1051|Drosophila melanogaster CG7972-PA
            protein.
          Length = 1051

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 30/120 (25%), Positives = 45/120 (37%), Gaps = 1/120 (0%)
 Frame = +1

Query: 319  ISAVGQKIYIWQLKDNDLVGVAFIDTQIYVHRMLAVKNLILVADVYKSISLLRYQPAHRT 498
            +   G+ I I Q KDN LVG             L     + +  +  S+  L      R 
Sbjct: 644  LGEAGESILIAQSKDNLLVGQMLFSPMDKALSSLDQNEAVGLQSLILSVVGLNLAECRRD 703

Query: 499  LS-LVSRDFRTAQIYDMEFMVDNTNLGFLVSEAEGNFALFMYQPQARESYGGXRLIRKSD 675
            L+ LV+    + Q   +E  V+   L  L  E   N  L + +PQA+       +I   D
Sbjct: 704  LNRLVNSTLLSVQAKSLEVAVNEIVLRIL-REMFKNKVLQLAEPQAKSKINSSDIITSQD 762


>AE014296-765|AAF47839.2| 1073|Drosophila melanogaster CG14992-PA
           protein.
          Length = 1073

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 11/34 (32%), Positives = 22/34 (64%)
 Frame = +1

Query: 346 IWQLKDNDLVGVAFIDTQIYVHRMLAVKNLILVA 447
           IW      + G+A+++ + ++HR LA +N++L A
Sbjct: 227 IWNWSVQIVTGMAYLEQKRFLHRDLACRNVLLAA 260


>AE014134-142|AAS64630.1|  371|Drosophila melanogaster CG3159-PB,
           isoform B protein.
          Length = 371

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 12/27 (44%), Positives = 13/27 (48%)
 Frame = -2

Query: 709 GTWRAPXGPGGSRSCVSAXGLRSSPWP 629
           G WRAP GP     C+   G RS   P
Sbjct: 335 GIWRAPYGPSDLHGCLHELGQRSECCP 361


>BT003632-1|AAO39636.1|  451|Drosophila melanogaster AT22207p
           protein.
          Length = 451

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 15/59 (25%), Positives = 27/59 (45%)
 Frame = -1

Query: 656 RWPP*LSLACGWYMNSAKFPSASLTRKPRFVLSTMNSISYICAVLKSLETSESVLCAGW 480
           +WP    +A  W +  AK P   L ++ R +   +N I+ +      +E   S+L  G+
Sbjct: 153 KWP---EIAQSWQLVEAKLPPLKLPKERRSLAQHINMITIVATTCSLVEHIMSMLSMGY 208


>AE014296-742|AAN11578.2|  451|Drosophila melanogaster CG32258-PA,
           isoform A protein.
          Length = 451

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 15/59 (25%), Positives = 27/59 (45%)
 Frame = -1

Query: 656 RWPP*LSLACGWYMNSAKFPSASLTRKPRFVLSTMNSISYICAVLKSLETSESVLCAGW 480
           +WP    +A  W +  AK P   L ++ R +   +N I+ +      +E   S+L  G+
Sbjct: 153 KWP---EIAQSWQLVEAKLPPLKLPKERRSLAQHINMITIVATTCSLVEHIMSMLSMGY 208


>AE014296-741|AAS64969.1|  460|Drosophila melanogaster CG32258-PB,
           isoform B protein.
          Length = 460

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 15/59 (25%), Positives = 27/59 (45%)
 Frame = -1

Query: 656 RWPP*LSLACGWYMNSAKFPSASLTRKPRFVLSTMNSISYICAVLKSLETSESVLCAGW 480
           +WP    +A  W +  AK P   L ++ R +   +N I+ +      +E   S+L  G+
Sbjct: 162 KWP---EIAQSWQLVEAKLPPLKLPKERRSLAQHINMITIVATTCSLVEHIMSMLSMGY 217


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,451,128
Number of Sequences: 53049
Number of extensions: 623628
Number of successful extensions: 2041
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2038
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3437745267
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)