BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_L18
(844 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY391745-1|AAR28995.1| 460|Anopheles gambiae putative GPCR prot... 26 1.6
AF457551-1|AAL68781.1| 406|Anopheles gambiae calreticulin protein. 23 8.8
>AY391745-1|AAR28995.1| 460|Anopheles gambiae putative GPCR
protein.
Length = 460
Score = 25.8 bits (54), Expect = 1.6
Identities = 13/51 (25%), Positives = 24/51 (47%)
Frame = -3
Query: 779 NLLXMTIFCEKTITKLTRSINNLTFNHSQHCQESINYITQYIMYQVHMYSQ 627
N+L + +F + KL+ S S C ++T +QVH+Y++
Sbjct: 57 NILSVLVFFNTKLKKLSSSYYLAALGISDTCYLVGLFVTWLSFFQVHIYTR 107
>AF457551-1|AAL68781.1| 406|Anopheles gambiae calreticulin protein.
Length = 406
Score = 23.4 bits (48), Expect = 8.8
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +3
Query: 270 AGFSYSDANKAKGITWNDDTLFEYLENPKKYIP 368
AG Y+DA KG+ + D F L N K+ P
Sbjct: 50 AGKFYNDAEADKGLQTSQDARFYALSN--KFTP 80
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 889,702
Number of Sequences: 2352
Number of extensions: 19350
Number of successful extensions: 22
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 89305416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -