Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_L17
         (793 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    27   0.13 
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    27   0.13 
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    27   0.13 
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    27   0.13 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    25   0.52 
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    25   0.69 
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    25   0.69 
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    24   1.6  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   2.1  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   3.7  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    22   4.9  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   6.5  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   6.5  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   8.5  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 27.5 bits (58), Expect = 0.13
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -2

Query: 288 NDFQAVSDIVLMVTRFLNKFIYLFGEFFC 202
           ND  A+   VL++  F + F Y+FG+F C
Sbjct: 373 NDMTAI--YVLLINIFASYFAYIFGKFAC 399


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 27.5 bits (58), Expect = 0.13
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -2

Query: 288 NDFQAVSDIVLMVTRFLNKFIYLFGEFFC 202
           ND  A+   VL++  F + F Y+FG+F C
Sbjct: 373 NDMTAI--YVLLINIFASYFAYIFGKFAC 399


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 27.5 bits (58), Expect = 0.13
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -2

Query: 288 NDFQAVSDIVLMVTRFLNKFIYLFGEFFC 202
           ND  A+   VL++  F + F Y+FG+F C
Sbjct: 373 NDMTAI--YVLLINIFASYFAYIFGKFAC 399


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 27.5 bits (58), Expect = 0.13
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -2

Query: 288 NDFQAVSDIVLMVTRFLNKFIYLFGEFFC 202
           ND  A+   VL++  F + F Y+FG+F C
Sbjct: 373 NDMTAI--YVLLINIFASYFAYIFGKFAC 399


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 25.4 bits (53), Expect = 0.52
 Identities = 17/71 (23%), Positives = 35/71 (49%)
 Frame = -2

Query: 522 FTFNFLVQIFIILMFFNKYHDASSHCTHGGTDILPTWSVTVLDVLLLANGR*VTHDFYG* 343
           F   F + +F+IL+++    +  +  T+G      T++  ++ V+ L+     T  F+G 
Sbjct: 324 FIILFYLSVFVILVYYASLDETPNPVTNGKLYNFNTFAKLLILVVSLSG----TFGFFGT 379

Query: 342 NVSSKENHALF 310
           ++ S  N A F
Sbjct: 380 HILSYINKASF 390


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 25.0 bits (52), Expect = 0.69
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +1

Query: 22  CVLHVLTILTXSYXSKSEIMGQ 87
           C+L +LT +  SY S +EIM Q
Sbjct: 285 CLLILLTTIVASYGSVTEIMDQ 306


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 25.0 bits (52), Expect = 0.69
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +1

Query: 22  CVLHVLTILTXSYXSKSEIMGQ 87
           C+L +LT +  SY S +EIM Q
Sbjct: 285 CLLILLTTIVASYGSVTEIMDQ 306


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +1

Query: 565 SYLVLKLNSKTFKLINSYILV 627
           +YL+L   + T+ ++N Y+LV
Sbjct: 18  NYLILSNKNNTYLVLNKYLLV 38


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = -2

Query: 273 VSDIVLMVTRFLNKFIYLFGEFFCGHRFRYYTTMFD 166
           +S + L+    +  F+Y F  F  G  F ++T +FD
Sbjct: 128 ISILELVAVHLVLAFLYSFDLFANGITFGWHTYIFD 163


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -2

Query: 720 YLNVYFYQVWYLTATME*LYCNVQK 646
           YLN++F   WY   T +  Y ++ K
Sbjct: 21  YLNIFFITPWYDFPTNQKYYPSLAK 45


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 537 TEQFYFTFNFLVQIFIILMF 478
           T  F+F   F V IF++L+F
Sbjct: 185 TTLFFFNRTFGVPIFLVLVF 204


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 469 LVKEHEDYKDLYEEVKSEIKL 531
           L ++ + YK  YE+    IKL
Sbjct: 416 LAEDKDGYKKFYEQFSKNIKL 436


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 7/26 (26%), Positives = 13/26 (50%)
 Frame = -2

Query: 531 QFYFTFNFLVQIFIILMFFNKYHDAS 454
           Q  F F + + +F +   +   H+AS
Sbjct: 142 QLVFVFCYFIYLFTVYYIYYSVHEAS 167


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 261 LYQKRPENRSEAVTSG 308
           LY + P N  +AVTSG
Sbjct: 346 LYGRTPPNPLDAVTSG 361


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,250
Number of Sequences: 336
Number of extensions: 3963
Number of successful extensions: 15
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21480183
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)