Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_L17
         (793 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    24   1.9  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   5.7  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    22   5.7  

>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +1

Query: 262 YIRNGLKIVQKQLRLGEKGMVFFAGDISPIEIMCHLPAVCE 384
           ++R G K +  +LRL    + F  G   P E +C LP  CE
Sbjct: 555 WVRVG-KYLSGELRLNMSAIQFKLGHPEPPESVCSLP--CE 592


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 7/32 (21%)
 Frame = -2

Query: 276 AVSDIVLMVTRF-------LNKFIYLFGEFFC 202
           AVSD++L+++          + F Y+FGE FC
Sbjct: 96  AVSDLLLLISGLPPEIYYIWSHFPYVFGEAFC 127


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 442 GTMRGCIMVLVKEHEDYKDLYEEVKSE 522
           GT +  I+V        KD+YE+ K+E
Sbjct: 44  GTTKDLILVKKSTAHFVKDIYEKYKNE 70


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,327
Number of Sequences: 438
Number of extensions: 4952
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25003662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)