Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_L16
         (534 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    23   1.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   3.0  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    21   5.2  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   6.8  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   6.8  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   6.8  

>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +2

Query: 437 INRLMSAMFIAMDR*HWCTVMKXRTFL 517
           +N   S  FI + + HW T+MK  +F+
Sbjct: 124 LNFFGSIQFIIISK-HWVTIMKEWSFM 149


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +1

Query: 67  VKNF*HSEENGYFLSXSF 120
           VKNF HS  + +FLS  F
Sbjct: 369 VKNFRHSVRSVFFLSEIF 386


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -2

Query: 482 VTCPSL*TLQTSVGLWESSTKNTTSSSGCK 393
           V CP     +T + +   STK +T S GCK
Sbjct: 11  VLCPECENPETELLV---STKRSTISQGCK 37


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 5/7 (71%), Positives = 7/7 (100%)
 Frame = +2

Query: 416 YFLCWTP 436
           +F+CWTP
Sbjct: 284 FFVCWTP 290


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 5/7 (71%), Positives = 7/7 (100%)
 Frame = +2

Query: 416 YFLCWTP 436
           +F+CWTP
Sbjct: 284 FFVCWTP 290


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = +3

Query: 357 GELRRYYRPGRYLTARRGC 413
           G  RR  RPG   T R GC
Sbjct: 39  GGRRRAARPGVVTTPRWGC 57


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,158
Number of Sequences: 336
Number of extensions: 2451
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12992348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)