Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_L16
         (534 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0156 + 1188143-1189957                                           36   0.021
11_01_0158 + 1307648-1309462                                           36   0.021
08_01_0033 + 244930-245105,245297-245344,245835-246539,246652-24...    28   5.4  
03_03_0209 - 15461255-15461542,15461666-15461764,15461868-154619...    28   5.4  
12_01_0818 + 7524549-7524747,7524855-7525863,7525964-7526108,752...    27   7.2  
11_01_0638 + 5106962-5107553,5108107-5108303,5108955-5110196           27   7.2  
04_04_1696 + 35448667-35449641,35449726-35450562,35450667-354510...    27   9.5  

>12_01_0156 + 1188143-1189957
          Length = 604

 Score = 35.9 bits (79), Expect = 0.021
 Identities = 24/102 (23%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
 Frame = +1

Query: 211 DVDAICTCKILQGLFKSDNISYTLVPVGGISELKTAY-XXXXXXXXXXXXXXCGGTIDLV 387
           D DA+C  K+L  +  +D+I +++ PV   +   +                  G   DL 
Sbjct: 37  DADALCALKVLTHVLSADSIRFSIYPVASAAAAASLLASFSASQPLCLLLINWGAHRDLR 96

Query: 388 DILQPEEDVVFFVLDSHKPTDVCNV-YSDGQVTLVYRDEXEN 510
            +L P      FV+DSH+P  + N+  ++ +V +++  + E+
Sbjct: 97  AVLPPA--ATAFVVDSHRPIHLHNLSAANDRVVVLFTTDDEH 136


>11_01_0158 + 1307648-1309462
          Length = 604

 Score = 35.9 bits (79), Expect = 0.021
 Identities = 24/102 (23%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
 Frame = +1

Query: 211 DVDAICTCKILQGLFKSDNISYTLVPVGGISELKTAY-XXXXXXXXXXXXXXCGGTIDLV 387
           D DA+C  K+L  +  +D+I +++ PV   +   +                  G   DL 
Sbjct: 37  DADALCALKVLTHVLSADSIRFSIYPVASAAAAASLLASFSASHPLCLLLINWGAHRDLR 96

Query: 388 DILQPEEDVVFFVLDSHKPTDVCNV-YSDGQVTLVYRDEXEN 510
            +L P      FV+DSH+P  + N+  ++ +V +++  + E+
Sbjct: 97  AVLPPA--ATAFVVDSHRPIHLHNLSAANDRVVVLFTTDDEH 136


>08_01_0033 + 244930-245105,245297-245344,245835-246539,246652-246796,
            246893-247240,247882-248721,248786-248832,249470-249596,
            249672-249836,249973-251370,251453-251713,251802-252161
          Length = 1539

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 12/47 (25%), Positives = 26/47 (55%)
 Frame = -1

Query: 468  AINIADISRFMGVQHKKYHILFGL*DIDQVYSTSAVHQHYVLDFFIV 328
            ++N+ D S  +GV  +K+ ++FG+ D  + Y+     + +V    +V
Sbjct: 1421 SVNVMDYSLLVGVDKEKHELVFGIIDYLRQYTWDKQLETWVKSSLVV 1467


>03_03_0209 -
           15461255-15461542,15461666-15461764,15461868-15461972,
           15462076-15462168,15462276-15462368,15462453-15462506,
           15463759-15463833,15464810-15464929
          Length = 308

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 13/45 (28%), Positives = 24/45 (53%)
 Frame = +1

Query: 397 QPEEDVVFFVLDSHKPTDVCNVYSDGQVTLVYRDEXENIPNFDDI 531
           Q  E+V+  + ++ KP D   +   GQV  +   + ++I + DDI
Sbjct: 252 QSLEEVMAIIQEARKPGDAMKLAGAGQVACLGSMDLDDIDDIDDI 296


>12_01_0818 + 7524549-7524747,7524855-7525863,7525964-7526108,
            7526206-7526295,7526404-7526553,7527333-7528094,
            7528177-7528496,7528581-7528707,7528792-7528959,
            7529054-7530466,7530563-7530823,7530983-7531144,
            7531976-7532121,7532601-7532667,7533483-7533587
          Length = 1707

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 14/50 (28%), Positives = 26/50 (52%)
 Frame = -1

Query: 522  KIRNVLXFITVHQCHLSIAINIADISRFMGVQHKKYHILFGL*DIDQVYS 373
            K +N+L     +       +N+ D S F+GV  +K  ++FG+ D  + Y+
Sbjct: 1531 KTKNLLERAIWNDTAFLSRMNVMDYSLFVGVDKQKKELVFGIIDYLRQYT 1580


>11_01_0638 + 5106962-5107553,5108107-5108303,5108955-5110196
          Length = 676

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 18/51 (35%), Positives = 23/51 (45%)
 Frame = -1

Query: 483 CHLSIAINIADISRFMGVQHKKYHILFGL*DIDQVYSTSAVHQHYVLDFFI 331
           CH S   N+  I R  GV   K+ ILF L    Q   +  +H    L +FI
Sbjct: 571 CHSSCR-NV--IERSFGVLKNKWRILFSLPSYSQEKQSRIIHACIALHYFI 618


>04_04_1696 + 35448667-35449641,35449726-35450562,35450667-35451001,
            35451371-35451497,35451594-35451752,35451872-35453053,
            35453164-35453424,35453513-35453761
          Length = 1374

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = -1

Query: 468  AINIADISRFMGVQHKKYHILFGL*DIDQVYS 373
            +IN+ D S  +GV  +K+  +FG+ D  + Y+
Sbjct: 1293 SINVMDYSLLVGVDKEKHEFVFGIIDYLRQYT 1324


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,214,764
Number of Sequences: 37544
Number of extensions: 232947
Number of successful extensions: 429
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 427
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 429
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1190246000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)