Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_L15
(844 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032626-1|CAA21538.1| 183|Caenorhabditis elegans Hypothetical ... 200 1e-51
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 32 0.59
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated... 32 0.59
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 32 0.59
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 32 0.59
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 32 0.59
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 32 0.59
Z30423-1|CAA83003.1| 1681|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z83113-2|CAB05544.1| 479|Caenorhabditis elegans Hypothetical pr... 29 4.1
AL023828-3|CAA19468.1| 572|Caenorhabditis elegans Hypothetical ... 29 4.1
AL023828-2|CAA19449.1| 570|Caenorhabditis elegans Hypothetical ... 29 4.1
AL021475-1|CAA16312.1| 758|Caenorhabditis elegans Hypothetical ... 28 7.2
Z78200-5|CAB01584.2| 512|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z77661-2|CAB01184.4| 265|Caenorhabditis elegans Hypothetical pr... 28 9.5
AL023828-4|CAA19469.1| 462|Caenorhabditis elegans Hypothetical ... 28 9.5
AC199172-5|ABO33273.1| 305|Caenorhabditis elegans F-box a prote... 28 9.5
AC087081-5|AAK66038.1| 273|Caenorhabditis elegans Hypothetical ... 28 9.5
>AL032626-1|CAA21538.1| 183|Caenorhabditis elegans Hypothetical
protein Y37D8A.1 protein.
Length = 183
Score = 200 bits (488), Expect = 1e-51
Identities = 95/182 (52%), Positives = 126/182 (69%), Gaps = 5/182 (2%)
Frame = +2
Query: 227 MPAYHSTLTDYSQTVG----NLAILPLRTSFRGPAPTSSDIELDIIDEALNYFKANVFFR 394
MPAYHS + + N+ LP+RT+F+GPAP ++ + DIIDEAL YFK N+FFR
Sbjct: 1 MPAYHSKFDTELKVLPLGNTNMGKLPIRTNFKGPAPQTN--QDDIIDEALTYFKPNIFFR 58
Query: 395 FYEIKSDADRVLIYLTLYVSECLKRLQKCSSKNQGQQEMYMLAISKF-DIPGEPGFPLNS 571
+EIK ADR +IYL Y++ECL++LQK +K GQ++++ LA+S IPGE GFPLNS
Sbjct: 59 EFEIKGPADRTMIYLIFYITECLRKLQKSPNKIAGQKDLHALALSHLLPIPGENGFPLNS 118
Query: 572 VYARPTSQQESDLMRQYLQQLRHETGTRVCEKVFATEDGKPSKWWLCFSRRKFMDKSLSG 751
+Y P S+ + D MR YLQQ+R E G R+C+ F +PSKWWLCF+RR+FMDK L G
Sbjct: 119 MYKAPQSKPDEDEMRAYLQQIRQEIGARLCDLAFPDPQDRPSKWWLCFARRRFMDKGLVG 178
Query: 752 PG 757
G
Sbjct: 179 QG 180
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 31.9 bits (69), Expect = 0.59
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2
Query: 617 QYLQQLRHETGTRVCEKVFATEDGKPSKWW 706
++L +R TGT+V KV T D KPS W
Sbjct: 2758 EWLSNVRARTGTKVVHKVVFTGDPKPSLTW 2787
>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
protein 89, isoform e protein.
Length = 5992
Score = 31.9 bits (69), Expect = 0.59
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2
Query: 617 QYLQQLRHETGTRVCEKVFATEDGKPSKWW 706
++L +R TGT+V KV T D KPS W
Sbjct: 2118 EWLSNVRARTGTKVVHKVVFTGDPKPSLTW 2147
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 31.9 bits (69), Expect = 0.59
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2
Query: 617 QYLQQLRHETGTRVCEKVFATEDGKPSKWW 706
++L +R TGT+V KV T D KPS W
Sbjct: 2758 EWLSNVRARTGTKVVHKVVFTGDPKPSLTW 2787
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 31.9 bits (69), Expect = 0.59
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2
Query: 617 QYLQQLRHETGTRVCEKVFATEDGKPSKWW 706
++L +R TGT+V KV T D KPS W
Sbjct: 2758 EWLSNVRARTGTKVVHKVVFTGDPKPSLTW 2787
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 31.9 bits (69), Expect = 0.59
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2
Query: 617 QYLQQLRHETGTRVCEKVFATEDGKPSKWW 706
++L +R TGT+V KV T D KPS W
Sbjct: 2118 EWLSNVRARTGTKVVHKVVFTGDPKPSLTW 2147
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 31.9 bits (69), Expect = 0.59
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2
Query: 617 QYLQQLRHETGTRVCEKVFATEDGKPSKWW 706
++L +R TGT+V KV T D KPS W
Sbjct: 2758 EWLSNVRARTGTKVVHKVVFTGDPKPSLTW 2787
>Z30423-1|CAA83003.1| 1681|Caenorhabditis elegans Hypothetical protein
T20G5.1 protein.
Length = 1681
Score = 29.9 bits (64), Expect = 2.4
Identities = 26/101 (25%), Positives = 45/101 (44%), Gaps = 8/101 (7%)
Frame = +2
Query: 368 YFKANVFFRFYEIKSDADRVLIYLTLYVSECLKRLQKCS--------SKNQGQQEMYMLA 523
Y +A F+ +++ S A VLI + + +KC+ +K Q QQ + A
Sbjct: 1067 YEEAFAIFKKFDVNSSAINVLIENVNNLDRAYEFAEKCNQSDVWASLAKAQLQQNLVKEA 1126
Query: 524 ISKFDIPGEPGFPLNSVYARPTSQQESDLMRQYLQQLRHET 646
+ F +PG + V ++ DL+R YLQ R ++
Sbjct: 1127 VDSFIKADDPGAYMEVVNKCSQTEHWEDLVR-YLQMARKKS 1166
>Z83113-2|CAB05544.1| 479|Caenorhabditis elegans Hypothetical
protein K08H10.4 protein.
Length = 479
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 241 FNVN*LQSNSWESCNLTTSNFVQRPRPNELR 333
+N+N S+S+ESC TT NFV+ LR
Sbjct: 297 WNINGSSSHSFESCYGTTKNFVESSEIMHLR 327
>AL023828-3|CAA19468.1| 572|Caenorhabditis elegans Hypothetical
protein Y17G7B.2b protein.
Length = 572
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = +2
Query: 236 YHSTLTDYSQTVGNLAILPLRTSFRGPAPTSSDIELDIIDEALNY--FKANVFFRFYEIK 409
YH +G L LP+ + PA S+ L + + N FKAN FF E
Sbjct: 396 YHFGGFKQGDVLGCLIHLPVDKKLQIPANLPSEKYLPVSHKGFNLISFKANYFFEVQEES 455
Query: 410 SDADRVLI 433
+D + L+
Sbjct: 456 ADIAKTLV 463
>AL023828-2|CAA19449.1| 570|Caenorhabditis elegans Hypothetical
protein Y17G7B.2a protein.
Length = 570
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = +2
Query: 236 YHSTLTDYSQTVGNLAILPLRTSFRGPAPTSSDIELDIIDEALNY--FKANVFFRFYEIK 409
YH +G L LP+ + PA S+ L + + N FKAN FF E
Sbjct: 394 YHFGGFKQGDVLGCLIHLPVDKKLQIPANLPSEKYLPVSHKGFNLISFKANYFFEVQEES 453
Query: 410 SDADRVLI 433
+D + L+
Sbjct: 454 ADIAKTLV 461
>AL021475-1|CAA16312.1| 758|Caenorhabditis elegans Hypothetical
protein Y32F6B.1 protein.
Length = 758
Score = 28.3 bits (60), Expect = 7.2
Identities = 9/37 (24%), Positives = 21/37 (56%)
Frame = +2
Query: 560 PLNSVYARPTSQQESDLMRQYLQQLRHETGTRVCEKV 670
P N V ++SDL+++Y++ + G+ +C+ +
Sbjct: 140 PKNQVVMNYEGDEKSDLLQKYVEYCHYHKGSEICKNL 176
>Z78200-5|CAB01584.2| 512|Caenorhabditis elegans Hypothetical
protein T04H1.7 protein.
Length = 512
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/52 (25%), Positives = 27/52 (51%)
Frame = +2
Query: 284 ILPLRTSFRGPAPTSSDIELDIIDEALNYFKANVFFRFYEIKSDADRVLIYL 439
+L L ++ + TS ++ LD ++ + + F FY +D++L+YL
Sbjct: 440 LLKLSSNLKNAKQTSENLFLDTVESTYTDNLSPLNFEFYPKLYSSDQILLYL 491
>Z77661-2|CAB01184.4| 265|Caenorhabditis elegans Hypothetical
protein F40G12.2 protein.
Length = 265
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/54 (24%), Positives = 27/54 (50%)
Frame = +2
Query: 353 DEALNYFKANVFFRFYEIKSDADRVLIYLTLYVSECLKRLQKCSSKNQGQQEMY 514
++ LN+ ANV + + DA+ ++ + +CL+ +KC K + + Y
Sbjct: 54 EDPLNHQNANVNMSPWGLPYDAECGMVPMVFLEMDCLEPAKKCRQKIENFENKY 107
>AL023828-4|CAA19469.1| 462|Caenorhabditis elegans Hypothetical
protein Y17G7B.2c protein.
Length = 462
Score = 27.9 bits (59), Expect = 9.5
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +2
Query: 269 VGNLAILPLRTSFRGPAPTSSDIELDIIDEALNY--FKANVFFRFYEIKSDADRVLI 433
+G L LP+ + PA S+ L + + N FKAN FF E +D + L+
Sbjct: 297 LGCLIHLPVDKKLQIPANLPSEKYLPVSHKGFNLISFKANYFFEVQEESADIAKTLV 353
>AC199172-5|ABO33273.1| 305|Caenorhabditis elegans F-box a protein
protein 30 protein.
Length = 305
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -2
Query: 699 LLGFPSSVANTFSHTLVPVSCLNCCKYC 616
LL P S+AN L PV L C K C
Sbjct: 8 LLNLPISIANQVLEKLGPVEILTCRKVC 35
>AC087081-5|AAK66038.1| 273|Caenorhabditis elegans Hypothetical
protein Y82E9BL.15 protein.
Length = 273
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = -2
Query: 699 LLGFPSSVANTFSHTLVPVSCLNCCKYCLIKSDSC*LVGLAYTEL 565
LL P ++AN L P++ L C K C + +G+ Y ++
Sbjct: 46 LLELPITIANQILEKLEPMAMLTCRKVCRTLRSTIDRLGILYGDI 90
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,858,022
Number of Sequences: 27780
Number of extensions: 335097
Number of successful extensions: 921
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 919
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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