Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_L12
(771 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 177 1e-44
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 170 9e-43
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 169 2e-42
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 105 3e-23
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 101 5e-22
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 89 5e-18
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 76 4e-14
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 58 1e-08
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 32 0.45
SB_23902| Best HMM Match : Pkinase (HMM E-Value=2.29813e-43) 31 1.4
SB_18605| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_56402| Best HMM Match : Extensin_2 (HMM E-Value=1.1) 29 4.2
SB_49454| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_39579| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_4326| Best HMM Match : V-set (HMM E-Value=0.036) 29 4.2
SB_42496| Best HMM Match : rve (HMM E-Value=0.02) 29 5.5
SB_42589| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_11382| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_7587| Best HMM Match : zf-C2H2 (HMM E-Value=3.5e-13) 28 7.3
SB_39723| Best HMM Match : Homeobox (HMM E-Value=5.4e-32) 28 9.6
SB_17486| Best HMM Match : CheR (HMM E-Value=3.2) 28 9.6
SB_16839| Best HMM Match : zf-GRF (HMM E-Value=3.7e-15) 28 9.6
SB_14162| Best HMM Match : TonB_dep_Rec (HMM E-Value=3.7) 28 9.6
SB_35605| Best HMM Match : Treacle (HMM E-Value=0.54) 28 9.6
SB_29300| Best HMM Match : GFO_IDH_MocA (HMM E-Value=2.1e-17) 28 9.6
SB_23516| Best HMM Match : Glyco_tran_28_C (HMM E-Value=0.004) 28 9.6
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 177 bits (430), Expect = 1e-44
Identities = 91/168 (54%), Positives = 115/168 (68%), Gaps = 2/168 (1%)
Frame = +3
Query: 273 GAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTN 452
G VIGIDLGTT SCV V + +++ N +G+R TPS+VAF++EGERL+G AK Q TN
Sbjct: 701 GTVIGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTN 760
Query: 453 SGNTFYATKRLIGRRFDDPEVQKDMKNLSYKVV-RASNGDAWVQGTDG-KVYSPSQIGAF 626
NT + KRLIGR +DD VQ D+K +KVV + V+ D K ++ +I A
Sbjct: 761 PENTVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEISAM 820
Query: 627 VLIKMKETAEAYLNTSVKNAVITVPAYFNDSXRQATKDAGQISGLNVL 770
VL KMKETAEAYL V +AV+TVPAYFND+ RQATKDAG I+GL V+
Sbjct: 821 VLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGAIAGLTVM 868
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 170 bits (414), Expect = 9e-43
Identities = 90/169 (53%), Positives = 112/169 (66%), Gaps = 2/169 (1%)
Frame = +3
Query: 270 RGAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVT 449
+ IGIDLGTT SCV V + +++ N +G+RTTPS+V F+ + ERLVG AK Q
Sbjct: 3 KAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFT-DTERLVGDAAKNQVAL 61
Query: 450 NSGNTFYATKRLIGRRFDDPEVQKDMKNLSYKVVRASNGDAWVQGTDG--KVYSPSQIGA 623
N NT + KRLIGRR+DD VQ DMK +K++ +N G K ++ +I +
Sbjct: 62 NPENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEISS 121
Query: 624 FVLIKMKETAEAYLNTSVKNAVITVPAYFNDSXRQATKDAGQISGLNVL 770
VL KMKETAEAYL V +AVITVPAYFNDS RQATKDAG I+GLNVL
Sbjct: 122 MVLGKMKETAEAYLGQKVTSAVITVPAYFNDSQRQATKDAGTIAGLNVL 170
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 169 bits (412), Expect = 2e-42
Identities = 88/165 (53%), Positives = 111/165 (67%), Gaps = 2/165 (1%)
Frame = +3
Query: 282 IGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSGN 461
+GIDLGTT SCV V + +++ N +G+RTTPS+VAFS + ERL+G AK Q N N
Sbjct: 7 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFS-DTERLIGDAAKNQVAMNPEN 65
Query: 462 TFYATKRLIGRRFDDPEVQKDMKNLSYKVVRASNGDAWVQGTDG--KVYSPSQIGAFVLI 635
T + KRLIGR+FDDP V +DM + + V+R G K + P +I + VL
Sbjct: 66 TVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEISSMVLT 125
Query: 636 KMKETAEAYLNTSVKNAVITVPAYFNDSXRQATKDAGQISGLNVL 770
KMKETAEAYL V +AV+TVPAYF+DS RQATKDAG I+GLNVL
Sbjct: 126 KMKETAEAYLGAKVTDAVVTVPAYFHDSQRQATKDAGTIAGLNVL 170
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 105 bits (253), Expect = 3e-23
Identities = 73/187 (39%), Positives = 99/187 (52%), Gaps = 27/187 (14%)
Frame = +3
Query: 270 RGAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVT 449
+ IGIDLGTT SCV V + +++ N +G+RTTPS+VAF+ E ERLVG AK Q
Sbjct: 3 KAPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDE-ERLVGDAAKNQVAM 61
Query: 450 NSGNTFYATKRLIGRRFDDPEVQKDMKNLSYKVV-RASNGDAWVQ--GTDGKVYSPSQIG 620
N NT + KRLIGRRFDDP V+ DMK+ S++VV A V+ G ++ +
Sbjct: 62 NPTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETKTFFAEEVVN 121
Query: 621 AF----VLIKMKETAEAYLNTSVKNAVI-----TVPAY---------------FNDSXRQ 728
V ++ K + + + + V+ T AY FNDS RQ
Sbjct: 122 EAGRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQ 181
Query: 729 ATKDAGQ 749
ATKDAG+
Sbjct: 182 ATKDAGE 188
Score = 83.0 bits (196), Expect = 2e-16
Identities = 41/53 (77%), Positives = 44/53 (83%)
Frame = +3
Query: 612 QIGAFVLIKMKETAEAYLNTSVKNAVITVPAYFNDSXRQATKDAGQISGLNVL 770
QI + VL KMKETAEAYL V +AV+TVPAYFNDS RQATKDAG ISGLNVL
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAGVISGLNVL 263
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 101 bits (243), Expect = 5e-22
Identities = 63/169 (37%), Positives = 93/169 (55%), Gaps = 5/169 (2%)
Frame = +3
Query: 279 VIGIDLGTTNSCVAVMEGKTPKV--VENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTN 452
+IGIDLGTT SCV + + ++ + + PS VAF+ +G LVG A QA N
Sbjct: 33 IIGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGV-LVGEKALSQAEIN 91
Query: 453 SGNTFYATKRLIGRRFDDPEVQKDMKNLSYKVVRASNGDA-WVQGTDGK--VYSPSQIGA 623
NT Y KR IG+ F E+ + K ++V G+A ++ G G V +P +IG
Sbjct: 92 PKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGNAGFLVGKKGNFTVITPEEIGG 151
Query: 624 FVLIKMKETAEAYLNTSVKNAVITVPAYFNDSXRQATKDAGQISGLNVL 770
+V+ K++ AE L T+V AV++VPA F+ R AT A ++G+ VL
Sbjct: 152 YVIKKLRTMAERNLTTTVTKAVMSVPAEFDIKQRNATVKAASLAGITVL 200
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 88.6 bits (210), Expect = 5e-18
Identities = 48/112 (42%), Positives = 66/112 (58%), Gaps = 3/112 (2%)
Frame = +3
Query: 444 VTNSGNTFYATKRLIGRRFDDPEVQKDMKNLSYKVVRASNGDAWVQGTD-GK--VYSPSQ 614
++N NT KR IGR+F DP VQK++ +L YKVV N +Q GK V+SP Q
Sbjct: 116 ISNLKNTISQFKRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQ 175
Query: 615 IGAFVLIKMKETAEAYLNTSVKNAVITVPAYFNDSXRQATKDAGQISGLNVL 770
+ A + ++K TAE L T V + VI+VP+Y+ D R+ DA +GLN L
Sbjct: 176 VMAMLFTRLKTTAEIALKTKVTDCVISVPSYYTDRQRRCMLDASATAGLNCL 227
Score = 36.7 bits (81), Expect = 0.021
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +3
Query: 276 AVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQ 440
+V+G D+G + +AV G + V N R TPS V+ + +RL+G K Q
Sbjct: 2 SVVGFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSLG-DKQRLIGTSGKNQ 55
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 75.8 bits (178), Expect = 4e-14
Identities = 36/57 (63%), Positives = 46/57 (80%)
Frame = +3
Query: 600 YSPSQIGAFVLIKMKETAEAYLNTSVKNAVITVPAYFNDSXRQATKDAGQISGLNVL 770
++P QI A VL ++K AEA+L +VK AVITVPA+FND+ RQATKDAG I+GL+VL
Sbjct: 13 FAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAHFNDAQRQATKDAGTIAGLDVL 69
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 57.6 bits (133), Expect = 1e-08
Identities = 28/45 (62%), Positives = 33/45 (73%)
Frame = +3
Query: 324 MEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSG 458
M+GKTPKV+EN+EGSRTTPS VAF+ EGERL + V SG
Sbjct: 1 MDGKTPKVIENAEGSRTTPSVVAFTPEGERLTDINLPYITVDASG 45
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 42.7 bits (96), Expect = 3e-04
Identities = 18/57 (31%), Positives = 34/57 (59%)
Frame = +3
Query: 600 YSPSQIGAFVLIKMKETAEAYLNTSVKNAVITVPAYFNDSXRQATKDAGQISGLNVL 770
++P ++ +L + E + + +K+ V+TVP +FN + R+A A ++ GLNVL
Sbjct: 80 FTPEELMGMILNHSRFIGEQFADHPIKDVVLTVPPFFNQAERRALLRAAELVGLNVL 136
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 32.3 bits (70), Expect = 0.45
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Frame = +3
Query: 249 RNKSEGVRGAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLV--- 419
RN R A++ GT + V++G T ++ N G R TP+ VAFS + E+L+
Sbjct: 56 RNPICKAREAILIARAGTFRTRWPVLDGNTT-IIANDAGDRVTPAMVAFS-DTEKLIDKD 113
Query: 420 GMPAKRQAVTNSGNTFYATKRLI 488
G+P + +N N + K +I
Sbjct: 114 GLP-YYEVESNERNIQVSPKEVI 135
>SB_23902| Best HMM Match : Pkinase (HMM E-Value=2.29813e-43)
Length = 1602
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +1
Query: 241 YNLETSLRVFVEPSLESIWARQTRALPSWRARHPRWWKTVKALGRL 378
Y L ++ V+PS+E +W + L +R HP +W + + RL
Sbjct: 433 YQLPYFDKICVDPSIEEVW--KVVCLEKYRPSHPNYWLQDQYIERL 476
>SB_18605| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1400
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 5/40 (12%)
Frame = +1
Query: 268 FVEPSLESIWARQTRAL-----PSWRARHPRWWKTVKALG 372
++ P ++S+ AR+ RAL P + R +WWK + +LG
Sbjct: 937 WITPRIKSLVARRQRALSRYVKPLKQTRVDKWWKNINSLG 976
>SB_56402| Best HMM Match : Extensin_2 (HMM E-Value=1.1)
Length = 352
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -3
Query: 421 PTRRSPSFEKATWEGVVREPSLFSTTLGVLPSMTATH 311
PT +PS E W V P+L++ T G L T T+
Sbjct: 164 PTYGTPSMEPHVWNPNVWNPNLWNLTYGTLSIETPTY 200
>SB_49454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 696
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +3
Query: 93 IKMLNATRAFGRKALECTGLSSDLYTQRNFSSILKSNATPTVPIYQR 233
+ A + GR EC+G+ LYT+ F + A TVP QR
Sbjct: 378 VSKAQARQRLGRAGRECSGVCYRLYTEEQFEQL----AEATVPEIQR 420
>SB_39579| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 490
Score = 29.1 bits (62), Expect = 4.2
Identities = 27/109 (24%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Frame = +3
Query: 138 ECTGLSSDLYTQRNFSSILKSNATPTVPIYQRHGVQFRNKSEGVR--GAVIGIDLGTTNS 311
E G D + + +++ +PT +Y+ V R SE ++ GA+ D G + +
Sbjct: 132 ENLGAQPDAHIDMHAIDLVRKYGSPT-NVYRIADVVGRPLSEVLQLTGAIQLTDWGFSEA 190
Query: 312 CVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSG 458
C G+ + +E +EG TTP G+ + M A R+ + + G
Sbjct: 191 CHPYTSGRVGQHLEQNEGWITTPELKDLLDSGDLV--MAAVREVLYSVG 237
>SB_4326| Best HMM Match : V-set (HMM E-Value=0.036)
Length = 156
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Frame = -3
Query: 406 PSFEKATWEGVVREPSLFSTT---LGVLPSMTATHEFVVPR 293
P+ K TW+ VRE +TT G PS A H F P+
Sbjct: 95 PAITKKTWQLSVRETGAVNTTYFPAGERPSKIADHSFSSPK 135
>SB_42496| Best HMM Match : rve (HMM E-Value=0.02)
Length = 371
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +1
Query: 277 PSLESIWARQTRALPSWRARHPR-WWKTVKALGRLPPMWPSRKR 405
P ++++ TR + S WWK K L P WPS+ R
Sbjct: 51 PGVDNLADLLTRGMSSSSLTESELWWKGPKLLSASPASWPSQTR 94
>SB_42589| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 183
Score = 28.3 bits (60), Expect = 7.3
Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
Frame = -1
Query: 432 WRAFRPDARPLSRR---PHGRESSESLHCFPPPWVSCPP 325
W A PD S R P G+ SE+L PP SC P
Sbjct: 27 WTAPDPDIPVYSARARSPRGQRQSENLRTIPPVSNSCSP 65
>SB_11382| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 143
Score = 28.3 bits (60), Expect = 7.3
Identities = 29/81 (35%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Frame = +1
Query: 220 LFTSDMAYNLETSLRVFVEPSLESIWARQTRALPSWRARHPRWWKT--VKALGRL---PP 384
LF +DM NLE +LR+F +P LES + AL R R W+ V L RL PP
Sbjct: 31 LFINDMQENLECTLRLFGDP-LESTCRHASLALAVVLQR--RDWENPGVTQLNRLAAHPP 87
Query: 385 MWPSRKRASVWSECPPNGKRS 447
R ++ P RS
Sbjct: 88 FASWRNSEEARTDRPSQQLRS 108
>SB_7587| Best HMM Match : zf-C2H2 (HMM E-Value=3.5e-13)
Length = 351
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +3
Query: 483 LIGRRFDDPEVQKDMKNLSYKVVRASNGDAWVQGT 587
L G++F +P+V +D+ KV RASN + + G+
Sbjct: 307 LCGKKFKEPKVFQDIFASPTKVKRASNATSVISGS 341
>SB_39723| Best HMM Match : Homeobox (HMM E-Value=5.4e-32)
Length = 257
Score = 27.9 bits (59), Expect = 9.6
Identities = 17/55 (30%), Positives = 22/55 (40%), Gaps = 8/55 (14%)
Frame = -1
Query: 390 PHGRESSESL---HCFPPPWVSC-----PP*RQRTSLSCPDRFQ*RLHEHPQTCF 250
PH S E H +P PW+ C PP + LS + H P+T F
Sbjct: 59 PHSMSSCEHCDEHHVYPSPWIQCGQHFMPPGCSQHYLSARNMIVSGRHRRPRTAF 113
>SB_17486| Best HMM Match : CheR (HMM E-Value=3.2)
Length = 1177
Score = 27.9 bits (59), Expect = 9.6
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Frame = +3
Query: 222 IYQRHGVQFRNKSEGVR--GAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAF 395
+Y+ V R SE ++ GA+ + G + +C G+ + +E +EGS TTP
Sbjct: 547 VYRIADVAGRPLSEVLQLTGAIQLTEWGFSEACHPYTSGRVGQHLEQNEGSITTPELKDL 606
Query: 396 SKEGERLVGMPAKRQAVTNSG 458
G+ + M A R+ + + G
Sbjct: 607 LDSGD--LAMAAAREVLFSVG 625
>SB_16839| Best HMM Match : zf-GRF (HMM E-Value=3.7e-15)
Length = 333
Score = 27.9 bits (59), Expect = 9.6
Identities = 17/54 (31%), Positives = 23/54 (42%)
Frame = +3
Query: 312 CVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSGNTFYA 473
CV +TP +V + G TTP + +RL M + N G FYA
Sbjct: 219 CVTPGASRTPTLVPSINGGNTTPPLCDCGRRAKRLTVM----KPGPNQGRVFYA 268
>SB_14162| Best HMM Match : TonB_dep_Rec (HMM E-Value=3.7)
Length = 412
Score = 27.9 bits (59), Expect = 9.6
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = -3
Query: 442 ACRLAGIP-TRRSPSFEKATWEGVVREPSLFSTTLGVLPSMTATHEFVVPRSIPMTAPRT 266
+ L+ IP R S + ATW + TLG+L +T HE + M A +
Sbjct: 219 SAELSFIPYVRHSTNDYIATWNSYTPKAESSVDTLGLLSKLTLQHENGSETVVGMDAEYS 278
Query: 265 PSDLF 251
SD F
Sbjct: 279 QSDSF 283
>SB_35605| Best HMM Match : Treacle (HMM E-Value=0.54)
Length = 776
Score = 27.9 bits (59), Expect = 9.6
Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 3/110 (2%)
Frame = +3
Query: 117 AFGRKALECTGLSSDLYTQRNFSSILKSNATPTVPIYQRHGVQFRNKSEGVRGAVIGIDL 296
A RKA EC GL S +R SS S++ + Q R + ++ G++
Sbjct: 263 AMPRKAQECDGLESLDQLERQPSS--PSHSRSSGGRQHACRTQTRQATGRLQSRASGMEA 320
Query: 297 GTTNSCVAVMEGKTPKVVENSEGSRTT---PSHVAFSKEGERLVGMPAKR 437
T +S + ME T +S +R+T P+ A +E + A+R
Sbjct: 321 NTHSSRTSGMEANTHSSAPSSPRNRSTRPRPATAASQRERSPSLSPDARR 370
>SB_29300| Best HMM Match : GFO_IDH_MocA (HMM E-Value=2.1e-17)
Length = 634
Score = 27.9 bits (59), Expect = 9.6
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +1
Query: 334 RHPRWWKTVKALGRLPPMWPSRKRAS 411
+ P +++ ALG +PP+WP+ RAS
Sbjct: 557 KSPAAIQSLIALGAVPPVWPNGHRAS 582
>SB_23516| Best HMM Match : Glyco_tran_28_C (HMM E-Value=0.004)
Length = 969
Score = 27.9 bits (59), Expect = 9.6
Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Frame = -2
Query: 473 RVKRVTAIRDRLPFGGHSDQTLALFREGHMGGSRPRAFTV----FHHLGCLALHDGNA 312
RV RV R R P +D + GHMG RP F++ + L LAL G A
Sbjct: 209 RVSRVMRKRPRAPVVEAADLVEYVQALGHMGHLRPHGFSLPFYQLYMLDVLALRKGAA 266
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,075,027
Number of Sequences: 59808
Number of extensions: 589137
Number of successful extensions: 1801
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1633
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1791
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2095976575
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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