Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_L11
         (789 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U55854-11|AAT81209.1|  570|Caenorhabditis elegans Map kinase pro...    29   2.9  
U55854-10|AAN60533.1|  426|Caenorhabditis elegans Map kinase pro...    29   2.9  
U55854-9|AAA98016.3|  605|Caenorhabditis elegans Map kinase prot...    29   2.9  
AF067937-4|AAF99911.2|  352|Caenorhabditis elegans Hypothetical ...    29   2.9  
Z49887-1|CAA90058.1|  710|Caenorhabditis elegans Hypothetical pr...    29   5.0  
U40952-1|AAK68681.3|  436|Caenorhabditis elegans Hypothetical pr...    28   6.6  
AF000261-2|AAB52925.1|  313|Caenorhabditis elegans Hypothetical ...    28   8.8  

>U55854-11|AAT81209.1|  570|Caenorhabditis elegans Map kinase
           protein 2, isoform c protein.
          Length = 570

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 19/70 (27%), Positives = 28/70 (40%)
 Frame = +2

Query: 272 MNNARYVRELDFARFHFYDRTGIYTNIKAVDGHALQGASSIRYRRTIPIFSPYKVETKLV 451
           +N    +R  DF     Y       +   V GH  Q  S+  YR    +FS  + +TK+ 
Sbjct: 155 LNGDCLLRIADFGMARAYASASTVRDDANVGGHMTQYVSTRWYRAPEILFSMVEYDTKVD 214

Query: 452 YWEDKTLFIE 481
            W    +F E
Sbjct: 215 LWSAGCIFAE 224


>U55854-10|AAN60533.1|  426|Caenorhabditis elegans Map kinase
           protein 2, isoform b protein.
          Length = 426

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 19/70 (27%), Positives = 28/70 (40%)
 Frame = +2

Query: 272 MNNARYVRELDFARFHFYDRTGIYTNIKAVDGHALQGASSIRYRRTIPIFSPYKVETKLV 451
           +N    +R  DF     Y       +   V GH  Q  S+  YR    +FS  + +TK+ 
Sbjct: 190 LNGDCLLRIADFGMARAYASASTVRDDANVGGHMTQYVSTRWYRAPEILFSMVEYDTKVD 249

Query: 452 YWEDKTLFIE 481
            W    +F E
Sbjct: 250 LWSAGCIFAE 259


>U55854-9|AAA98016.3|  605|Caenorhabditis elegans Map kinase protein
           2, isoform a protein.
          Length = 605

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 19/70 (27%), Positives = 28/70 (40%)
 Frame = +2

Query: 272 MNNARYVRELDFARFHFYDRTGIYTNIKAVDGHALQGASSIRYRRTIPIFSPYKVETKLV 451
           +N    +R  DF     Y       +   V GH  Q  S+  YR    +FS  + +TK+ 
Sbjct: 190 LNGDCLLRIADFGMARAYASASTVRDDANVGGHMTQYVSTRWYRAPEILFSMVEYDTKVD 249

Query: 452 YWEDKTLFIE 481
            W    +F E
Sbjct: 250 LWSAGCIFAE 259


>AF067937-4|AAF99911.2|  352|Caenorhabditis elegans Hypothetical
           protein F22F7.6 protein.
          Length = 352

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
 Frame = +2

Query: 155 RIAFTIGI-GRLFQKKCGINDSTTIYGFCTTQDVDIFLRHMNNARYVRELD 304
           R  +T  +   +F    GI  + TIY   T    + +   +  ARYVRE+D
Sbjct: 286 RAGYTFHVPSHVFDVHEGIKHTNTIYSKATIAHQEAYAMDIAGARYVREMD 336


>Z49887-1|CAA90058.1|  710|Caenorhabditis elegans Hypothetical
           protein F09B9.1 protein.
          Length = 710

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
 Frame = +2

Query: 521 IVLSRQNLLNVDAAALFKGIPGADQKPECPEEIKHWLQSIE----VSSAKLRKK 670
           ++LS    + +D   +FK  P     P+C  + + W++S+E    VS A L+K+
Sbjct: 10  LLLSTSGAVTLDWKDIFKPKPLHGLSPQCLNDTQTWIKSLELFAGVSEACLKKQ 63


>U40952-1|AAK68681.3|  436|Caenorhabditis elegans Hypothetical
           protein C03B1.13 protein.
          Length = 436

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +1

Query: 1   ECVFVVSLSRTFYNSIHRFNCFKGLISEYNVL 96
           EC+     S+ FY+   R N ++ LIS Y ++
Sbjct: 157 ECIHEAIHSKLFYHGTERSNSYRPLISNYEMM 188


>AF000261-2|AAB52925.1|  313|Caenorhabditis elegans Hypothetical
           protein F19B10.5 protein.
          Length = 313

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +3

Query: 528 CHDKTSLMWTQLHYSRVFQELIRNLNVQKKLSIGFNL 638
           CH K S +W QL+YS   +        Q+  ++GF++
Sbjct: 148 CH-KLSALWFQLYYSHKAERTAERTEPQQTENLGFSI 183


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,430,228
Number of Sequences: 27780
Number of extensions: 406393
Number of successful extensions: 1096
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1063
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1096
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)