Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_L08
(749 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8676| Best HMM Match : Peptidase_M18 (HMM E-Value=0) 119 3e-27
SB_28963| Best HMM Match : AAR2 (HMM E-Value=0) 36 0.046
SB_13244| Best HMM Match : HGTP_anticodon (HMM E-Value=1e-21) 35 0.061
SB_16018| Best HMM Match : Antimicrobial18 (HMM E-Value=0.89) 31 0.76
SB_38972| Best HMM Match : PIP5K (HMM E-Value=0) 30 1.7
SB_33703| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_31352| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_48621| Best HMM Match : SFT2 (HMM E-Value=6.6) 28 7.0
SB_40007| Best HMM Match : Arm (HMM E-Value=0.84) 28 7.0
SB_36891| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_47847| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_36215| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_20539| Best HMM Match : VWA (HMM E-Value=5.1848e-44) 28 9.3
SB_7678| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
>SB_8676| Best HMM Match : Peptidase_M18 (HMM E-Value=0)
Length = 1161
Score = 119 bits (286), Expect = 3e-27
Identities = 49/112 (43%), Positives = 73/112 (65%)
Frame = +3
Query: 27 QAVVVPCGITASSSADERQALMDSCKALVNDLLAAGVRAEGDYRDNYSPGWKFNHWELKG 206
+ V++PCGIT + E+ A++D CK +L AAG+RA+GD+ +++SPGWKFNHWELKG
Sbjct: 702 EVVIIPCGITVTLPEAEKAAILDRCKQYERELKAAGIRAKGDFNEHHSPGWKFNHWELKG 761
Query: 207 VPVRVELGPKDIAKGTVVAVQRLTGDKMVFKRDSVAKDIVELLDKTHAQMFE 362
VP+R+E+GP+D+ V V+R K + + I E L+ +MFE
Sbjct: 762 VPIRIEVGPRDVKNNKFVLVRRHDRSKHTIQHEGFVGSIQETLEVIQNEMFE 813
Score = 49.6 bits (113), Expect = 3e-06
Identities = 22/50 (44%), Positives = 33/50 (66%)
Frame = +3
Query: 489 IKNDSARTEDDPNVDVKAPAMGAKSLCIPFEPPRQLSESDRCIHPACKNK 638
I+N+ TE+ ++ APAMGAK+LCIPF P Q++ +C+HP N+
Sbjct: 807 IQNEMFETEEV--LEPGAPAMGAKALCIPFNQPAQITADTKCVHPDLVNE 854
>SB_28963| Best HMM Match : AAR2 (HMM E-Value=0)
Length = 336
Score = 35.5 bits (78), Expect = 0.046
Identities = 33/124 (26%), Positives = 55/124 (44%), Gaps = 8/124 (6%)
Frame = +3
Query: 279 GDKMVFKRDSVAKDIV-ELLDKTHAQMFERATKDRDARLSSVT-----KWEDFTAALEEK 440
GD +V K D +D+V E + + + K+ D L KW T+ +
Sbjct: 77 GDIVVRKWDPAIEDLVNEKTSEEDLKKYRLGMKELDTYLGPYPFENHKKWLSLTSHISA- 135
Query: 441 NIL--LAPFCGEISCEDNIKNDSARTEDDPNVDVKAPAMGAKSLCIPFEPPRQLSESDRC 614
NIL L P CG+IS I+++ + + +D+ P + SL + + +E RC
Sbjct: 136 NILARLEPDCGQISSVTQIQSEDSPDDGSSQMDIDEPTLNV-SLQQNEKSRIKFTEIPRC 194
Query: 615 IHPA 626
+PA
Sbjct: 195 KYPA 198
>SB_13244| Best HMM Match : HGTP_anticodon (HMM E-Value=1e-21)
Length = 518
Score = 35.1 bits (77), Expect = 0.061
Identities = 23/74 (31%), Positives = 40/74 (54%)
Frame = +3
Query: 108 LVNDLLAAGVRAEGDYRDNYSPGWKFNHWELKGVPVRVELGPKDIAKGTVVAVQRLTGDK 287
L ++L AGV+AE Y+ N +F E GVP+ + +G K++ +G V + ++
Sbjct: 440 LASELWEAGVKAEVLYKKNPKMLNQFQFCEEGGVPLCLVIGEKELEEGIVTLRDMESREE 499
Query: 288 MVFKRDSVAKDIVE 329
+ KR V DI++
Sbjct: 500 VSVKRADVC-DIIK 512
>SB_16018| Best HMM Match : Antimicrobial18 (HMM E-Value=0.89)
Length = 1494
Score = 31.5 bits (68), Expect = 0.76
Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 2/115 (1%)
Frame = -2
Query: 640 GLFLQAGCMQRSDSDNCLGGSNGMHSDFAPMAGALTSTLGSSSVLALSFLMLSS--HDIS 467
G+FL + + S + S+ SDF ++ +L+ L SSS L FL SS D
Sbjct: 310 GIFLPSDFLTSSSLPSDFLTSSSSLSDFLSLSSSLSDFLTSSS-LPSDFLTSSSSLSDFL 368
Query: 466 PQNGASKMFFSSRAAVKSSHLVTDDNRASRSFVALSNICACVLSRSSTMSFATES 302
+ F SS +++ S +T + S + S++ + S SS F T S
Sbjct: 369 TSSSLLSDFISSSSSL--SDFLTSSSSLSDFLTSSSSLSDFLTSSSSLSDFLTSS 421
Score = 29.9 bits (64), Expect = 2.3
Identities = 25/94 (26%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Frame = -2
Query: 580 SNGMHSDFAPMAGALTSTLGSSSVLALSFLMLSSHDISPQNGASKMFFSSRAAVKSSHLV 401
S+ + SDF + +L+ L SSS L+ SS + + + F + +++ S L
Sbjct: 480 SSSLPSDFLTSSSSLSDFLTSSSSLSDFLTSSSSLSVFYTSSSLPSDFLTSSSLPSDFLT 539
Query: 400 TDDNRASRSFVALSNICACVLSRSSTMS-FATES 302
+ + + F+ LS++ + L+ SS++S F T S
Sbjct: 540 SSSSLS--DFLTLSSLLSDFLTSSSSLSVFLTSS 571
Score = 29.9 bits (64), Expect = 2.3
Identities = 25/94 (26%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Frame = -2
Query: 580 SNGMHSDFAPMAGALTSTLGSSSVLALSFLMLSSHDISPQNGASKMFFSSRAAVKSSHLV 401
S+ + SDF + +L+ L SSS L+ SS + + + F + +++ S L
Sbjct: 725 SSSLPSDFLTSSSSLSDFLTSSSSLSDFLTSSSSLSVFYTSSSLPSDFLTSSSLPSDFLT 784
Query: 400 TDDNRASRSFVALSNICACVLSRSSTMS-FATES 302
+ + + F+ LS++ + L+ SS++S F T S
Sbjct: 785 SSSSLS--DFLTLSSLLSDFLTSSSSLSVFLTSS 816
Score = 29.9 bits (64), Expect = 2.3
Identities = 25/94 (26%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Frame = -2
Query: 580 SNGMHSDFAPMAGALTSTLGSSSVLALSFLMLSSHDISPQNGASKMFFSSRAAVKSSHLV 401
S+ + SDF + +L+ L SSS+L+ SS + P + + F + +++ S L
Sbjct: 1155 SSSLPSDFLTSSSSLSDFLTSSSLLSDFLTSSSSLSVFPTSSSLPSDFLTSSSLPSDFLT 1214
Query: 400 TDDNRASRSFVALSNICACVLSRSSTMS-FATES 302
+ + + F S++ + L+ SS++S F T S
Sbjct: 1215 SSSSLS--VFPTSSSLPSDFLTSSSSLSDFLTSS 1246
Score = 28.3 bits (60), Expect = 7.0
Identities = 33/133 (24%), Positives = 61/133 (45%), Gaps = 1/133 (0%)
Frame = -2
Query: 580 SNGMHSDFAPMAGALTSTLGSSSVLALSFLMLSSHDISPQNGASKMFFSSRAAVKSSHLV 401
S+ SDF + +L+ L SSS L+ SS + P + + F + +++ S L
Sbjct: 825 SSSSLSDFLTSSSSLSDFLTSSSSLSDFLTSSSSLSVFPTSSSLPSDFLTSSSLPSDFLT 884
Query: 400 TDDNRASRSFVALSNICACVLSRSSTMS-FATESRLKTILSPVRRCTATTVPFAISLGPN 224
+ + + F S++ + L+ SS++S F T S ++ P + + SL P+
Sbjct: 885 SSSSLS--VFPTSSSLPSDFLTSSSSLSDFLTSSSSLSVF-PTSSSLPSDFVTSSSL-PS 940
Query: 223 STLTGTPFNSQWL 185
LT + S +L
Sbjct: 941 DFLTSSSLPSDFL 953
Score = 27.9 bits (59), Expect = 9.3
Identities = 24/93 (25%), Positives = 43/93 (46%)
Frame = -2
Query: 580 SNGMHSDFAPMAGALTSTLGSSSVLALSFLMLSSHDISPQNGASKMFFSSRAAVKSSHLV 401
S G+ SDF + +L+ L SSS L+ SS + + +S F + +++ S +
Sbjct: 995 SRGLLSDFLTSSSSLSDFLTSSSSLSDFLTSSSSLRVFLTSSSSLSDFLTSSSLLSD-FI 1053
Query: 400 TDDNRASRSFVALSNICACVLSRSSTMSFATES 302
+ + S + S++ + S SS F T S
Sbjct: 1054 SSSSSLSDFLTSSSSLSDFLTSSSSLSDFLTSS 1086
>SB_38972| Best HMM Match : PIP5K (HMM E-Value=0)
Length = 426
Score = 30.3 bits (65), Expect = 1.7
Identities = 33/138 (23%), Positives = 62/138 (44%), Gaps = 6/138 (4%)
Frame = +3
Query: 216 RVELGPKDIAKGTVV----AVQRLTGDKMVFKRDSVAKDIVELL--DKTHAQMFERATKD 377
R+++ K KG+ V +++ T D FK + KD V+L+ D+ A + ER D
Sbjct: 205 RLKIHKKYDLKGSTVDRQASLKEKTRDNPTFKDNDFTKDNVKLVIGDEAKAVLVERIKAD 264
Query: 378 RDARLSSVTKWEDFTAALEEKNILLAPFCGEISCEDNIKNDSARTEDDPNVDVKAPAMGA 557
+ +S D++ + + LA G+ ++ + ++ ART+ + + +P
Sbjct: 265 VEFLIS--LNIMDYSLLVGIHDCDLAD-SGDDEDDEGVGDEEARTDSNEESESDSPQELN 321
Query: 558 KSLCIPFEPPRQLSESDR 611
S P PP +DR
Sbjct: 322 MSTTPPETPPTTPPANDR 339
>SB_33703| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 745
Score = 29.1 bits (62), Expect = 4.0
Identities = 31/122 (25%), Positives = 48/122 (39%), Gaps = 9/122 (7%)
Frame = -2
Query: 565 SDFAPMAGALTSTLGSS-SVLALSFLMLSSHDISPQNGASKMFF-----SSRAAVKSSHL 404
S++ P G L G + L +S++ HD++ + S + SS A S
Sbjct: 219 SNWDPNTGVLFYPNGPTLETLNMSYVSFDKHDLNSNSCNSNQLWKPSLRSSSKAFDVSGT 278
Query: 403 VTDDNRAS---RSFVALSNICACVLSRSSTMSFATESRLKTILSPVRRCTATTVPFAISL 233
+ N S R FV + +C + S S E K L+PV T P I++
Sbjct: 279 IRQVNAVSIWNRIFVGTRSRYSCCMFEVSRPS--DEDNEKVTLNPVESIACQTTPSCIAV 336
Query: 232 GP 227
P
Sbjct: 337 SP 338
>SB_31352| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 401
Score = 28.7 bits (61), Expect = 5.3
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -1
Query: 575 WYAQ*FRTHGWCLDINVRVVFCPC 504
W+ Q R C+D+ V FCPC
Sbjct: 344 WHLQDARICQICMDVEVATAFCPC 367
>SB_48621| Best HMM Match : SFT2 (HMM E-Value=6.6)
Length = 97
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = -1
Query: 284 ITGETLYCYNCTLCYILGT*FNSYWNPLQLPVVKLPARRIVIPVVAFGPHS 132
+ T++C+NC L YI T YW + +P +I ++A P S
Sbjct: 54 VNSTTIFCFNCVLFYIQAT----YW----FSISSIPGTADLIVLLALDPAS 96
>SB_40007| Best HMM Match : Arm (HMM E-Value=0.84)
Length = 274
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Frame = +1
Query: 583 LQDNCLNLTAAYTRLVKISPSSLRYLEE---VTEYNS 684
+Q NCL L T+L ISPS L YL++ VT+ N+
Sbjct: 224 VQMNCLELL---TKLASISPSGLEYLDQKGVVTKLNN 257
>SB_36891| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2124
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = -1
Query: 284 ITGETLYCYNCTLCYILGT*FNSYWNPLQLPVVKLPARRIVIPVVAFGPHS 132
+ T++C+NC L YI T YW + +P +I ++A P S
Sbjct: 1349 VNSTTIFCFNCVLFYIQAT----YW----FSISSIPGTADLIVLLALDPAS 1391
>SB_47847| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 347
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/23 (43%), Positives = 18/23 (78%)
Frame = +3
Query: 288 MVFKRDSVAKDIVELLDKTHAQM 356
++FK ++V +DIVE+L + HA +
Sbjct: 50 LIFKNENVNEDIVEILKRFHAYL 72
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 27.9 bits (59), Expect = 9.3
Identities = 21/56 (37%), Positives = 27/56 (48%)
Frame = -2
Query: 370 VALSNICACVLSRSSTMSFATESRLKTILSPVRRCTATTVPFAISLGPNSTLTGTP 203
V L+++C C LS ST S T S T +P T +T P S +LT TP
Sbjct: 627 VHLAHLCTCTLSTPSTPS--TPSTRSTPSTPSTPSTPST-PSTPSTPSTPSLTHTP 679
>SB_36215| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1427
Score = 27.9 bits (59), Expect = 9.3
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +3
Query: 465 GEISCEDNIKNDSARTEDDPNVDVKAPAMGAKSLCIPFEPPR 590
GE+ E+N++ S+ + N+ + P K LC P PPR
Sbjct: 1067 GELKSENNLRRSSSTGDIYENL--QHPLKCVKELCHPVAPPR 1106
>SB_20539| Best HMM Match : VWA (HMM E-Value=5.1848e-44)
Length = 262
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/27 (55%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = -3
Query: 90 LAPGARPP-SWTPLCRTEPPRPVSRRR 13
L P PP ++ PL T+PPRPV+RRR
Sbjct: 216 LPPLTFPPRTFAPL--TQPPRPVTRRR 240
>SB_7678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1432
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = -3
Query: 84 PGARPPSWTPLCRTEPPRPV-SRRRIGRP 1
P RP P+ PP PV S++R GRP
Sbjct: 1241 PRGRPRKQAPIQPLHPPGPVQSKKRFGRP 1269
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,208,617
Number of Sequences: 59808
Number of extensions: 493210
Number of successful extensions: 1636
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1476
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1635
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2034222073
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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