Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_L08
         (749 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ370040-1|ABD18601.1|  121|Anopheles gambiae putative TIL domai...    26   1.4  
DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1 pro...    25   1.9  
AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    24   4.4  

>DQ370040-1|ABD18601.1|  121|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 121

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = +3

Query: 456 PFCGEISCEDNIKNDSA-RTEDDPNVDVKAPAMGAKS-LCIP 575
           P CG+ +C +  KNDSA R   +P    +   +  KS  C+P
Sbjct: 72  PACGDRTCTNQRKNDSACRRSCNPGCFCRGGYVRNKSNRCVP 113


>DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1
           protein.
          Length = 545

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 17/38 (44%), Positives = 20/38 (52%)
 Frame = +3

Query: 60  SSSADERQALMDSCKALVNDLLAAGVRAEGDYRDNYSP 173
           SSSA ER  L+DS K      LA  +  +GDY   Y P
Sbjct: 421 SSSAFER--LLDSSKCTCPIALARRLDPKGDYVKRYLP 456


>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -1

Query: 539 LDINVRVVFCPCTVVLNVIFTRYLSTKWC 453
           +D+ V +V       L  +F RY+++ WC
Sbjct: 496 MDLLVTIVSTLILDFLRALFVRYMNSCWC 524


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 791,884
Number of Sequences: 2352
Number of extensions: 17499
Number of successful extensions: 30
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)