SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_L08
         (749 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X54326-1|CAA38224.1| 1440|Homo sapiens glutaminyl-tRNA synthetas...   203   5e-52
BC126275-1|AAI26276.1| 1512|Homo sapiens EPRS protein protein.        203   5e-52
AY493416-1|AAS72877.1| 1440|Homo sapiens proliferation-inducing ...   203   5e-52
U18937-1|AAA73974.1|  506|Homo sapiens histidyl-tRNA synthetase ...    36   0.21 
BC014982-1|AAH14982.1|  506|Homo sapiens histidyl-tRNA synthetas...    36   0.21 
BC007680-1|AAH07680.1|  506|Homo sapiens histidyl-tRNA synthetas...    36   0.21 
Z11518-1|CAA77607.1|  509|Homo sapiens histidyl-tRNA synthetase ...    33   1.4  
BC080514-1|AAH80514.1|  509|Homo sapiens histidyl-tRNA synthetas...    33   1.4  
BC011807-1|AAH11807.1|  509|Homo sapiens histidyl-tRNA synthetas...    33   1.4  
AY995220-1|AAX99363.1|  509|Homo sapiens histidyl-tRNA synthetas...    31   3.3  
AL049650-5|CAI22576.1|  706|Homo sapiens transglutaminase 6 prot...    31   5.8  
AL031678-1|CAI22901.1|  706|Homo sapiens transglutaminase 6 prot...    31   5.8  
AF540969-1|AAQ10751.1|  706|Homo sapiens transglutaminase y prot...    31   5.8  
AF363689-1|AAK73515.1| 1608|Homo sapiens capicua protein protein.      30   7.7  
AC006486-3|AAD11988.1| 1453|Homo sapiens BC85722_1 protein.            30   7.7  
AB002304-1|BAA20765.1| 1451|Homo sapiens KIAA0306 protein.             30   7.7  

>X54326-1|CAA38224.1| 1440|Homo sapiens glutaminyl-tRNA synthetase
            protein.
          Length = 1440

 Score =  203 bits (496), Expect = 5e-52
 Identities = 97/219 (44%), Positives = 136/219 (62%)
 Frame = +3

Query: 15   VAEIQAVVVPCGITASSSADERQALMDSCKALVNDLLAAGVRAEGDYRDNYSPGWKFNHW 194
            VA +Q V++PCGIT + S ++++AL+  C      LL+  +R   D RDNYSPGWKFNHW
Sbjct: 1227 VACVQVVIIPCGITNALSEEDKEALIAKCNDYRRRLLSVNIRVRADLRDNYSPGWKFNHW 1286

Query: 195  ELKGVPVRVELGPKDIAKGTVVAVQRLTGDKMVFKRDSVAKDIVELLDKTHAQMFERATK 374
            ELKGVP+R+E+GP+D+     VAV+R TG+K+    +     +  +L+     +F RA++
Sbjct: 1287 ELKGVPIRLEVGPRDMKSCQFVAVRRDTGEKLTVAENEAETKLQAILEDIQVTLFTRASE 1346

Query: 375  DRDARLSSVTKWEDFTAALEEKNILLAPFCGEISCEDNIKNDSARTEDDPNVDVKAPAMG 554
            D    +      EDF   L+   I+  PFCGEI CED IK  +AR +D   ++  AP+MG
Sbjct: 1347 DLKTHMVVANTMEDFQKILDSGKIVQIPFCGEIDCEDWIKKTTARDQD---LEPGAPSMG 1403

Query: 555  AKSLCIPFEPPRQLSESDRCIHPACKNKPKFITLFGRSY 671
            AKSLCIPF+P  +L    +C+    KN  K+ TLFGRSY
Sbjct: 1404 AKSLCIPFKPLCELQPGAKCV--CGKNPAKYYTLFGRSY 1440


>BC126275-1|AAI26276.1| 1512|Homo sapiens EPRS protein protein.
          Length = 1512

 Score =  203 bits (496), Expect = 5e-52
 Identities = 97/219 (44%), Positives = 136/219 (62%)
 Frame = +3

Query: 15   VAEIQAVVVPCGITASSSADERQALMDSCKALVNDLLAAGVRAEGDYRDNYSPGWKFNHW 194
            VA +Q V++PCGIT + S ++++AL+  C      LL+  +R   D RDNYSPGWKFNHW
Sbjct: 1299 VACVQVVIIPCGITNALSEEDKEALIAKCNDYRRRLLSVNIRVRADLRDNYSPGWKFNHW 1358

Query: 195  ELKGVPVRVELGPKDIAKGTVVAVQRLTGDKMVFKRDSVAKDIVELLDKTHAQMFERATK 374
            ELKGVP+R+E+GP+D+     VAV+R TG+K+    +     +  +L+     +F RA++
Sbjct: 1359 ELKGVPIRLEVGPRDMKSCQFVAVRRDTGEKLTVAENEAETKLQAILEDIQVTLFTRASE 1418

Query: 375  DRDARLSSVTKWEDFTAALEEKNILLAPFCGEISCEDNIKNDSARTEDDPNVDVKAPAMG 554
            D    +      EDF   L+   I+  PFCGEI CED IK  +AR +D   ++  AP+MG
Sbjct: 1419 DLKTHMVVANTMEDFQKILDSGKIVQIPFCGEIDCEDWIKKTTARDQD---LEPGAPSMG 1475

Query: 555  AKSLCIPFEPPRQLSESDRCIHPACKNKPKFITLFGRSY 671
            AKSLCIPF+P  +L    +C+    KN  K+ TLFGRSY
Sbjct: 1476 AKSLCIPFKPLCELQPGAKCV--CGKNPAKYYTLFGRSY 1512


>AY493416-1|AAS72877.1| 1440|Homo sapiens proliferation-inducing
            protein 32 protein.
          Length = 1440

 Score =  203 bits (496), Expect = 5e-52
 Identities = 97/219 (44%), Positives = 136/219 (62%)
 Frame = +3

Query: 15   VAEIQAVVVPCGITASSSADERQALMDSCKALVNDLLAAGVRAEGDYRDNYSPGWKFNHW 194
            VA +Q V++PCGIT + S ++++AL+  C      LL+  +R   D RDNYSPGWKFNHW
Sbjct: 1227 VACVQVVIIPCGITNALSEEDKEALIAKCNDYRRRLLSVNIRVRADLRDNYSPGWKFNHW 1286

Query: 195  ELKGVPVRVELGPKDIAKGTVVAVQRLTGDKMVFKRDSVAKDIVELLDKTHAQMFERATK 374
            ELKGVP+R+E+GP+D+     VAV+R TG+K+    +     +  +L+     +F RA++
Sbjct: 1287 ELKGVPIRLEVGPRDMKSCQFVAVRRDTGEKLTVAENEAETKLQAILEDIQVTLFTRASE 1346

Query: 375  DRDARLSSVTKWEDFTAALEEKNILLAPFCGEISCEDNIKNDSARTEDDPNVDVKAPAMG 554
            D    +      EDF   L+   I+  PFCGEI CED IK  +AR +D   ++  AP+MG
Sbjct: 1347 DLKTHMVVANTMEDFQKILDSGKIVQIPFCGEIDCEDWIKKTTARDQD---LEPGAPSMG 1403

Query: 555  AKSLCIPFEPPRQLSESDRCIHPACKNKPKFITLFGRSY 671
            AKSLCIPF+P  +L    +C+    KN  K+ TLFGRSY
Sbjct: 1404 AKSLCIPFKPLCELQPGAKCV--CGKNPAKYYTLFGRSY 1440


>U18937-1|AAA73974.1|  506|Homo sapiens histidyl-tRNA synthetase
           homologue protein.
          Length = 506

 Score = 35.5 bits (78), Expect = 0.21
 Identities = 17/79 (21%), Positives = 45/79 (56%)
 Frame = +3

Query: 108 LVNDLLAAGVRAEGDYRDNYSPGWKFNHWELKGVPVRVELGPKDIAKGTVVAVQRLTGDK 287
           L+ +L  +G++AE  Y++N     + ++ E  G+P+ V +G +++ +G +      + ++
Sbjct: 428 LIAELWDSGIKAEMLYKNNPKLLTQLHYCESTGIPLVVIIGEQELKEGVIKIRSVASREE 487

Query: 288 MVFKRDSVAKDIVELLDKT 344
           +  KR++   +I + L ++
Sbjct: 488 VAIKRENFVAEIQKRLSES 506


>BC014982-1|AAH14982.1|  506|Homo sapiens histidyl-tRNA synthetase
           2, mitochondrial (putative) protein.
          Length = 506

 Score = 35.5 bits (78), Expect = 0.21
 Identities = 17/79 (21%), Positives = 45/79 (56%)
 Frame = +3

Query: 108 LVNDLLAAGVRAEGDYRDNYSPGWKFNHWELKGVPVRVELGPKDIAKGTVVAVQRLTGDK 287
           L+ +L  +G++AE  Y++N     + ++ E  G+P+ V +G +++ +G +      + ++
Sbjct: 428 LIAELWDSGIKAEMLYKNNPKLLTQLHYCESTGIPLVVIIGEQELKEGVIKIRSVASREE 487

Query: 288 MVFKRDSVAKDIVELLDKT 344
           +  KR++   +I + L ++
Sbjct: 488 VAIKRENFVAEIQKRLSES 506


>BC007680-1|AAH07680.1|  506|Homo sapiens histidyl-tRNA synthetase
           2, mitochondrial (putative) protein.
          Length = 506

 Score = 35.5 bits (78), Expect = 0.21
 Identities = 17/79 (21%), Positives = 45/79 (56%)
 Frame = +3

Query: 108 LVNDLLAAGVRAEGDYRDNYSPGWKFNHWELKGVPVRVELGPKDIAKGTVVAVQRLTGDK 287
           L+ +L  +G++AE  Y++N     + ++ E  G+P+ V +G +++ +G +      + ++
Sbjct: 428 LIAELWDSGIKAEMLYKNNPKLLTQLHYCESTGIPLVVIIGEQELKEGVIKIRSVASREE 487

Query: 288 MVFKRDSVAKDIVELLDKT 344
           +  KR++   +I + L ++
Sbjct: 488 VAIKRENFVAEIQKRLSES 506


>Z11518-1|CAA77607.1|  509|Homo sapiens histidyl-tRNA synthetase
           protein.
          Length = 509

 Score = 32.7 bits (71), Expect = 1.4
 Identities = 18/85 (21%), Positives = 45/85 (52%)
 Frame = +3

Query: 69  ADERQALMDSCKALVNDLLAAGVRAEGDYRDNYSPGWKFNHWELKGVPVRVELGPKDIAK 248
           A  ++ L++    LV++L  AG++AE  Y+ N     +  + E  G+P+   +G +++  
Sbjct: 414 ASAQKKLLEERLKLVSELWDAGIKAELLYKKNPKLLNQLQYCEEAGIPLVAIIGEQELKD 473

Query: 249 GTVVAVQRLTGDKMVFKRDSVAKDI 323
           G +      + +++  +R+ + ++I
Sbjct: 474 GVIKLRSVTSREEVDVRREDLVEEI 498


>BC080514-1|AAH80514.1|  509|Homo sapiens histidyl-tRNA synthetase
           protein.
          Length = 509

 Score = 32.7 bits (71), Expect = 1.4
 Identities = 18/85 (21%), Positives = 45/85 (52%)
 Frame = +3

Query: 69  ADERQALMDSCKALVNDLLAAGVRAEGDYRDNYSPGWKFNHWELKGVPVRVELGPKDIAK 248
           A  ++ L++    LV++L  AG++AE  Y+ N     +  + E  G+P+   +G +++  
Sbjct: 414 ASAQKKLLEERLKLVSELWDAGIKAELLYKKNPKLLNQLQYCEEAGIPLVAIIGEQELKD 473

Query: 249 GTVVAVQRLTGDKMVFKRDSVAKDI 323
           G +      + +++  +R+ + ++I
Sbjct: 474 GVIKLRSVTSREEVDVRREDLVEEI 498


>BC011807-1|AAH11807.1|  509|Homo sapiens histidyl-tRNA synthetase
           protein.
          Length = 509

 Score = 32.7 bits (71), Expect = 1.4
 Identities = 18/85 (21%), Positives = 45/85 (52%)
 Frame = +3

Query: 69  ADERQALMDSCKALVNDLLAAGVRAEGDYRDNYSPGWKFNHWELKGVPVRVELGPKDIAK 248
           A  ++ L++    LV++L  AG++AE  Y+ N     +  + E  G+P+   +G +++  
Sbjct: 414 ASAQKKLLEERLKLVSELWDAGIKAELLYKKNPKLLNQLQYCEEAGIPLVAIIGEQELKD 473

Query: 249 GTVVAVQRLTGDKMVFKRDSVAKDI 323
           G +      + +++  +R+ + ++I
Sbjct: 474 GVIKLRSVTSREEVDVRREDLVEEI 498


>AY995220-1|AAX99363.1|  509|Homo sapiens histidyl-tRNA synthetase
           protein.
          Length = 509

 Score = 31.5 bits (68), Expect = 3.3
 Identities = 18/85 (21%), Positives = 44/85 (51%)
 Frame = +3

Query: 69  ADERQALMDSCKALVNDLLAAGVRAEGDYRDNYSPGWKFNHWELKGVPVRVELGPKDIAK 248
           A  ++ L++    LV++L  AG++AE  Y+ N     +  + E  G P+   +G +++  
Sbjct: 414 ASAQKKLLEERLKLVSELWDAGIKAELLYKKNPKLLNQLQYCEEAGTPLVAIIGEQELKD 473

Query: 249 GTVVAVQRLTGDKMVFKRDSVAKDI 323
           G +      + +++  +R+ + ++I
Sbjct: 474 GVIKLRSVTSREEVDVRREDLVEEI 498


>AL049650-5|CAI22576.1|  706|Homo sapiens transglutaminase 6
           protein.
          Length = 706

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
 Frame = +3

Query: 315 KDIVELLDKTHAQMFERATKDRDARLSSVTKW-EDFTAALEEKNILLAPFCGEISCEDNI 491
           K + E+L ++HA       + R     S +K+ ED T   E+K ILLA  C     E  +
Sbjct: 541 KPVAEILHESHAVRLGPQEEKRIPITISYSKYKEDLT---EDKKILLAAMCLVTKGEKLL 597

Query: 492 KNDSARTEDDPNVDVKAPAM 551
                  ED   + V  PAM
Sbjct: 598 VEKDITLEDFITIKVLGPAM 617


>AL031678-1|CAI22901.1|  706|Homo sapiens transglutaminase 6
           protein.
          Length = 706

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
 Frame = +3

Query: 315 KDIVELLDKTHAQMFERATKDRDARLSSVTKW-EDFTAALEEKNILLAPFCGEISCEDNI 491
           K + E+L ++HA       + R     S +K+ ED T   E+K ILLA  C     E  +
Sbjct: 541 KPVAEILHESHAVRLGPQEEKRIPITISYSKYKEDLT---EDKKILLAAMCLVTKGEKLL 597

Query: 492 KNDSARTEDDPNVDVKAPAM 551
                  ED   + V  PAM
Sbjct: 598 VEKDITLEDFITIKVLGPAM 617


>AF540969-1|AAQ10751.1|  706|Homo sapiens transglutaminase y
           protein.
          Length = 706

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
 Frame = +3

Query: 315 KDIVELLDKTHAQMFERATKDRDARLSSVTKW-EDFTAALEEKNILLAPFCGEISCEDNI 491
           K + E+L ++HA       + R     S +K+ ED T   E+K ILLA  C     E  +
Sbjct: 541 KPVAEILHESHAVRLGPQEEKRIPITISYSKYKEDLT---EDKKILLAAMCLVTKGEKLL 597

Query: 492 KNDSARTEDDPNVDVKAPAM 551
                  ED   + V  PAM
Sbjct: 598 VEKDITLEDFITIKVLGPAM 617


>AF363689-1|AAK73515.1| 1608|Homo sapiens capicua protein protein.
          Length = 1608

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -3

Query: 96   SPLAPGARPPSWTPLCRTEPPRP 28
            +P AP   P +WTP  R+ PP P
Sbjct: 1228 TPPAPPPLPETWTPTARSSPPLP 1250


>AC006486-3|AAD11988.1| 1453|Homo sapiens BC85722_1 protein.
          Length = 1453

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -3

Query: 96   SPLAPGARPPSWTPLCRTEPPRP 28
            +P AP   P +WTP  R+ PP P
Sbjct: 1073 TPPAPPPLPETWTPTARSSPPLP 1095


>AB002304-1|BAA20765.1| 1451|Homo sapiens KIAA0306 protein.
          Length = 1451

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -3

Query: 96   SPLAPGARPPSWTPLCRTEPPRP 28
            +P AP   P +WTP  R+ PP P
Sbjct: 1071 TPPAPPPLPETWTPTARSSPPLP 1093


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,804,847
Number of Sequences: 237096
Number of extensions: 2396496
Number of successful extensions: 6438
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 6130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6426
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -