Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_L08
(749 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 25 0.57
AF393494-1|AAL60419.1| 144|Apis mellifera odorant binding prote... 23 3.1
AF166496-1|AAD51944.1| 144|Apis mellifera pheromone-binding pro... 23 3.1
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.0
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.0
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.0
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.0
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.0
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.0
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 4.0
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 4.0
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 22 5.3
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 22 5.3
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 5.3
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 5.3
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 21 9.3
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 9.3
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 25.4 bits (53), Expect = 0.57
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = +3
Query: 345 HAQMFERATKDRDARLSSVTKWEDFTAALEEKN 443
HA + TKD+ V +W DF E+N
Sbjct: 257 HASLNHTLTKDQPETYELVKEWRDFVDNYAEEN 289
Score = 22.6 bits (46), Expect = 4.0
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = -2
Query: 319 SFATESRLKTILSPVRRCTATTVPFAISLGPNSTL 215
+F E KT+L+ VR+ V I+ N+T+
Sbjct: 481 NFTIEILNKTVLAVVRQSEEEAVSLLINFSKNNTI 515
>AF393494-1|AAL60419.1| 144|Apis mellifera odorant binding protein
ASP1 protein.
Length = 144
Score = 23.0 bits (47), Expect = 3.1
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = -2
Query: 667 LLPNNVMNLGLFLQAGCMQRSDSDNC 590
LLP+ + + C+ S SDNC
Sbjct: 98 LLPDQLQERAQSVMGKCLPTSGSDNC 123
>AF166496-1|AAD51944.1| 144|Apis mellifera pheromone-binding
protein ASP1 protein.
Length = 144
Score = 23.0 bits (47), Expect = 3.1
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = -2
Query: 667 LLPNNVMNLGLFLQAGCMQRSDSDNC 590
LLP+ + + C+ S SDNC
Sbjct: 98 LLPDQLQERAQSVMGKCLPTSGSDNC 123
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.0
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +1
Query: 127 PPE*GPKATTGITIRLA 177
PP+ G K T G+TI L+
Sbjct: 219 PPDSGEKLTLGVTILLS 235
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.0
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +1
Query: 127 PPE*GPKATTGITIRLA 177
PP+ G K T G+TI L+
Sbjct: 219 PPDSGEKLTLGVTILLS 235
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.0
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +1
Query: 127 PPE*GPKATTGITIRLA 177
PP+ G K T G+TI L+
Sbjct: 219 PPDSGEKLTLGVTILLS 235
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.0
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +1
Query: 127 PPE*GPKATTGITIRLA 177
PP+ G K T G+TI L+
Sbjct: 219 PPDSGEKLTLGVTILLS 235
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.0
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +1
Query: 127 PPE*GPKATTGITIRLA 177
PP+ G K T G+TI L+
Sbjct: 219 PPDSGEKLTLGVTILLS 235
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.0
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +1
Query: 127 PPE*GPKATTGITIRLA 177
PP+ G K T G+TI L+
Sbjct: 219 PPDSGEKLTLGVTILLS 235
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.6 bits (46), Expect = 4.0
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +1
Query: 127 PPE*GPKATTGITIRLA 177
PP+ G K T G+TI L+
Sbjct: 287 PPDSGEKLTLGVTILLS 303
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.6 bits (46), Expect = 4.0
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +1
Query: 127 PPE*GPKATTGITIRLA 177
PP+ G K T G+TI L+
Sbjct: 287 PPDSGEKLTLGVTILLS 303
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 22.2 bits (45), Expect = 5.3
Identities = 14/47 (29%), Positives = 20/47 (42%)
Frame = +3
Query: 87 LMDSCKALVNDLLAAGVRAEGDYRDNYSPGWKFNHWELKGVPVRVEL 227
+ D+ + N AA + Y NYS W H LKG+ + L
Sbjct: 237 IFDNATIVNNGPEAAKMAKAFTYTYNYSMYWGQGHAILKGLKTSIIL 283
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 22.2 bits (45), Expect = 5.3
Identities = 10/34 (29%), Positives = 22/34 (64%)
Frame = -2
Query: 487 LSSHDISPQNGASKMFFSSRAAVKSSHLVTDDNR 386
++++D +P++ M+ SR SHL++++NR
Sbjct: 325 VATYDNTPRDFPYYMY--SREQYSQSHLISNENR 356
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 22.2 bits (45), Expect = 5.3
Identities = 10/28 (35%), Positives = 19/28 (67%), Gaps = 3/28 (10%)
Frame = +3
Query: 513 EDDPNV---DVKAPAMGAKSLCIPFEPP 587
ED P++ DV+ A+ ++SL + ++PP
Sbjct: 1108 EDVPSIPPEDVRCAALTSQSLQVSWQPP 1135
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 22.2 bits (45), Expect = 5.3
Identities = 10/28 (35%), Positives = 19/28 (67%), Gaps = 3/28 (10%)
Frame = +3
Query: 513 EDDPNV---DVKAPAMGAKSLCIPFEPP 587
ED P++ DV+ A+ ++SL + ++PP
Sbjct: 1104 EDVPSIPPEDVRCAALTSQSLQVSWQPP 1131
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 21.4 bits (43), Expect = 9.3
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +3
Query: 204 GVPVRVELGPKDIAKGTVVAVQR 272
G VRV LGPK +G +++ +
Sbjct: 532 GAVVRVFLGPKHDHQGRPISISK 554
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.4 bits (43), Expect = 9.3
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = +3
Query: 528 VDVKAPAMGAKSLCIPFEPPRQ 593
+ +KA M ++S+ + + PP Q
Sbjct: 1184 IAIKALVMSSESILVSWRPPSQ 1205
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,944
Number of Sequences: 438
Number of extensions: 4450
Number of successful extensions: 24
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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