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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_L07
         (785 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z18853-1|CAA79305.1|  282|Caenorhabditis elegans capping protein...   240   7e-64
Z18805-1|CAA79269.1|  282|Caenorhabditis elegans capping protein...   240   7e-64
U41011-3|AAA82286.1|  282|Caenorhabditis elegans Cap-z protein p...   240   7e-64
Z83103-9|CAI79157.1|  376|Caenorhabditis elegans Hypothetical pr...    30   2.2  
Z99281-48|CAE18025.2|  661|Caenorhabditis elegans Hypothetical p...    29   2.9  
Z70271-4|CAA94235.1| 1026|Caenorhabditis elegans Hypothetical pr...    29   5.0  
Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical p...    28   6.6  
Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical p...    28   6.6  
Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical pr...    28   6.6  
Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical pr...    28   6.6  
AL132951-13|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical...    28   6.6  
AL132951-12|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical...    28   6.6  
AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin ...    28   6.6  
AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin ...    28   6.6  
AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein.      28   6.6  
Z75525-7|CAH10769.1|  573|Caenorhabditis elegans Hypothetical pr...    28   8.7  
Z75525-6|CAA99765.2|  623|Caenorhabditis elegans Hypothetical pr...    28   8.7  
Z48582-1|CAA88465.1|  490|Caenorhabditis elegans Hypothetical pr...    28   8.7  
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist...    28   8.7  
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele...    28   8.7  
AL110500-22|CAB60434.1| 1628|Caenorhabditis elegans Hypothetical...    28   8.7  
AL032650-3|CAA21704.2| 1628|Caenorhabditis elegans Hypothetical ...    28   8.7  
AF003925-1|AAB61344.1|  573|Caenorhabditis elegans mRNA capping ...    28   8.7  
AC006834-9|AAL11490.1|  447|Caenorhabditis elegans Hypothetical ...    28   8.7  

>Z18853-1|CAA79305.1|  282|Caenorhabditis elegans capping protein
           alpha subunit protein.
          Length = 282

 Score =  240 bits (588), Expect = 7e-64
 Identities = 125/244 (51%), Positives = 159/244 (65%), Gaps = 7/244 (2%)
 Frame = +3

Query: 72  ISDQEKVRIVSDFILHSPPGEFNEVFNDVRVLLNNDTLLKEGAIGAFAQYNKDQLTPVRL 251
           ISD EKVRI SDFI H+PPGEFNEVFN VR+LL ND LLK   + A AQYN  Q  PV+L
Sbjct: 4   ISDAEKVRIASDFIKHAPPGEFNEVFNSVRMLLENDDLLKNKCVNAIAQYNVGQFVPVKL 63

Query: 252 EGSELYTLITDHNELGGGRFFDPRSKCSFRYDHLRKEASEYEPYEPDRA-AEPWRAALDE 428
           +G    TLIT +N+LG GRF+D  SK SF+YDH+RKEA++ +P+  +    E WR AL  
Sbjct: 64  DGVAKQTLITPYNDLGNGRFYDEVSKKSFKYDHVRKEAADLQPHPAESGITEQWRQALQT 123

Query: 429 ELTAYVAAHY-KHGASLVVGRTVDSGTVQLVACIEDHQFQPKNYWNGRWRSVWSLTVG-- 599
           +L  Y+  HY K G  +V  R   +G   +  CIE HQFQPKN+ NGRWRS W++ VG  
Sbjct: 124 QLDIYIDDHYAKSGTGVVFAR---NGVFTI--CIESHQFQPKNFCNGRWRSEWNVPVGDG 178

Query: 600 -GPATELRGTLRVQVHYYEDGNVQLVSSKE--IKAPLVAXGEVATAKEFVRLVSDAXNTY 770
              + E++G +  QVHYYEDGNVQL S KE  +K  + A  +  TAKE +  +S+    Y
Sbjct: 179 KSGSQEMKGKILSQVHYYEDGNVQLFSEKEPVLKVNVSADFD-KTAKEIIHAISEEETIY 237

Query: 771 QTAI 782
           Q A+
Sbjct: 238 QNAV 241


>Z18805-1|CAA79269.1|  282|Caenorhabditis elegans capping protein
           alpha subunit protein.
          Length = 282

 Score =  240 bits (588), Expect = 7e-64
 Identities = 125/244 (51%), Positives = 159/244 (65%), Gaps = 7/244 (2%)
 Frame = +3

Query: 72  ISDQEKVRIVSDFILHSPPGEFNEVFNDVRVLLNNDTLLKEGAIGAFAQYNKDQLTPVRL 251
           ISD EKVRI SDFI H+PPGEFNEVFN VR+LL ND LLK   + A AQYN  Q  PV+L
Sbjct: 4   ISDAEKVRIASDFIKHAPPGEFNEVFNSVRMLLENDDLLKNKCVNAIAQYNVGQFVPVKL 63

Query: 252 EGSELYTLITDHNELGGGRFFDPRSKCSFRYDHLRKEASEYEPYEPDRA-AEPWRAALDE 428
           +G    TLIT +N+LG GRF+D  SK SF+YDH+RKEA++ +P+  +    E WR AL  
Sbjct: 64  DGVAKQTLITPYNDLGNGRFYDEVSKKSFKYDHVRKEAADLQPHPAESGITEQWRQALQT 123

Query: 429 ELTAYVAAHY-KHGASLVVGRTVDSGTVQLVACIEDHQFQPKNYWNGRWRSVWSLTVG-- 599
           +L  Y+  HY K G  +V  R   +G   +  CIE HQFQPKN+ NGRWRS W++ VG  
Sbjct: 124 QLDIYIDDHYAKSGTGVVFAR---NGVFTI--CIESHQFQPKNFCNGRWRSEWNVPVGDG 178

Query: 600 -GPATELRGTLRVQVHYYEDGNVQLVSSKE--IKAPLVAXGEVATAKEFVRLVSDAXNTY 770
              + E++G +  QVHYYEDGNVQL S KE  +K  + A  +  TAKE +  +S+    Y
Sbjct: 179 KSGSQEMKGKILSQVHYYEDGNVQLFSEKEPVLKVNVSADFD-KTAKEIIHAISEEETIY 237

Query: 771 QTAI 782
           Q A+
Sbjct: 238 QNAV 241


>U41011-3|AAA82286.1|  282|Caenorhabditis elegans Cap-z protein
           protein 1 protein.
          Length = 282

 Score =  240 bits (588), Expect = 7e-64
 Identities = 125/244 (51%), Positives = 159/244 (65%), Gaps = 7/244 (2%)
 Frame = +3

Query: 72  ISDQEKVRIVSDFILHSPPGEFNEVFNDVRVLLNNDTLLKEGAIGAFAQYNKDQLTPVRL 251
           ISD EKVRI SDFI H+PPGEFNEVFN VR+LL ND LLK   + A AQYN  Q  PV+L
Sbjct: 4   ISDAEKVRIASDFIKHAPPGEFNEVFNSVRMLLENDDLLKNKCVNAIAQYNVGQFVPVKL 63

Query: 252 EGSELYTLITDHNELGGGRFFDPRSKCSFRYDHLRKEASEYEPYEPDRA-AEPWRAALDE 428
           +G    TLIT +N+LG GRF+D  SK SF+YDH+RKEA++ +P+  +    E WR AL  
Sbjct: 64  DGVAKQTLITPYNDLGNGRFYDEVSKKSFKYDHVRKEAADLQPHPAESGITEQWRQALQT 123

Query: 429 ELTAYVAAHY-KHGASLVVGRTVDSGTVQLVACIEDHQFQPKNYWNGRWRSVWSLTVG-- 599
           +L  Y+  HY K G  +V  R   +G   +  CIE HQFQPKN+ NGRWRS W++ VG  
Sbjct: 124 QLDIYIDDHYAKSGTGVVFAR---NGVFTI--CIESHQFQPKNFCNGRWRSEWNVPVGDG 178

Query: 600 -GPATELRGTLRVQVHYYEDGNVQLVSSKE--IKAPLVAXGEVATAKEFVRLVSDAXNTY 770
              + E++G +  QVHYYEDGNVQL S KE  +K  + A  +  TAKE +  +S+    Y
Sbjct: 179 KSGSQEMKGKILSQVHYYEDGNVQLFSEKEPVLKVNVSADFD-KTAKEIIHAISEEETIY 237

Query: 771 QTAI 782
           Q A+
Sbjct: 238 QNAV 241


>Z83103-9|CAI79157.1|  376|Caenorhabditis elegans Hypothetical
           protein D1025.10 protein.
          Length = 376

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +3

Query: 360 EASEYEPYEPDRAAEPWRAALDEELT 437
           E  E EP  P+ +   WR+ +DEELT
Sbjct: 80  EVPEREPSTPNNSRSNWRSDMDEELT 105


>Z99281-48|CAE18025.2|  661|Caenorhabditis elegans Hypothetical
           protein Y57G11C.42 protein.
          Length = 661

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 23/66 (34%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
 Frame = -3

Query: 588 KTTPNATD-RSNSSWVETGDLRYRRPAVPYQSRLCDPPLN*HHACSVQPRTPLAPHQVPP 412
           +TTP+    R   S V  GD  Y     P ++ + D P       S  P  PL P Q PP
Sbjct: 196 RTTPDPRIIRPPESLVVIGD--YDEDEPPSENAVVDSPQP--FVTSPPPAQPLFPQQTPP 251

Query: 411 AKAQPL 394
             A PL
Sbjct: 252 PPASPL 257


>Z70271-4|CAA94235.1| 1026|Caenorhabditis elegans Hypothetical
           protein W08D2.7 protein.
          Length = 1026

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 16/85 (18%), Positives = 40/85 (47%)
 Frame = +3

Query: 225 KDQLTPVRLEGSELYTLITDHNELGGGRFFDPRSKCSFRYDHLRKEASEYEPYEPDRAAE 404
           ++++   R+E   ++T+ TD+          P ++ +   ++   E ++Y P++ D   +
Sbjct: 72  EEEVEEARMENIIVHTIRTDNENCTHEVAIPPNAEFAELRENSGTEPAKYYPFQLDAFQK 131

Query: 405 PWRAALDEELTAYVAAHYKHGASLV 479
                +D   +  V+AH   G ++V
Sbjct: 132 QAILCIDNNQSVLVSAHTSAGKTVV 156


>Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical
            protein JC8.10b protein.
          Length = 1119

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 22/68 (32%), Positives = 26/68 (38%)
 Frame = -3

Query: 585  TTPNATDRSNSSWVETGDLRYRRPAVPYQSRLCDPPLN*HHACSVQPRTPLAPHQVPPAK 406
            T  ++   +NSSW E     +  P  P QS     P     AC   P T  AP   PP  
Sbjct: 1028 TRASSASLANSSWYE-----HVPPLAPPQSNNNKSP---PQACLFNPFTQSAPSPAPPPS 1079

Query: 405  AQPLDRAR 382
              PL   R
Sbjct: 1080 TIPLPPTR 1087


>Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical
            protein JC8.10a protein.
          Length = 1113

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 22/68 (32%), Positives = 26/68 (38%)
 Frame = -3

Query: 585  TTPNATDRSNSSWVETGDLRYRRPAVPYQSRLCDPPLN*HHACSVQPRTPLAPHQVPPAK 406
            T  ++   +NSSW E     +  P  P QS     P     AC   P T  AP   PP  
Sbjct: 1022 TRASSASLANSSWYE-----HVPPLAPPQSNNNKSP---PQACLFNPFTQSAPSPAPPPS 1073

Query: 405  AQPLDRAR 382
              PL   R
Sbjct: 1074 TIPLPPTR 1081


>Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical
           protein K04G2.8b protein.
          Length = 1188

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
 Frame = +3

Query: 279 TDHNELGGGRFFDPRSKCSFRYDHLRKEASEYEPYEPD--RAAEPWRAALDEELTAYVAA 452
           T  N  G G +  PR+  S R  ++R + S+ +  E    R  E     +D+ +T  +++
Sbjct: 16  TGSNTGGSGIYSQPRAGSSKRTSNVRHDVSDVDDEEEHYARFREDTAIEVDDAITVLLSS 75

Query: 453 -HYKHGASLV 479
            H++H   +V
Sbjct: 76  LHFEHKRDIV 85


>Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical
           protein K04G2.8a protein.
          Length = 1186

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
 Frame = +3

Query: 279 TDHNELGGGRFFDPRSKCSFRYDHLRKEASEYEPYEPD--RAAEPWRAALDEELTAYVAA 452
           T  N  G G +  PR+  S R  ++R + S+ +  E    R  E     +D+ +T  +++
Sbjct: 16  TGSNTGGSGIYSQPRAGSSKRTSNVRHDVSDVDDEEEHYARFREDTAIEVDDAITVLLSS 75

Query: 453 -HYKHGASLV 479
            H++H   +V
Sbjct: 76  LHFEHKRDIV 85


>AL132951-13|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical
            protein JC8.10b protein.
          Length = 1119

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 22/68 (32%), Positives = 26/68 (38%)
 Frame = -3

Query: 585  TTPNATDRSNSSWVETGDLRYRRPAVPYQSRLCDPPLN*HHACSVQPRTPLAPHQVPPAK 406
            T  ++   +NSSW E     +  P  P QS     P     AC   P T  AP   PP  
Sbjct: 1028 TRASSASLANSSWYE-----HVPPLAPPQSNNNKSP---PQACLFNPFTQSAPSPAPPPS 1079

Query: 405  AQPLDRAR 382
              PL   R
Sbjct: 1080 TIPLPPTR 1087


>AL132951-12|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical
            protein JC8.10a protein.
          Length = 1113

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 22/68 (32%), Positives = 26/68 (38%)
 Frame = -3

Query: 585  TTPNATDRSNSSWVETGDLRYRRPAVPYQSRLCDPPLN*HHACSVQPRTPLAPHQVPPAK 406
            T  ++   +NSSW E     +  P  P QS     P     AC   P T  AP   PP  
Sbjct: 1022 TRASSASLANSSWYE-----HVPPLAPPQSNNNKSP---PQACLFNPFTQSAPSPAPPPS 1073

Query: 405  AQPLDRAR 382
              PL   R
Sbjct: 1074 TIPLPPTR 1081


>AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin
            UNC-26B protein.
          Length = 1113

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 22/68 (32%), Positives = 26/68 (38%)
 Frame = -3

Query: 585  TTPNATDRSNSSWVETGDLRYRRPAVPYQSRLCDPPLN*HHACSVQPRTPLAPHQVPPAK 406
            T  ++   +NSSW E     +  P  P QS     P     AC   P T  AP   PP  
Sbjct: 1022 TRASSASLANSSWYE-----HVPPLAPPQSNNNKSP---PQACLFNPFTQSAPSPAPPPS 1073

Query: 405  AQPLDRAR 382
              PL   R
Sbjct: 1074 TIPLPPTR 1081


>AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin
            UNC-26A protein.
          Length = 1119

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 22/68 (32%), Positives = 26/68 (38%)
 Frame = -3

Query: 585  TTPNATDRSNSSWVETGDLRYRRPAVPYQSRLCDPPLN*HHACSVQPRTPLAPHQVPPAK 406
            T  ++   +NSSW E     +  P  P QS     P     AC   P T  AP   PP  
Sbjct: 1028 TRASSASLANSSWYE-----HVPPLAPPQSNNNKSP---PQACLFNPFTQSAPSPAPPPS 1079

Query: 405  AQPLDRAR 382
              PL   R
Sbjct: 1080 TIPLPPTR 1087


>AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein.
          Length = 1186

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
 Frame = +3

Query: 279 TDHNELGGGRFFDPRSKCSFRYDHLRKEASEYEPYEPD--RAAEPWRAALDEELTAYVAA 452
           T  N  G G +  PR+  S R  ++R + S+ +  E    R  E     +D+ +T  +++
Sbjct: 16  TGSNTGGSGIYSQPRAGSSKRTSNVRHDVSDVDDEEEHYARFREDTAIEVDDAITVLLSS 75

Query: 453 -HYKHGASLV 479
            H++H   +V
Sbjct: 76  LHFEHKRDIV 85


>Z75525-7|CAH10769.1|  573|Caenorhabditis elegans Hypothetical
           protein C03D6.3b protein.
          Length = 573

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 12/55 (21%), Positives = 27/55 (49%)
 Frame = +3

Query: 303 GRFFDPRSKCSFRYDHLRKEASEYEPYEPDRAAEPWRAALDEELTAYVAAHYKHG 467
           G F + R K  ++ D++    + Y+P E D+   P +   + E++  ++    +G
Sbjct: 152 GEFAENRQKGIYKQDYIDDLFARYDPTEDDKILAPEKPDWEREMSIGMSTQIDNG 206


>Z75525-6|CAA99765.2|  623|Caenorhabditis elegans Hypothetical
           protein C03D6.3a protein.
          Length = 623

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 12/55 (21%), Positives = 27/55 (49%)
 Frame = +3

Query: 303 GRFFDPRSKCSFRYDHLRKEASEYEPYEPDRAAEPWRAALDEELTAYVAAHYKHG 467
           G F + R K  ++ D++    + Y+P E D+   P +   + E++  ++    +G
Sbjct: 164 GEFAENRQKGIYKQDYIDDLFARYDPTEDDKILAPEKPDWEREMSIGMSTQIDNG 218


>Z48582-1|CAA88465.1|  490|Caenorhabditis elegans Hypothetical
           protein F27E5.3 protein.
          Length = 490

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 13/51 (25%), Positives = 28/51 (54%)
 Frame = +3

Query: 99  VSDFILHSPPGEFNEVFNDVRVLLNNDTLLKEGAIGAFAQYNKDQLTPVRL 251
           +++ ILHSPP +F+ + +  +   ++     +  +    QY  D ++PV+L
Sbjct: 329 ITNPILHSPPSKFDNIPSPPKAFSDDLRKSPDDDVKQNPQYGMDIVSPVQL 379


>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
            protein 1 protein.
          Length = 1852

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
 Frame = +1

Query: 208  PSLNTTRINSRPYVSKAPSCIHSSPTT-TNLVAEGFSILAPSVLSGMTIYAKKRPSMNPT 384
            PS     + S  Y   +PS   +SP    + V+  +S  +PS       Y+   PS +PT
Sbjct: 1577 PSSPQFSMTSPHYSPTSPSYSPTSPAAGQSPVSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1636

Query: 385  SP 390
            SP
Sbjct: 1637 SP 1638


>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.elegans
            RNA polymeraseII largest subunit (ama-1 IV) gene,
            complete cds. ).
          Length = 1859

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
 Frame = +1

Query: 208  PSLNTTRINSRPYVSKAPSCIHSSPTT-TNLVAEGFSILAPSVLSGMTIYAKKRPSMNPT 384
            PS     + S  Y   +PS   +SP    + V+  +S  +PS       Y+   PS +PT
Sbjct: 1584 PSSPQFSMTSPHYSPTSPSYSPTSPAAGQSPVSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1643

Query: 385  SP 390
            SP
Sbjct: 1644 SP 1645


>AL110500-22|CAB60434.1| 1628|Caenorhabditis elegans Hypothetical
            protein Y6B3A.1a protein.
          Length = 1628

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = +3

Query: 525  IEDHQFQPKNYWNGRWRSVWSLTVGGPATEL 617
            +E H  + K+ W   + SVW++  G P+TE+
Sbjct: 1100 VEAHSSRLKSGWQNLF-SVWTIAAGDPSTEI 1129


>AL032650-3|CAA21704.2| 1628|Caenorhabditis elegans Hypothetical
            protein Y6B3A.1a protein.
          Length = 1628

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = +3

Query: 525  IEDHQFQPKNYWNGRWRSVWSLTVGGPATEL 617
            +E H  + K+ W   + SVW++  G P+TE+
Sbjct: 1100 VEAHSSRLKSGWQNLF-SVWTIAAGDPSTEI 1129


>AF003925-1|AAB61344.1|  573|Caenorhabditis elegans mRNA capping
           enzyme protein.
          Length = 573

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 12/55 (21%), Positives = 27/55 (49%)
 Frame = +3

Query: 303 GRFFDPRSKCSFRYDHLRKEASEYEPYEPDRAAEPWRAALDEELTAYVAAHYKHG 467
           G F + R K  ++ D++    + Y+P E D+   P +   + E++  ++    +G
Sbjct: 152 GEFAENRQKGIYKQDYIDDLFARYDPTEDDKILAPEKPDWEREMSIGMSTQIDNG 206


>AC006834-9|AAL11490.1|  447|Caenorhabditis elegans Hypothetical
           protein ZK973.11 protein.
          Length = 447

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = -3

Query: 657 HPHNNELEHVEFHVTLWQARRPSKTTPNATDRSNSSWVETGDL 529
           H  NN     EFH T  +A +  +  P+  +R   +W++  DL
Sbjct: 257 HKFNNTSPIREFHKTAEEASKELRKHPDLWNRFQFAWLDGSDL 299


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,018,477
Number of Sequences: 27780
Number of extensions: 380954
Number of successful extensions: 1184
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1077
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1170
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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