Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_L04
(781 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006708-15|AAF60425.1| 504|Caenorhabditis elegans Hypothetical... 182 2e-46
AF043704-1|AAK21475.1| 487|Caenorhabditis elegans Hypothetical ... 79 3e-15
Z71181-4|CAA94897.1| 486|Caenorhabditis elegans Hypothetical pr... 70 2e-12
Z68106-5|CAA92129.1| 557|Caenorhabditis elegans Hypothetical pr... 35 0.075
Z98853-4|CAB57905.1| 301|Caenorhabditis elegans Hypothetical pr... 31 0.92
Z49937-1|CAA90184.2| 670|Caenorhabditis elegans Hypothetical pr... 29 2.8
AF045644-2|AAC02600.1| 454|Caenorhabditis elegans Hypothetical ... 29 2.8
AF047658-3|ABC71828.1| 315|Caenorhabditis elegans Hypothetical ... 29 3.7
Z54284-4|CAA91061.1| 1001|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z50742-5|CAA90618.2| 650|Caenorhabditis elegans Hypothetical pr... 29 4.9
AL132862-11|CAB60541.1| 396|Caenorhabditis elegans Hypothetical... 29 4.9
AL031621-5|CAA20930.1| 437|Caenorhabditis elegans Hypothetical ... 28 6.5
Z71258-12|CAJ30220.1| 555|Caenorhabditis elegans Hypothetical p... 28 8.6
Z71258-11|CAJ30219.1| 361|Caenorhabditis elegans Hypothetical p... 28 8.6
Z71258-10|CAJ30218.1| 439|Caenorhabditis elegans Hypothetical p... 28 8.6
Z71258-9|CAI46548.1| 437|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z71258-8|CAD30427.1| 553|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z71258-7|CAA95782.2| 588|Caenorhabditis elegans Hypothetical pr... 28 8.6
U51136-1|AAA96057.1| 553|Caenorhabditis elegans CHR3 protein. 28 8.6
U13075-1|AAA96983.1| 553|Caenorhabditis elegans steroid hormone... 28 8.6
AF332203-1|AAK17974.1| 588|Caenorhabditis elegans nuclear recep... 28 8.6
AF332202-1|AAK17973.1| 573|Caenorhabditis elegans nuclear recep... 28 8.6
>AC006708-15|AAF60425.1| 504|Caenorhabditis elegans Hypothetical
protein Y110A7A.8 protein.
Length = 504
Score = 182 bits (444), Expect = 2e-46
Identities = 91/221 (41%), Positives = 144/221 (65%)
Frame = +2
Query: 119 KEXYDFAVPYPVLPKEEEIKNVSIRELAKLRYSDRLKRVMSEIECNAGNNRNKVEVAGLM 298
KE D + + K S+ ++AKL SD ++ ++E +++V+V +
Sbjct: 34 KEELDDDIEEATEEPMDTTKYASVHDVAKLARSDEYLALVKQLEVELKRPQDEVKVTAPL 93
Query: 299 ESDPEYQLIVEANNVAVEIDGEIAIIHRFVRDKYQKRFPELESLIITPLEYIRTVKELGN 478
E+DP+Y+LIV+ ++VA +ID EI +IH+FVRDKY+KRFPELE+L+ L Y+ TV+ LGN
Sbjct: 94 EADPQYKLIVKLSHVAADIDNEINVIHKFVRDKYEKRFPELETLVPNALTYLATVQLLGN 153
Query: 479 DLDRAKNNEILQSFLTQATIMIVSVTASTTQGKLLSQIELEEINEACDMASELNNFKSQI 658
+++ E L L +T M+VSVT STTQG L ELE + +AC++A++L+ + ++
Sbjct: 154 EINSKVVKEQLGGILDASTCMVVSVTVSTTQGVKLEPNELETVMDACNLAAQLHVNRLEM 213
Query: 659 YEYVESRMTFIAPNITAIVGASTAAKILGVAGGLSKLSXMP 781
++ VE RM IAPN+ A++G++T A ++ AGGLS L+ MP
Sbjct: 214 HQLVEWRMALIAPNLVALLGSTTTAHLVSQAGGLSPLATMP 254
>AF043704-1|AAK21475.1| 487|Caenorhabditis elegans Hypothetical
protein W01B11.3 protein.
Length = 487
Score = 79.4 bits (187), Expect = 3e-15
Identities = 47/154 (30%), Positives = 82/154 (53%)
Frame = +2
Query: 320 LIVEANNVAVEIDGEIAIIHRFVRDKYQKRFPELESLIITPLEYIRTVKELGNDLDRAKN 499
+IV+A ++ ++D E+ VR+ Y FPEL I Y + +K +G + +
Sbjct: 159 MIVQAVSLLDDLDKELNNYVMRVREWYGWHFPELGKTIQDHQAYAKIIKAIG--MRQNCI 216
Query: 500 NEILQSFLTQATIMIVSVTASTTQGKLLSQIELEEINEACDMASELNNFKSQIYEYVESR 679
N L S L + V A + G +S I+L I CD EL+ +++Q+++Y+++R
Sbjct: 217 NTDLSSILPEELEEKVKEDAEISMGTDISDIDLIHIKGLCDQVIELSAYRAQLFDYLKNR 276
Query: 680 MTFIAPNITAIVGASTAAKILGVAGGLSKLSXMP 781
MT +APN+T ++G A+++ AG L L+ P
Sbjct: 277 MTALAPNLTVLLGELVGARLISHAGSLVSLAKAP 310
>Z71181-4|CAA94897.1| 486|Caenorhabditis elegans Hypothetical
protein K07C5.4 protein.
Length = 486
Score = 70.1 bits (164), Expect = 2e-12
Identities = 42/160 (26%), Positives = 83/160 (51%), Gaps = 6/160 (3%)
Frame = +2
Query: 320 LIVEANNVAVEIDGEIAIIHRFVRDKYQKRFPELESLIITPLEYIRTVKELGNDLDRAKN 499
+++++ + ++D +I + +R+ Y +PEL L +Y R + + A+N
Sbjct: 170 MVIQSIALLDQLDKDINLFGMRIREWYSYHYPELFRLAPDQYKYSRLAVAILDRNKMAEN 229
Query: 500 ----NEILQSFL--TQATIMIVSVTASTTQGKLLSQIELEEINEACDMASELNNFKSQIY 661
NEIL+ ++ T I+ A T+ G +S ++LE I S L ++ Q++
Sbjct: 230 ENLENEILEILDNDSEKTAQIIEA-ARTSMGMDISDLDLENIKRFAARVSSLMEYRQQLH 288
Query: 662 EYVESRMTFIAPNITAIVGASTAAKILGVAGGLSKLSXMP 781
EY++ RM AP+++A++G A+++ AG L+ L+ P
Sbjct: 289 EYIKDRMDHCAPSLSALIGEQVGARLISHAGSLTNLAKYP 328
>Z68106-5|CAA92129.1| 557|Caenorhabditis elegans Hypothetical
protein F41E7.6 protein.
Length = 557
Score = 34.7 bits (76), Expect = 0.075
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +2
Query: 419 LESLI-ITPLEYIRTVKELGNDLDRAKNNEILQSFLTQATI 538
L+SL+ I P + + T+ L ND ++N +ILQ FL + TI
Sbjct: 28 LKSLVPIVPKDELETITTLANDFASSQNGQILQRFLKEKTI 68
>Z98853-4|CAB57905.1| 301|Caenorhabditis elegans Hypothetical
protein R08A2.4 protein.
Length = 301
Score = 31.1 bits (67), Expect = 0.92
Identities = 18/56 (32%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Frame = +2
Query: 311 EYQ-LIVEANNVAVEIDGEIAIIHRFVRD-KYQKRFPELESLIITPLEYIRTVKEL 472
+YQ +++ ++ E DG+I I V K ++RF ++E++ I+ LEY++ V+ L
Sbjct: 107 KYQRALLQRFSINFESDGDIKIFEELVHILKAKRRFLQVETIDISLLEYLQAVQVL 162
>Z49937-1|CAA90184.2| 670|Caenorhabditis elegans Hypothetical
protein F14F3.2 protein.
Length = 670
Score = 29.5 bits (63), Expect = 2.8
Identities = 28/118 (23%), Positives = 54/118 (45%), Gaps = 6/118 (5%)
Frame = +2
Query: 380 RFVRDKYQKRFPELESLIITPLEYIRTVKELGNDLDRAKN---NEILQ--SFLTQATIMI 544
R ++ + E+ + +P+ I N LD + + +E+L+ L+ M+
Sbjct: 377 RIMKKSEYADYDEVAGISCSPISGI-VPNSQANTLDESSSRVWDELLEMKERLSSTETMV 435
Query: 545 VSVTASTTQ-GKLLSQIELEEINEACDMASELNNFKSQIYEYVESRMTFIAPNITAIV 715
V++T + KL+ ++ + IN + SEL F+ +Y + MT P+ AIV
Sbjct: 436 VTLTKQNEELTKLVHSLQAQNIN----LNSELITFRDDLYNLKRTNMTRRMPSPLAIV 489
>AF045644-2|AAC02600.1| 454|Caenorhabditis elegans Hypothetical
protein F57H12.4 protein.
Length = 454
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = -1
Query: 394 VTDKSVNNSYFTINFNSNIICFHNQLILRVRLH*ASNFNLISVISSITFYFTHNTFQTI 218
+ +K + NS+ I +++ +Q I+ V L S F+++ + SSI Y + + TI
Sbjct: 59 ILEKRIYNSFLKIRLLNSVFLLKHQTIMMVLLCGLSLFDVVLLTSSIMIYPSMHQCSTI 117
>AF047658-3|ABC71828.1| 315|Caenorhabditis elegans Hypothetical
protein K03H6.4 protein.
Length = 315
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/68 (25%), Positives = 31/68 (45%)
Frame = -1
Query: 529 LSKKTL*YFIILSPVQIIAKFFHCPYVFQWSDD*RFQFRKPFLIFVTDKSVNNSYFTINF 350
L+ T+ +I+L +I P +F RF++RK FL+F S++ Y +
Sbjct: 4 LTDYTMITYIVLG---LIILLVDVPLIFNLLSQKRFRYRKDFLLFACASSIDMFYVVVTI 60
Query: 349 NSNIICFH 326
++ H
Sbjct: 61 WNSACRLH 68
>Z54284-4|CAA91061.1| 1001|Caenorhabditis elegans Hypothetical
protein D2085.4 protein.
Length = 1001
Score = 28.7 bits (61), Expect = 4.9
Identities = 24/93 (25%), Positives = 43/93 (46%)
Frame = +2
Query: 464 KELGNDLDRAKNNEILQSFLTQATIMIVSVTASTTQGKLLSQIELEEINEACDMASELNN 643
K G ++RA N + LT+ V+ + ST+ ++ L+ I C ++LN
Sbjct: 175 KPTGKTVERASLNPRILQLLTRIFETFVNPSRSTSVSVNVANRLLKTI---CVNITDLN- 230
Query: 644 FKSQIYEYVESRMTFIAPNITAIVGASTAAKIL 742
F + I Y++ + +PN T + A + IL
Sbjct: 231 FSNYILYYIKDHIKPTSPNFTNLFEAMKSVDIL 263
>Z50742-5|CAA90618.2| 650|Caenorhabditis elegans Hypothetical
protein K09A11.5 protein.
Length = 650
Score = 28.7 bits (61), Expect = 4.9
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = -1
Query: 730 CC*CSNNGSYVWCNKSHSTFNI 665
CC C+ G +WC+ ++F+I
Sbjct: 53 CCICARRGEVLWCHSCPASFHI 74
>AL132862-11|CAB60541.1| 396|Caenorhabditis elegans Hypothetical
protein Y73F8A.16 protein.
Length = 396
Score = 28.7 bits (61), Expect = 4.9
Identities = 25/113 (22%), Positives = 52/113 (46%), Gaps = 8/113 (7%)
Frame = +2
Query: 203 KLRYSDRLKRVMSEIECNAGNNRNKVEVA--GLMESDPEYQLIVEANNVAVEIDGEIAI- 373
+L ++ K S E + ++N+ E+A +++ + + E+ N + EI+
Sbjct: 190 RLDGGNKRKNTDSSEERTSKRSKNETEIAVSDILQVASQSENYNESTNSG-RLQNEISSS 248
Query: 374 IHRFVRDKYQKRFPELESLIITPLEYIR----TVKELGNDLD-RAKNNEILQS 517
IH+F YQ ++P + TP Y++ E+ N D + K N + ++
Sbjct: 249 IHQFPSTSYQNQYPHAYPTVNTPPIYVQQFTALFDEIHNQFDPKTKQNRVAKN 301
>AL031621-5|CAA20930.1| 437|Caenorhabditis elegans Hypothetical
protein F28H6.3 protein.
Length = 437
Score = 28.3 bits (60), Expect = 6.5
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Frame = +2
Query: 410 FPELESLIITPLEYIRTVKELGNDLDRAKNN-EILQSFLTQATIMIVSVTASTTQGKLLS 586
FP+++ TP+ + +KE + + E L+ + + T MIV GKL S
Sbjct: 134 FPQVKFAGGTPISVVMKLKEGSKSASQFTIDFEELEKKINKRTKMIVINNPHNPTGKLFS 193
Query: 587 QIELEEINEACDMASELNNFKSQIYEY 667
+ EL+ I E +L ++YE+
Sbjct: 194 REELQHIAELA-RNYDLIVVADEVYEF 219
>Z71258-12|CAJ30220.1| 555|Caenorhabditis elegans Hypothetical
protein C01H6.5f protein.
Length = 555
Score = 27.9 bits (59), Expect = 8.6
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +2
Query: 155 LPKEEEIKNV--SIRELAKLRYSDRLKRVMSEIECNAGNNRNKVEVAGLM-ESDPEYQLI 325
LP+E +I+ + S+ EL+ L ++ V ++ C R V A L+ E D E QLI
Sbjct: 381 LPQETQIQLLKGSVFELS-LVFAAMYYNVDAQAVCG---ERYSVPFACLIAEDDAEMQLI 436
Query: 326 VEANNVAVEI 355
VE NN EI
Sbjct: 437 VEVNNTLQEI 446
>Z71258-11|CAJ30219.1| 361|Caenorhabditis elegans Hypothetical
protein C01H6.5e protein.
Length = 361
Score = 27.9 bits (59), Expect = 8.6
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +2
Query: 155 LPKEEEIKNV--SIRELAKLRYSDRLKRVMSEIECNAGNNRNKVEVAGLM-ESDPEYQLI 325
LP+E +I+ + S+ EL+ L ++ V ++ C R V A L+ E D E QLI
Sbjct: 187 LPQETQIQLLKGSVFELS-LVFAAMYYNVDAQAVCG---ERYSVPFACLIAEDDAEMQLI 242
Query: 326 VEANNVAVEI 355
VE NN EI
Sbjct: 243 VEVNNTLQEI 252
>Z71258-10|CAJ30218.1| 439|Caenorhabditis elegans Hypothetical
protein C01H6.5d protein.
Length = 439
Score = 27.9 bits (59), Expect = 8.6
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +2
Query: 155 LPKEEEIKNV--SIRELAKLRYSDRLKRVMSEIECNAGNNRNKVEVAGLM-ESDPEYQLI 325
LP+E +I+ + S+ EL+ L ++ V ++ C R V A L+ E D E QLI
Sbjct: 265 LPQETQIQLLKGSVFELS-LVFAAMYYNVDAQAVCG---ERYSVPFACLIAEDDAEMQLI 320
Query: 326 VEANNVAVEI 355
VE NN EI
Sbjct: 321 VEVNNTLQEI 330
>Z71258-9|CAI46548.1| 437|Caenorhabditis elegans Hypothetical
protein C01H6.5c protein.
Length = 437
Score = 27.9 bits (59), Expect = 8.6
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +2
Query: 155 LPKEEEIKNV--SIRELAKLRYSDRLKRVMSEIECNAGNNRNKVEVAGLM-ESDPEYQLI 325
LP+E +I+ + S+ EL+ L ++ V ++ C R V A L+ E D E QLI
Sbjct: 263 LPQETQIQLLKGSVFELS-LVFAAMYYNVDAQAVCG---ERYSVPFACLIAEDDAEMQLI 318
Query: 326 VEANNVAVEI 355
VE NN EI
Sbjct: 319 VEVNNTLQEI 328
>Z71258-8|CAD30427.1| 553|Caenorhabditis elegans Hypothetical
protein C01H6.5b protein.
Length = 553
Score = 27.9 bits (59), Expect = 8.6
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +2
Query: 155 LPKEEEIKNV--SIRELAKLRYSDRLKRVMSEIECNAGNNRNKVEVAGLM-ESDPEYQLI 325
LP+E +I+ + S+ EL+ L ++ V ++ C R V A L+ E D E QLI
Sbjct: 379 LPQETQIQLLKGSVFELS-LVFAAMYYNVDAQAVCG---ERYSVPFACLIAEDDAEMQLI 434
Query: 326 VEANNVAVEI 355
VE NN EI
Sbjct: 435 VEVNNTLQEI 444
>Z71258-7|CAA95782.2| 588|Caenorhabditis elegans Hypothetical
protein C01H6.5a protein.
Length = 588
Score = 27.9 bits (59), Expect = 8.6
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +2
Query: 155 LPKEEEIKNV--SIRELAKLRYSDRLKRVMSEIECNAGNNRNKVEVAGLM-ESDPEYQLI 325
LP+E +I+ + S+ EL+ L ++ V ++ C R V A L+ E D E QLI
Sbjct: 414 LPQETQIQLLKGSVFELS-LVFAAMYYNVDAQAVCG---ERYSVPFACLIAEDDAEMQLI 469
Query: 326 VEANNVAVEI 355
VE NN EI
Sbjct: 470 VEVNNTLQEI 479
>U51136-1|AAA96057.1| 553|Caenorhabditis elegans CHR3 protein.
Length = 553
Score = 27.9 bits (59), Expect = 8.6
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +2
Query: 155 LPKEEEIKNV--SIRELAKLRYSDRLKRVMSEIECNAGNNRNKVEVAGLM-ESDPEYQLI 325
LP+E +I+ + S+ EL+ L ++ V ++ C R V A L+ E D E QLI
Sbjct: 379 LPQETQIQLLKGSVFELS-LVFAAMYYNVDAQAVCG---ERYSVPFACLIAEDDAEMQLI 434
Query: 326 VEANNVAVEI 355
VE NN EI
Sbjct: 435 VEVNNTLQEI 444
>U13075-1|AAA96983.1| 553|Caenorhabditis elegans steroid hormone
receptor familymember CHR3 protein.
Length = 553
Score = 27.9 bits (59), Expect = 8.6
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +2
Query: 155 LPKEEEIKNV--SIRELAKLRYSDRLKRVMSEIECNAGNNRNKVEVAGLM-ESDPEYQLI 325
LP+E +I+ + S+ EL+ L ++ V ++ C R V A L+ E D E QLI
Sbjct: 379 LPQETQIQLLKGSVFELS-LVFAAMYYNVDAQAVCG---ERYSVPFACLIAEDDAEMQLI 434
Query: 326 VEANNVAVEI 355
VE NN EI
Sbjct: 435 VEVNNTLQEI 444
>AF332203-1|AAK17974.1| 588|Caenorhabditis elegans nuclear receptor
NHR-23 protein.
Length = 588
Score = 27.9 bits (59), Expect = 8.6
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +2
Query: 155 LPKEEEIKNV--SIRELAKLRYSDRLKRVMSEIECNAGNNRNKVEVAGLM-ESDPEYQLI 325
LP+E +I+ + S+ EL+ L ++ V ++ C R V A L+ E D E QLI
Sbjct: 414 LPQETQIQLLKGSVFELS-LVFAAMYYNVDAQAVCG---ERYSVPFACLIAEDDAEMQLI 469
Query: 326 VEANNVAVEI 355
VE NN EI
Sbjct: 470 VEVNNTLQEI 479
>AF332202-1|AAK17973.1| 573|Caenorhabditis elegans nuclear receptor
NHR-23 protein.
Length = 573
Score = 27.9 bits (59), Expect = 8.6
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +2
Query: 155 LPKEEEIKNV--SIRELAKLRYSDRLKRVMSEIECNAGNNRNKVEVAGLM-ESDPEYQLI 325
LP+E +I+ + S+ EL+ L ++ V ++ C R V A L+ E D E QLI
Sbjct: 399 LPQETQIQLLKGSVFELS-LVFAAMYYNVDAQAVCG---ERYSVPFACLIAEDDAEMQLI 454
Query: 326 VEANNVAVEI 355
VE NN EI
Sbjct: 455 VEVNNTLQEI 464
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,065,175
Number of Sequences: 27780
Number of extensions: 244598
Number of successful extensions: 844
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 844
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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