Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_L02
         (864 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0854 + 25400855-25403741,25406174-25407708                       29   4.8  
07_01_0387 + 2902957-2904705                                           28   8.4  

>06_03_0854 + 25400855-25403741,25406174-25407708
          Length = 1473

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 20/59 (33%), Positives = 28/59 (47%)
 Frame = +1

Query: 313  GKPSSPGITPYTKPTKIPGSVSTAKIKVETCPIPYIKIQDNAVLLPRFTAVAARSADEP 489
            G PS    TP T+P  +P S S     + T P+    +Q N V+ P  + +AA  A  P
Sbjct: 1370 GTPSPSAPTPATEPALVPASASA----LATAPL----MQPNVVISPVPSTLAASGAAAP 1420


>07_01_0387 + 2902957-2904705
          Length = 582

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +1

Query: 319 PSSPGITPYTKPTKIPGSVSTAKIKVET 402
           PS+PG+ P  KP   P  V  A   V T
Sbjct: 6   PSAPGLAPVAKPPPPPSKVKVATATVPT 33


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,047,883
Number of Sequences: 37544
Number of extensions: 313316
Number of successful extensions: 721
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 721
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)