Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_K24
(496 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36241 Cluster: 60S ribosomal protein L19; n=141; Eukar... 186 2e-46
UniRef50_Q95L19 Cluster: Ribosomal protein L19; n=4; Eukaryota|R... 167 9e-41
UniRef50_P84098 Cluster: 60S ribosomal protein L19; n=53; Eukary... 167 9e-41
UniRef50_Q5DEB4 Cluster: Ribosomal protein L19; n=6; Eukaryota|R... 149 3e-35
UniRef50_Q4QJ39 Cluster: 60S ribosomal protein L19, putative; n=... 132 5e-30
UniRef50_Q014R4 Cluster: Ribosomal protein L19; n=2; Eukaryota|R... 129 4e-29
UniRef50_UPI0000DA4672 Cluster: PREDICTED: similar to ribosomal ... 111 8e-24
UniRef50_Q98RT9 Cluster: 60S ribosomal protein L19; n=1; Guillar... 105 4e-22
UniRef50_Q7QT85 Cluster: Ribosomal protein L19; n=1; Giardia lam... 105 7e-22
UniRef50_Q6QI82 Cluster: LRRGT00126; n=3; Rattus norvegicus|Rep:... 98 8e-20
UniRef50_Q8SRP5 Cluster: 60S RIBOSOMAL PROTEIN L19; n=1; Encepha... 89 4e-17
UniRef50_Q9V1V3 Cluster: 50S ribosomal protein L19e; n=6; Archae... 87 2e-16
UniRef50_P54043 Cluster: 50S ribosomal protein L19e; n=12; Eurya... 77 3e-13
UniRef50_Q74N10 Cluster: Ribosomal protein L19; n=3; Archaea|Rep... 73 5e-12
UniRef50_UPI0001552F33 Cluster: PREDICTED: hypothetical protein;... 55 5e-10
UniRef50_Q7QT86 Cluster: GLP_72_19704_20255; n=1; Giardia lambli... 65 9e-10
UniRef50_Q673R0 Cluster: Ribosomal protein L19; n=2; environment... 60 4e-08
UniRef50_Q9YF93 Cluster: 50S ribosomal protein L19e; n=2; Desulf... 59 5e-08
UniRef50_Q6QI84 Cluster: LRRG00124; n=5; Eukaryota|Rep: LRRG0012... 56 3e-07
UniRef50_A3H8Q7 Cluster: Ribosomal protein L19e; n=1; Caldivirga... 55 8e-07
UniRef50_Q6L1A9 Cluster: Large subunit ribosomal protein L19E; n... 55 1e-06
UniRef50_Q680Q9 Cluster: Ribosomal protein L19; n=3; Arabidopsis... 54 2e-06
UniRef50_UPI00005A22A8 Cluster: PREDICTED: similar to ribosomal ... 53 4e-06
UniRef50_Q8ZVV8 Cluster: Ribosomal protein L19; n=4; Pyrobaculum... 50 2e-05
UniRef50_Q6QI77 Cluster: LRRG00131; n=1; Rattus norvegicus|Rep: ... 49 5e-05
UniRef50_Q9UX89 Cluster: 50S ribosomal protein L19e; n=4; Sulfol... 47 3e-04
UniRef50_Q6X9Y8 Cluster: Ribosomal protein L19; n=1; Equus cabal... 44 0.001
UniRef50_A0RUF8 Cluster: Ribosomal protein L19E; n=1; Cenarchaeu... 41 0.018
UniRef50_Q3LVV0 Cluster: Ribosomal protein L19; n=1; Bigelowiell... 40 0.031
UniRef50_A7DRM7 Cluster: Ribosomal protein L19e; n=1; Candidatus... 40 0.031
UniRef50_A2YPT1 Cluster: Putative uncharacterized protein; n=3; ... 33 3.5
UniRef50_Q2HGL4 Cluster: Putative uncharacterized protein; n=1; ... 33 3.5
UniRef50_Q8DFA7 Cluster: Flagellar motor protein MotB; n=31; Gam... 33 4.6
UniRef50_A6RYJ9 Cluster: Predicted protein; n=1; Botryotinia fuc... 33 4.6
UniRef50_Q4QEU8 Cluster: Putative uncharacterized protein; n=3; ... 32 6.1
UniRef50_Q6ZUA0 Cluster: CDNA FLJ43879 fis, clone TESTI4008993; ... 32 8.1
>UniRef50_P36241 Cluster: 60S ribosomal protein L19; n=141;
Eukaryota|Rep: 60S ribosomal protein L19 - Drosophila
melanogaster (Fruit fly)
Length = 203
Score = 186 bits (454), Expect = 2e-46
Identities = 93/143 (65%), Positives = 103/143 (72%), Gaps = 5/143 (3%)
Frame = +2
Query: 5 RCG----WLQMQSMRSQTPTPV-QHIRKLLKAGLVIKQPVAVHSRARVRKNTEARRKGRH 169
RCG WL + T Q+IRKL+K GL+IK+PV VHSR RVRKNTEARRKGRH
Sbjct: 16 RCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSRYRVRKNTEARRKGRH 75
Query: 170 CGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNK 349
CGFGKR+GTANARMP K LW +KKIDRHLYH LYMK KGNVFKNK
Sbjct: 76 CGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLYHDLYMKCKGNVFKNK 135
Query: 350 RVLMEYIHRKKAEKARTKMLSDQ 418
RVLMEYIH+KKAEK R+KML+DQ
Sbjct: 136 RVLMEYIHKKKAEKQRSKMLADQ 158
>UniRef50_Q95L19 Cluster: Ribosomal protein L19; n=4; Eukaryota|Rep:
Ribosomal protein L19 - Sus scrofa (Pig)
Length = 153
Score = 167 bits (407), Expect = 9e-41
Identities = 77/120 (64%), Positives = 92/120 (76%)
Frame = +2
Query: 59 QHIRKLLKAGLVIKQPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXX 238
Q IRKL+K GL+I++PV VHSRAR RKNT ARRKGRH G GKR+GTANARMP+K W
Sbjct: 31 QQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRR 90
Query: 239 XXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 418
+KKIDRH+YHSLY+K KGNVFKNKR+LME+IH+ KA+KAR K+L+DQ
Sbjct: 91 MRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 150
>UniRef50_P84098 Cluster: 60S ribosomal protein L19; n=53;
Eukaryota|Rep: 60S ribosomal protein L19 - Homo sapiens
(Human)
Length = 196
Score = 167 bits (407), Expect = 9e-41
Identities = 77/120 (64%), Positives = 92/120 (76%)
Frame = +2
Query: 59 QHIRKLLKAGLVIKQPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXX 238
Q IRKL+K GL+I++PV VHSRAR RKNT ARRKGRH G GKR+GTANARMP+K W
Sbjct: 39 QQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRR 98
Query: 239 XXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 418
+KKIDRH+YHSLY+K KGNVFKNKR+LME+IH+ KA+KAR K+L+DQ
Sbjct: 99 MRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>UniRef50_Q5DEB4 Cluster: Ribosomal protein L19; n=6; Eukaryota|Rep:
Ribosomal protein L19 - Schistosoma japonicum (Blood
fluke)
Length = 287
Score = 149 bits (361), Expect = 3e-35
Identities = 71/118 (60%), Positives = 84/118 (71%)
Frame = +2
Query: 65 IRKLLKAGLVIKQPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXX 244
IRKL K L+I++PV VHSR+R RKN ARRKGRH G GKR+GTA+ARMPQK LW
Sbjct: 41 IRKLYKDNLIIRKPVTVHSRSRCRKNLIARRKGRHTGTGKRKGTADARMPQKVLWMRRMR 100
Query: 245 XXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 418
A KID+HLYH LY + KGN FKNKRVL+++IH+KKAE+ R K LSDQ
Sbjct: 101 VLRRLLKRYREAHKIDKHLYHLLYQQCKGNQFKNKRVLIDHIHKKKAERLRAKQLSDQ 158
>UniRef50_Q4QJ39 Cluster: 60S ribosomal protein L19, putative; n=16;
cellular organisms|Rep: 60S ribosomal protein L19,
putative - Leishmania major
Length = 267
Score = 132 bits (318), Expect = 5e-30
Identities = 64/136 (47%), Positives = 86/136 (63%), Gaps = 1/136 (0%)
Frame = +2
Query: 14 WLQM-QSMRSQTPTPVQHIRKLLKAGLVIKQPVAVHSRARVRKNTEARRKGRHCGFGKRR 190
WL +++ Q + +RKL+K G +I++PV VHSRAR RK EA+ GRH G G+R
Sbjct: 43 WLDPNEAVEIQNANSRKSVRKLIKDGFIIRKPVKVHSRARWRKMKEAKDMGRHNGVGRRE 102
Query: 191 GTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYI 370
G+ ARMP KELW KKIDRH+Y LYM+AKGNVF+NKR L+E+I
Sbjct: 103 GSREARMPSKELWMRRLRILRRLLRKYRADKKIDRHVYRDLYMRAKGNVFRNKRNLVEHI 162
Query: 371 HRKKAEKARTKMLSDQ 418
H+ K EK + + L++Q
Sbjct: 163 HKIKNEKKKERQLAEQ 178
>UniRef50_Q014R4 Cluster: Ribosomal protein L19; n=2; Eukaryota|Rep:
Ribosomal protein L19 - Ostreococcus tauri
Length = 213
Score = 129 bits (311), Expect = 4e-29
Identities = 59/102 (57%), Positives = 70/102 (68%)
Frame = +2
Query: 113 VHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKID 292
+HSRAR + A+R GRH G+GKRRGT AR+P K LW AKKID
Sbjct: 77 IHSRARTAREQAAKRLGRHTGYGKRRGTREARLPTKVLWLRRHRVLRRLLSKYRDAKKID 136
Query: 293 RHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 418
+H+YHS+Y+K KGNVFKNKRVLME IH+ KAEKAR K L+DQ
Sbjct: 137 KHMYHSMYLKCKGNVFKNKRVLMEAIHKSKAEKAREKSLADQ 178
>UniRef50_UPI0000DA4672 Cluster: PREDICTED: similar to ribosomal
protein L19; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L19 - Rattus norvegicus
Length = 303
Score = 111 bits (267), Expect = 8e-24
Identities = 57/120 (47%), Positives = 76/120 (63%)
Frame = +2
Query: 59 QHIRKLLKAGLVIKQPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXX 238
Q IRKL++ GL+I +PV VHS+A KNT KGRH GK +GTAN +P++ W
Sbjct: 39 QLIRKLIEDGLIIWKPVTVHSQAHCEKNT---LKGRHMVIGKGKGTANIWVPERVTWMRR 95
Query: 239 XXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 418
+KKID H+ HSLY++ K NVFKN+ +LME IH+ KA+KA K+L+DQ
Sbjct: 96 MSILHRLLRRYCESKKIDCHMCHSLYLRVKRNVFKNQWILMEQIHKPKADKACKKLLADQ 155
>UniRef50_Q98RT9 Cluster: 60S ribosomal protein L19; n=1; Guillardia
theta|Rep: 60S ribosomal protein L19 - Guillardia theta
(Cryptomonas phi)
Length = 190
Score = 105 bits (253), Expect = 4e-22
Identities = 49/118 (41%), Positives = 72/118 (61%)
Frame = +2
Query: 65 IRKLLKAGLVIKQPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXX 244
IRKL++ G ++K+ HSR R+R E + GRH G GKR+G+ N+R K +W
Sbjct: 41 IRKLIRDGFILKKKDKNHSRNRIRSRKEEIKLGRHEGLGKRKGSKNSRYSIKLIWIIRIR 100
Query: 245 XXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 418
+ K++RHLY SLY+K+KGNVFKNK++L E+IH+ K E+ R + D+
Sbjct: 101 VMRNLLKRLRNSSKLNRHLYRSLYLKSKGNVFKNKKILTEFIHKAKNEQKRKEEFLDK 158
>UniRef50_Q7QT85 Cluster: Ribosomal protein L19; n=1; Giardia
lamblia ATCC 50803|Rep: Ribosomal protein L19 - Giardia
lamblia ATCC 50803
Length = 196
Score = 105 bits (251), Expect = 7e-22
Identities = 52/118 (44%), Positives = 69/118 (58%)
Frame = +2
Query: 65 IRKLLKAGLVIKQPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXX 244
IR L+++ ++ K + SR R+R A+R GRH G GKRRGT ARMP K LW
Sbjct: 41 IRSLIESKIIAKLDIKGSSRGRIRARHAAKRLGRHSGHGKRRGTREARMPSKTLWIQRQR 100
Query: 245 XXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 418
+KIDRHLY +LY KAKGN+FKNKRVL+E+I + E+ K ++
Sbjct: 101 VLRRLLSRYRDDEKIDRHLYETLYAKAKGNMFKNKRVLLEHIVGMQKEQELEKKKKEE 158
>UniRef50_Q6QI82 Cluster: LRRGT00126; n=3; Rattus norvegicus|Rep:
LRRGT00126 - Rattus norvegicus (Rat)
Length = 632
Score = 98.3 bits (234), Expect = 8e-20
Identities = 48/111 (43%), Positives = 68/111 (61%)
Frame = +2
Query: 86 GLVIKQPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXX 265
GL+I++PV VHS +R+ +G+ G + GTANARM +K W
Sbjct: 503 GLIIRKPVTVHSPGSLREKHLGLMEGQAYGHREEEGTANARMSEKLTWMRRMRILHRLLR 562
Query: 266 XXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 418
+KKIDR +YHSL +K KGNVFKNK L+++IH+ KA++A K+L+DQ
Sbjct: 563 RYRESKKIDRRMYHSLDLKVKGNVFKNKWSLVDHIHKLKADRAPKKLLADQ 613
>UniRef50_Q8SRP5 Cluster: 60S RIBOSOMAL PROTEIN L19; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L19
- Encephalitozoon cuniculi
Length = 171
Score = 89.4 bits (212), Expect = 4e-17
Identities = 44/120 (36%), Positives = 71/120 (59%)
Frame = +2
Query: 59 QHIRKLLKAGLVIKQPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXX 238
+ I++L+K ++I + SR R RK EA++KGRH G GKR GTANARMPQK++W
Sbjct: 39 EQIKQLIKDNVIIMKQDKHTSRGRCRKRLEAKKKGRHMGTGKRFGTANARMPQKKIWMKK 98
Query: 239 XXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 418
+I + + Y +AKG++FK++ + + I ++KA++ R K L++Q
Sbjct: 99 IRAMRAMLKEMRANGEITKEDFRVFYKQAKGHLFKHRFHMKDCIIKRKADEQRAKELAEQ 158
>UniRef50_Q9V1V3 Cluster: 50S ribosomal protein L19e; n=6;
Archaea|Rep: 50S ribosomal protein L19e - Pyrococcus
abyssi
Length = 151
Score = 87.4 bits (207), Expect = 2e-16
Identities = 45/113 (39%), Positives = 60/113 (53%)
Frame = +2
Query: 59 QHIRKLLKAGLVIKQPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXX 238
+ IR+L+K G++ K+PV SR R R E ++KGRH G G R+G ARM +KELW
Sbjct: 39 EDIRRLIKEGVIKKKPVKGQSRYRARIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKT 98
Query: 239 XXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKAR 397
KKIDR Y LY++AKG FK+K L ++ K R
Sbjct: 99 IRALRKELRKLKEQKKIDRRTYRMLYIRAKGGQFKSKHQLYMFLEEHNLLKKR 151
>UniRef50_P54043 Cluster: 50S ribosomal protein L19e; n=12;
Euryarchaeota|Rep: 50S ribosomal protein L19e -
Methanococcus jannaschii
Length = 151
Score = 76.6 bits (180), Expect = 3e-13
Identities = 42/109 (38%), Positives = 55/109 (50%)
Frame = +2
Query: 65 IRKLLKAGLVIKQPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXX 244
IR L+K G++ K+ S ARV+K E R+KGR G G RRG A AR P KE W
Sbjct: 43 IRALIKEGVIKKKQKKGISSARVKKLKEQRKKGRRRGPGSRRGAAGARTPPKERWMATIR 102
Query: 245 XXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEK 391
+ KIDR +Y LY AKG F+++ L Y+ + K
Sbjct: 103 ALRKTLKQLRDSGKIDRKVYRKLYRMAKGGAFRSRSHLFLYMREHELLK 151
>UniRef50_Q74N10 Cluster: Ribosomal protein L19; n=3; Archaea|Rep:
Ribosomal protein L19 - Nanoarchaeum equitans
Length = 147
Score = 72.5 bits (170), Expect = 5e-12
Identities = 38/105 (36%), Positives = 53/105 (50%)
Frame = +2
Query: 65 IRKLLKAGLVIKQPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXX 244
IR+L+K G++ K P+ SR R R+ E ++KGR G G R+G AR K W
Sbjct: 40 IRELIKRGIIKKLPIEGQSRKRARELHEKKKKGRRRGPGSRKGKRTARADPKRQWINKVR 99
Query: 245 XXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRK 379
K ID Y LY K KGN+FK++ L+ Y+ +K
Sbjct: 100 AQRKLLKELKEKKIIDNKTYWDLYKKVKGNLFKSRSHLLLYLKQK 144
>UniRef50_UPI0001552F33 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 183
Score = 55.2 bits (127), Expect(2) = 5e-10
Identities = 26/46 (56%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Frame = +2
Query: 287 IDRHLYHSLYMKAKGNVFK--NKRVLMEYIHRKKAEKARTKMLSDQ 418
ID HLY SLY+K KGNV K +KR+ E+I + KA+ A+ K+LSDQ
Sbjct: 108 IDYHLYRSLYLKVKGNVLKTIDKRIFKEHIRKLKADSAQQKLLSDQ 153
Score = 30.7 bits (66), Expect(2) = 5e-10
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Frame = +2
Query: 5 RCG----WLQ-MQSMRSQTPTPVQHIRKLLKAGLVIKQPVAVHSRARVRKNTEARRKGRH 169
RCG WL ++ + Q IRKL + GL+I++ T ARR+G H
Sbjct: 50 RCGKRKVWLDPSETSEIDNASSCQQIRKLSEDGLIIQKSA-----------TLARRRGWH 98
Query: 170 CGFGKRRGT 196
G KR+GT
Sbjct: 99 MGIRKRKGT 107
>UniRef50_Q7QT86 Cluster: GLP_72_19704_20255; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_72_19704_20255 - Giardia lamblia
ATCC 50803
Length = 183
Score = 64.9 bits (151), Expect = 9e-10
Identities = 41/105 (39%), Positives = 61/105 (58%)
Frame = -1
Query: 481 GGNTFLAALACLLYFIAAGLSLVAKHLRPGLLSLLPVDVLHEHTLVLEHITLRLHVE*VV 302
GGN + LA LL +AA L L+ L LL L DVL E+ L+LEH+TL L +E ++
Sbjct: 52 GGNLLCSLLASLLCLLAALLKLLLLLLLELLLLLHSNDVLQENALILEHVTLSLSIEGLI 111
Query: 301 *MPVNLLGSSVLQEQFS*NPLSLYP*FLLWHTRIGSTSSLTKATV 167
+P++L +V +Q + + L+L P L HT + T++LT V
Sbjct: 112 KVPIDLFVVTVPAQQATEDTLALNPESLRRHTSLPGTAALTVTAV 156
>UniRef50_Q673R0 Cluster: Ribosomal protein L19; n=2; environmental
samples|Rep: Ribosomal protein L19 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 158
Score = 59.7 bits (138), Expect = 4e-08
Identities = 30/96 (31%), Positives = 45/96 (46%)
Frame = +2
Query: 59 QHIRKLLKAGLVIKQPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXX 238
+ +R+L+ G++ +P SR+R RK + KGR G G R+G+ANAR P+K W
Sbjct: 44 EDVRRLIDEGVIKARPFVGTSRSRARKAAAQKAKGRRSGQGSRKGSANARNPRKSRWMRT 103
Query: 239 XXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKN 346
I Y Y KAKG +++
Sbjct: 104 IRAQRKELKGMREDDSISSSEYRYYYRKAKGGSYRS 139
>UniRef50_Q9YF93 Cluster: 50S ribosomal protein L19e; n=2;
Desulfurococcaceae|Rep: 50S ribosomal protein L19e -
Aeropyrum pernix
Length = 155
Score = 59.3 bits (137), Expect = 5e-08
Identities = 33/102 (32%), Positives = 47/102 (46%)
Frame = +2
Query: 65 IRKLLKAGLVIKQPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXX 244
+R L+K G++ P ++ + RRKGR G G+R+G A AR+ KE W
Sbjct: 42 VRALIKRGVIKVLPEKGNAGHASKVRHLQRRKGRRRGMGRRKGVATARLDPKERWMHRIR 101
Query: 245 XXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYI 370
+ IDR Y LYM AKG F++ L Y+
Sbjct: 102 KIRRYLRYLRDKQVIDRKTYRRLYMLAKGGTFRDLASLKRYM 143
>UniRef50_Q6QI84 Cluster: LRRG00124; n=5; Eukaryota|Rep: LRRG00124 -
Rattus norvegicus (Rat)
Length = 487
Score = 56.4 bits (130), Expect = 3e-07
Identities = 46/131 (35%), Positives = 59/131 (45%), Gaps = 2/131 (1%)
Frame = -2
Query: 429 RASAWSLSIFVLAFSAFFLWMYSMSTRLFLNTLPFAF-M*SEWYRCLSIFLAVLYFRSNF 253
+A AWS S F+ L L +PF + Y +++ L RS
Sbjct: 53 QAPAWSASSFLAGLVCLQFVDVLHENPLALEYIPFDLQIQGVIYMAVNLLRFQLSLRSRH 112
Query: 252 LRTLCLCTHSSFCGIRALAVPLLLPKPQ*RPFLRASVFLRTRAREWTATGCLMTRPAL-S 76
R L L +F GI+ALAVP L P PF R+ VF R RAREWT + L A+
Sbjct: 113 -RILILLIQVTFSGIQALAVPFLFPMLICLPFRRSKVFFRHRAREWTDSHRLPDDQAIFD 171
Query: 75 SLRMCWTGVGV 43
L TGVG+
Sbjct: 172 QLPDLLTGVGI 182
>UniRef50_A3H8Q7 Cluster: Ribosomal protein L19e; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L19e -
Caldivirga maquilingensis IC-167
Length = 158
Score = 55.2 bits (127), Expect = 8e-07
Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 1/103 (0%)
Frame = +2
Query: 65 IRKLLKAGLVIKQPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANAR-MPQKELWXXXX 241
+R L+K GL+ +P +SR R R E R+ GR G G RRGT AR KE+W
Sbjct: 37 VRSLMKEGLIEVKPRKRNSRGRWRITHEKRKSGRRRGRGSRRGTRKARGAVGKEVWVPRI 96
Query: 242 XXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYI 370
ID+ + +LY AKG F++ L Y+
Sbjct: 97 RRIRRFLNTLKHRGVIDKATWRNLYRMAKGGYFESLAHLRTYM 139
>UniRef50_Q6L1A9 Cluster: Large subunit ribosomal protein L19E; n=4;
Thermoplasmatales|Rep: Large subunit ribosomal protein
L19E - Picrophilus torridus
Length = 158
Score = 54.8 bits (126), Expect = 1e-06
Identities = 34/120 (28%), Positives = 51/120 (42%), Gaps = 1/120 (0%)
Frame = +2
Query: 14 WLQMQSM-RSQTPTPVQHIRKLLKAGLVIKQPVAVHSRARVRKNTEARRKGRHCGFGKRR 190
W+ S+ + T + +RKL+ ++ K+ +S R++K E KGR G G R
Sbjct: 22 WIDTNSIDQVLDATSREDVRKLIDLHIIQKKQKKGNSNYRLKKRIEQLAKGRRRGEGSVR 81
Query: 191 GTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYI 370
GT AR P+K W T KID+ Y Y K F ++ L +I
Sbjct: 82 GTKYARFPRKRRWISRIRALRRELRELKTNNKIDKKTYRRYYRIIKSGSFVSRAQLRNHI 141
>UniRef50_Q680Q9 Cluster: Ribosomal protein L19; n=3; Arabidopsis
thaliana|Rep: Ribosomal protein L19 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 114
Score = 54.0 bits (124), Expect = 2e-06
Identities = 37/96 (38%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Frame = +2
Query: 107 VAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKK 286
V++H +R R ARRK RH G+GK A R+ K L KK
Sbjct: 2 VSIHFHSRSR----ARRKCRHTGYGKDTMEALRRI-MKRLTRRLKMLKRLLKKFCWN-KK 55
Query: 287 IDRHLY-HSLYMKAKGNVFKNKRVLMEYIHRKKAEK 391
ID+ +Y H ++MK KG V+KNK VLME +H+ E+
Sbjct: 56 IDKLVYYHDMFMKVKGKVYKNKCVLMESMHKSSRER 91
>UniRef50_UPI00005A22A8 Cluster: PREDICTED: similar to ribosomal
protein L19; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L19 - Canis familiaris
Length = 169
Score = 52.8 bits (121), Expect = 4e-06
Identities = 24/48 (50%), Positives = 35/48 (72%)
Frame = +2
Query: 275 TAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 418
+A K+ H+ HSLY KAKG VFKNK +L+E+ ++ KA+K K+L+ Q
Sbjct: 58 SAPKVALHMCHSLYRKAKGYVFKNKWILVEHNYKLKADKVPQKLLAAQ 105
>UniRef50_Q8ZVV8 Cluster: Ribosomal protein L19; n=4;
Pyrobaculum|Rep: Ribosomal protein L19 - Pyrobaculum
aerophilum
Length = 147
Score = 50.4 bits (115), Expect = 2e-05
Identities = 31/109 (28%), Positives = 47/109 (43%)
Frame = +2
Query: 65 IRKLLKAGLVIKQPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXX 244
+R L+ GL+ +P SR R R ++KGR G G R+G R ++E W
Sbjct: 38 VRALIDQGLIWAEPERGVSRGRWRVRHIKKKKGRRRGHGSRKG---PRTDEEEAWKEKVR 94
Query: 245 XXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEK 391
K++ ++ LY KGN F++ L YI+ K K
Sbjct: 95 AMRRFLNTLKRKGKLEPRVWRQLYRMVKGNYFRDLDHLKTYINEHKLAK 143
>UniRef50_Q6QI77 Cluster: LRRG00131; n=1; Rattus norvegicus|Rep:
LRRG00131 - Rattus norvegicus (Rat)
Length = 180
Score = 49.2 bits (112), Expect = 5e-05
Identities = 34/112 (30%), Positives = 57/112 (50%)
Frame = -1
Query: 394 GLLSLLPVDVLHEHTLVLEHITLRLHVE*VV*MPVNLLGSSVLQEQFS*NPLSLYP*FLL 215
G+ LL + +L E + L + V+ V+ V LL V E+ NP +P LL
Sbjct: 43 GMDHLLVITLLAPGNAFYEKLFLHMQVQAVIRTIVTLLRFLVSPEKPVQNPHPSHPGPLL 102
Query: 214 WHTRIGSTSSLTKATVTTLSTCLCVFADTGAGVDCYRLLDDETSLEQLTDVL 59
+ +GST L A + L + VF+ G+D +++LDD+ +Q++D+L
Sbjct: 103 GYQNVGSTLPLPYAHMPALPSSQGVFSVVSPGMDGHKILDDQRIFDQISDLL 154
>UniRef50_Q9UX89 Cluster: 50S ribosomal protein L19e; n=4;
Sulfolobaceae|Rep: 50S ribosomal protein L19e -
Sulfolobus solfataricus
Length = 151
Score = 46.8 bits (106), Expect = 3e-04
Identities = 29/94 (30%), Positives = 40/94 (42%), Gaps = 1/94 (1%)
Frame = +2
Query: 65 IRKLLKAGLVIKQPVAVHSRARVRKNTEARR-KGRHCGFGKRRGTANARMPQKELWXXXX 241
IR L+K G +I S R+++ + R K G R+G AR K++W
Sbjct: 41 IRNLIKDGKIIVLKKVGISGGRLKERRKKRSLKSEGKKSGSRKGKKGARANSKQMWVKRV 100
Query: 242 XXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFK 343
K IDRH Y LY+K KG +K
Sbjct: 101 RKIRAYLKWLRDHKVIDRHTYRELYLKTKGGNYK 134
>UniRef50_Q6X9Y8 Cluster: Ribosomal protein L19; n=1; Equus
caballus|Rep: Ribosomal protein L19 - Equus caballus
(Horse)
Length = 81
Score = 44.4 bits (100), Expect = 0.001
Identities = 22/59 (37%), Positives = 31/59 (52%)
Frame = +3
Query: 315 T*RRRVMCSRTSVCSWSTSTGXXXXXXXXXXXXXXXXPAAIK*RRHASAARNVLPPXRR 491
T +RR MCS+T SW+TST PA ++ R+HASAA++ P +R
Sbjct: 1 TRKRRAMCSKTRGFSWNTSTSRRQTRLARSFWRTRLRPAGLRPRKHASAAKSGSRPRKR 59
>UniRef50_A0RUF8 Cluster: Ribosomal protein L19E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L19E - Cenarchaeum
symbiosum
Length = 150
Score = 40.7 bits (91), Expect = 0.018
Identities = 28/110 (25%), Positives = 48/110 (43%)
Frame = +2
Query: 65 IRKLLKAGLVIKQPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXX 244
IR L+ A + +PV+ SR R + + K R G ++G AR+ +K+++
Sbjct: 42 IRSLITANTIKIKPVSGTSRGRAQHKRRQKAK-RGSKAGSKQGRMGARVGKKQVYVKKVR 100
Query: 245 XXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKA 394
K I + +LY K GN +NK L + KA+++
Sbjct: 101 ALRYLLAVFKDRKDITNPEFWALYKKVGGNTVRNKAHLHLLVDEIKAKRS 150
>UniRef50_Q3LVV0 Cluster: Ribosomal protein L19; n=1; Bigelowiella
natans|Rep: Ribosomal protein L19 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 150
Score = 39.9 bits (89), Expect = 0.031
Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 4/103 (3%)
Frame = +2
Query: 74 LLKAGLVIKQPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXX 253
L K ++IK+ + S R + ++ G G G+R+GT NAR K LW
Sbjct: 43 LFKKRIIIKKTIKGVSSYRKKLRKAKKQSGLKRGIGRRKGTKNARKKYKILWIHKIRNQR 102
Query: 254 XXXXXXXTAKKIDRH--LYHSLYM--KAKGNVFKNKRVLMEYI 370
K+ + L + ++ K KGN F + + L+E++
Sbjct: 103 KLLKMFRNKKQFLNYKILLNKVFFFSKIKGNFFSSTKHLLEHM 145
>UniRef50_A7DRM7 Cluster: Ribosomal protein L19e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
L19e - Candidatus Nitrosopumilus maritimus SCM1
Length = 151
Score = 39.9 bits (89), Expect = 0.031
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 3/111 (2%)
Frame = +2
Query: 59 QHIRKLLKAGLVIKQPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXX 238
++IR L+ A + SR R + +A+R R G ++G AR+ +KE++
Sbjct: 40 ENIRSLITANTIKIDSFTGTSRGRAQTK-KAQRNKRGTKQGSKQGRKGARVGKKEIYVAK 98
Query: 239 XXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNK---RVLMEYIHRKK 382
K++ + +LY K GN +NK R LME I K+
Sbjct: 99 VRSLRRLLKIAKDRKELTNPEFWALYKKVGGNTVRNKAHLRQLMEEIVAKR 149
>UniRef50_A2YPT1 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 55
Score = 33.1 bits (72), Expect = 3.5
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +2
Query: 317 MKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 418
MK KGN+ NKR + +AEKAR + LSDQ
Sbjct: 1 MKVKGNMLNNKRGPYGEYPQVQAEKARKRTLSDQ 34
>UniRef50_Q2HGL4 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 388
Score = 33.1 bits (72), Expect = 3.5
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 79 QGWSRHQATCSSPLPRPCPQKH 144
Q W+ H A C SPLP P P ++
Sbjct: 147 QAWAAHDANCQSPLPPPTPSEN 168
>UniRef50_Q8DFA7 Cluster: Flagellar motor protein MotB; n=31;
Gammaproteobacteria|Rep: Flagellar motor protein MotB -
Vibrio vulnificus
Length = 300
Score = 32.7 bits (71), Expect = 4.6
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -1
Query: 436 IAAGLSLVAKHLRPGLLSLLPVDVLHEHTLVLEHITLRLH 317
I G S++A+ RPG P+DV+ + T+ + TL H
Sbjct: 51 IPKGTSIIAQEFRPGRPEPTPIDVIMQQTIDITQQTLEFH 90
>UniRef50_A6RYJ9 Cluster: Predicted protein; n=1; Botryotinia
fuckeliana B05.10|Rep: Predicted protein - Botryotinia
fuckeliana B05.10
Length = 72
Score = 32.7 bits (71), Expect = 4.6
Identities = 18/36 (50%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Frame = +1
Query: 91 RHQATCSSPL-PRPCPQKHRG-T*KGS-SLWLW*EK 189
RH TC+ P P CP H+G +GS S+WLW EK
Sbjct: 2 RHDTTCTPPFRPSICP-SHKGIASRGSGSMWLWGEK 36
>UniRef50_Q4QEU8 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 1009
Score = 32.3 bits (70), Expect = 6.1
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +1
Query: 7 VWLAPNAINALANTNSSPAHP*AAQGWSRHQATCSSPLPRP 129
V LA NA+++ A+ ++ P+HP AA + C+SP P
Sbjct: 725 VHLAENAVHSKASPSALPSHPTAAAPMAAQTPQCTSPSATP 765
>UniRef50_Q6ZUA0 Cluster: CDNA FLJ43879 fis, clone TESTI4008993;
n=3; Homo/Pan/Gorilla group|Rep: CDNA FLJ43879 fis,
clone TESTI4008993 - Homo sapiens (Human)
Length = 274
Score = 31.9 bits (69), Expect = 8.1
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = +1
Query: 4 PVWLAPNAINALANTNSSPAHP*AAQGWSRHQATCSSPLPRPCPQKH 144
PV L+PN A + N S A A WS+H S+PL R P +H
Sbjct: 27 PVSLSPNCSMAWSAANVSAALKGKALLWSQHAELASTPL-RAAPHQH 72
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 505,204,143
Number of Sequences: 1657284
Number of extensions: 10341636
Number of successful extensions: 30131
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 29174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30098
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 28855457139
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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