Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_K23
         (722 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.82 
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   7.6  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   7.6  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.6 bits (51), Expect = 0.82
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -2

Query: 367  ISYQFEVLDSRDCA*DFHDQWTNV 296
            I+Y F VLDS       HD W ++
Sbjct: 2353 INYGFAVLDSSSMTLKPHDSWADI 2376


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 301 LSIDRENLMHNRVNL 345
           L +DR+ L+H + NL
Sbjct: 626 LDLDRQGLLHRQFNL 640


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -3

Query: 447 CETCFSFFKYPLRPAICY 394
           CE C  FFK  +R  + Y
Sbjct: 103 CEGCKGFFKRTVRKDLSY 120


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,454
Number of Sequences: 336
Number of extensions: 2877
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)