BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_K23
(722 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439353-11|CAD27933.1| 615|Anopheles gambiae 30E5.11 protein. 34 0.004
AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein p... 33 0.007
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 32 0.021
M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein. 29 0.15
AY846632-1|AAW31598.1| 412|Anopheles gambiae SAGLIN protein. 26 1.0
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 26 1.0
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 26 1.4
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 24 4.1
Z32645-2|CAA83568.1| 259|Anopheles gambiae chymotrypsin-like pr... 24 5.5
Z18887-1|CAA79325.1| 259|Anopheles gambiae chymotrypsin 1 protein. 24 5.5
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 23 7.2
AJ439353-4|CAD27926.1| 338|Anopheles gambiae putative hox prote... 23 9.6
>AJ439353-11|CAD27933.1| 615|Anopheles gambiae 30E5.11 protein.
Length = 615
Score = 34.3 bits (75), Expect = 0.004
Identities = 29/121 (23%), Positives = 54/121 (44%), Gaps = 3/121 (2%)
Frame = +1
Query: 106 AKRMRLVRSQESEEHHEARLTACQERQARFRATETSAQQESRLSSHRSRMIATRIRENRE 285
AK +++ +E + Q+ + + T+T +Q L SH R++ R R +
Sbjct: 189 AKFCEVLKGREMQRQFRLEQEQLQQMRKQSVDTQTLSQANHWLKSHGDRLLEDRQRFDNY 248
Query: 286 QREARLSIDRENLMHNRVNLRLQTDRKSRL---SSQRVRIANGRSQGILEERKARLTADR 456
+RE +E ++ N+ +LQ RK L Q + + G + E+ +A L A +
Sbjct: 249 KREL-----KETMIRNQ---QLQRQRKQELIAEEQQSLEVIEGEMRRQQEQDRAALEASK 300
Query: 457 E 459
E
Sbjct: 301 E 301
>AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein
protein.
Length = 724
Score = 33.5 bits (73), Expect = 0.007
Identities = 20/104 (19%), Positives = 47/104 (45%)
Frame = +1
Query: 76 RSNLSQCSRNAKRMRLVRSQESEEHHEARLTACQERQARFRATETSAQQESRLSSHRSRM 255
R SQ R ++ + + Q+ E + +L Q+RQ + R + QQ+ + R
Sbjct: 240 RGRPSQRHRQPQQQQQQQQQQGERYVPPQLR--QQRQQQQRPRQQQQQQQQQQQQQGERY 297
Query: 256 IATRIRENREQREARLSIDRENLMHNRVNLRLQTDRKSRLSSQR 387
+ ++R+ R+Q++ + ++ + + Q ++ R Q+
Sbjct: 298 VPPQLRQQRQQQQHQQQQQQQQQQRQQQQRQQQRQQQQRQQQQQ 341
Score = 26.2 bits (55), Expect = 1.0
Identities = 22/123 (17%), Positives = 49/123 (39%)
Frame = +1
Query: 67 PRKRSNLSQCSRNAKRMRLVRSQESEEHHEARLTACQERQARFRATETSAQQESRLSSHR 246
P+ R Q R R + + Q+ ++ R Q RQ R + QQ+ + +
Sbjct: 267 PQLRQQRQQQQR--PRQQQQQQQQQQQQQGERYVPPQLRQQRQQQQHQQQQQQQQQQRQQ 324
Query: 247 SRMIATRIRENREQREARLSIDRENLMHNRVNLRLQTDRKSRLSSQRVRIANGRSQGILE 426
+ R ++ R+Q++ + R+ + + Q ++ + Q+ + + + L
Sbjct: 325 QQRQQQRQQQQRQQQQQQQQQQRQQQQRQQQQQQQQQHQQQQQQWQQQQQQQQQPRQSLP 384
Query: 427 ERK 435
RK
Sbjct: 385 HRK 387
Score = 23.8 bits (49), Expect = 5.5
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = +1
Query: 133 QESEEHHEARLTACQERQARFRATETSAQQESRLSSHRSRMIATRIRENREQRE 294
Q+S R TA ++RQ R R E QQ+ + + + + ++ R+Q++
Sbjct: 160 QQSSGQGGNRETA-RKRQQRLRRRERERQQQQQQQQQQQQQQQQQQQQQRQQQQ 212
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 31.9 bits (69), Expect = 0.021
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Frame = +1
Query: 127 RSQESEEHHEARLTACQERQARFRATETSAQQESRLSSHRSRMIATRIRENREQR--EAR 300
R + EEH ARL +ER R ++E L R R + + +EQR E R
Sbjct: 440 RMKLEEEHRAARLRE-EERAREAREAAIEREKERELREQREREQREKEQREKEQREKEER 498
Query: 301 LSIDRENLMHNRVNLRLQTDRKSRLSSQRVR 393
RE R + +R++ +R R
Sbjct: 499 ERQQREKEQREREQREKEREREAARERERER 529
Score = 29.5 bits (63), Expect = 0.11
Identities = 24/89 (26%), Positives = 35/89 (39%), Gaps = 3/89 (3%)
Frame = +1
Query: 61 RMPRKRSNLSQCSRNAKRMRLVRSQESEEHHEARLTACQERQARFRATETSAQQESRLSS 240
RM + + + R +R R R E E L +ER+ R + Q+E
Sbjct: 440 RMKLEEEHRAARLREEERAREAREAAIEREKERELREQREREQREKEQREKEQREKEERE 499
Query: 241 HRSRMIATRIRENR---EQREARLSIDRE 318
+ R R RE R +REA +RE
Sbjct: 500 RQQREKEQREREQREKEREREAARERERE 528
>M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein.
Length = 613
Score = 29.1 bits (62), Expect = 0.15
Identities = 18/109 (16%), Positives = 47/109 (43%), Gaps = 2/109 (1%)
Frame = +1
Query: 67 PRKRSNLSQCSRNAKRMRLVRSQESEEHHEARLTACQERQARFRATETSAQQESRLSSHR 246
P + + SRN + + + QE + + Q++Q + + + QQ+ + + +
Sbjct: 198 PMMTAQGAHSSRNRRGRQGPQQQEQRQQQQQHQQREQQQQQQQQQQQQQQQQQQQQRNQQ 257
Query: 247 SRMIATRIRENREQREARLS--IDRENLMHNRVNLRLQTDRKSRLSSQR 387
+ ++ +QRE + + ++N H R + Q R+ + ++
Sbjct: 258 REWQQQQQQQQHQQREQQQQQRVQQQNQQHQRQQQQQQQQRQQQQQQEQ 306
Score = 28.3 bits (60), Expect = 0.25
Identities = 22/143 (15%), Positives = 61/143 (42%), Gaps = 2/143 (1%)
Frame = +1
Query: 127 RSQESEEHHEARLTACQERQARFRATETSA--QQESRLSSHRSRMIATRIRENREQREAR 300
+ Q+ +E E T + RQ + +++ QQ+ + ++ + ++++ ++QR+ +
Sbjct: 299 QQQQQQEQQELWTTVVRRRQNTQQQQQSNQPQQQQQQTGRYQPPQMRQQLQQQQQQRQPQ 358
Query: 301 LSIDRENLMHNRVNLRLQTDRKSRLSSQRVRIANGRSQGILEERKARLTADREGHALSLE 480
+ + + + Q ++ R + + I+ G+++ E ++ + + E
Sbjct: 359 RYVVAGSSQQQQQQHQQQQQKRKRPKPELIEISPGQNE-TFESVSLKIRKAVDDNGTHKE 417
Query: 481 SESFTDRGIRLSSQRVRTANTRS 549
+ F G R +R RS
Sbjct: 418 LKDFIIMGRRTDKALLRLTLARS 440
>AY846632-1|AAW31598.1| 412|Anopheles gambiae SAGLIN protein.
Length = 412
Score = 26.2 bits (55), Expect = 1.0
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +1
Query: 145 EHHEAR--LTACQERQARFRATETSAQQESRLSSHRSRMIATRIRENREQREARL 303
+ H+ R LTACQER A A + S+Q +L R + R+ E +L
Sbjct: 69 QFHQVRENLTACQERAAAGPAPDPSSQFCQQLLDDAQRQMEQEHRQYAATLEEQL 123
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 26.2 bits (55), Expect = 1.0
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Frame = +1
Query: 316 ENLMHNRVNLRLQTDRKSRLSSQRVRIANGRSQGILEERKARLTADREGHALSLESESFT 495
E L+ NR+N ++ +LS Q+ GRS L+ + + A R ALSL +
Sbjct: 513 ERLLLNRLNEYIEDPESPQLSEQQFGFRRGRS--TLQAIQQVVDAGR--RALSLGRTNNR 568
Query: 496 DRG-IRLSSQRVRTA-NTRSQETLEE 567
DR + + + VR A NT S +++ E
Sbjct: 569 DRRCLMVVALDVRNAFNTASWQSIAE 594
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 25.8 bits (54), Expect = 1.4
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +1
Query: 316 ENLMHNRVNLRLQTDRKSRLSSQRVRIANGRS--QGILEERKARLTA 450
E L+ NR+N L+ S LS + G+S QGIL +A TA
Sbjct: 524 ERLILNRLNEFLENGETSHLSPNQYGFRRGKSTVQGILRVVQAGRTA 570
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 24.2 bits (50), Expect = 4.1
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 316 ENLMHNRVNLRLQTDRKSRLSSQRVRIANGRS 411
E L+ NR+N L+ RLS ++ GRS
Sbjct: 564 ERLILNRLNEHLEEPSSPRLSDRQFGFRRGRS 595
Score = 23.0 bits (47), Expect = 9.6
Identities = 15/48 (31%), Positives = 20/48 (41%)
Frame = +1
Query: 55 NVRMPRKRSNLSQCSRNAKRMRLVRSQESEEHHEARLTACQERQARFR 198
N R R + R +R L + + R A +ERQARFR
Sbjct: 1108 NERRNANRRAATARRREERRAGLPPTPPASPRTAQRRAALRERQARFR 1155
>Z32645-2|CAA83568.1| 259|Anopheles gambiae chymotrypsin-like
protease ANCHYM1 protein.
Length = 259
Score = 23.8 bits (49), Expect = 5.5
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -3
Query: 114 SFSIPAALGEVGSFSRHSYIMQYLPT 37
+F +P ALG F+R SY ++ T
Sbjct: 227 NFGVPCALGYPDGFARVSYYHDWVRT 252
>Z18887-1|CAA79325.1| 259|Anopheles gambiae chymotrypsin 1 protein.
Length = 259
Score = 23.8 bits (49), Expect = 5.5
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -3
Query: 114 SFSIPAALGEVGSFSRHSYIMQYLPT 37
+F +P ALG F+R SY ++ T
Sbjct: 227 NFGVPCALGYPDGFARVSYYHDWVRT 252
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 23.4 bits (48), Expect = 7.2
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +1
Query: 316 ENLMHNRVNLRLQTDRKSRLSSQRVRIANGRS 411
E L+ NR+N L+ RLS + GRS
Sbjct: 518 EQLILNRLNKHLEDPDSPRLSDAQYGFRRGRS 549
>AJ439353-4|CAD27926.1| 338|Anopheles gambiae putative hox protein
protein.
Length = 338
Score = 23.0 bits (47), Expect = 9.6
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 511 LSSQRVRTANTRSQETLEERE 573
LSS+R+RTA T +Q ERE
Sbjct: 194 LSSKRIRTAFTSTQLLELERE 214
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 682,036
Number of Sequences: 2352
Number of extensions: 13340
Number of successful extensions: 91
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 86
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73597131
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -