Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_K21
(737 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M36035-1|AAA03652.1| 169|Homo sapiens protein ( Human periphera... 173 7e-43
BT006949-1|AAP35595.1| 169|Homo sapiens benzodiazapine receptor... 173 7e-43
BC001110-1|AAH01110.1| 169|Homo sapiens translocator protein (1... 173 7e-43
AY383615-1|AAQ75703.1| 169|Homo sapiens benzodiazapine receptor... 173 7e-43
Z82214-1|CAB55884.1| 169|Homo sapiens translocator protein (18k... 171 2e-42
U12421-1|AAA83252.1| 169|Homo sapiens mitochondrial benzodiazep... 171 2e-42
CR456409-1|CAG30295.1| 169|Homo sapiens BZRP protein. 171 2e-42
AY998017-1|AAY45787.1| 169|Homo sapiens peripheral benzodiazepi... 171 2e-42
AF075590-1|AAC31173.1| 143|Homo sapiens peripheral-type benzodi... 165 1e-40
AF075589-1|AAC31172.1| 143|Homo sapiens peripheral-type benzodi... 165 1e-40
L21954-1|AAA18228.1| 169|Homo sapiens peripheral benzodiazepine... 131 2e-30
AL031778-2|CAB44739.1| 170|Homo sapiens protein ( Human DNA seq... 103 5e-22
AB076381-1|BAC00959.1| 61|Homo sapiens Peripheral-type Benzodi... 59 2e-08
AB076380-1|BAC00958.1| 62|Homo sapiens Peripheral-type Benzodi... 58 3e-08
AB076379-1|BAC00957.1| 62|Homo sapiens Peripheral-type Benzodi... 58 3e-08
AL831918-1|CAD38579.1| 810|Homo sapiens hypothetical protein pr... 31 4.3
AJ586138-1|CAE51938.1| 3395|Homo sapiens ubiquitin-specific prot... 31 4.3
AB011142-1|BAA25496.2| 3412|Homo sapiens KIAA0570 protein protein. 31 4.3
AB209076-1|BAD92313.1| 234|Homo sapiens Kv channel interacting ... 31 5.7
BC051314-1|AAH51314.1| 505|Homo sapiens solute carrier family 3... 30 7.5
AK128364-1|BAC87400.1| 168|Homo sapiens protein ( Homo sapiens ... 30 7.5
AK074100-1|BAB84926.1| 396|Homo sapiens FLJ00171 protein protein. 30 7.5
AL121747-11|CAO03633.1| 340|Homo sapiens RanBP-type and C3HC4-t... 30 10.0
AK126962-1|BAC86765.1| 143|Homo sapiens protein ( Homo sapiens ... 30 10.0
>M36035-1|AAA03652.1| 169|Homo sapiens protein ( Human peripheral
benzodiazepine receptor (hpbs) mRNA, complete cds. ).
Length = 169
Score = 173 bits (420), Expect = 7e-43
Identities = 76/158 (48%), Positives = 106/158 (67%)
Frame = +1
Query: 169 PALGSIILPNVGGWANGLFFAGQIRKDSSEKSWYDELKKPSWTPPKWVFGPAWTVLYSSM 348
PA+G + P++G + F G+ + WY L+KPSW PP WV GP W LYS+M
Sbjct: 7 PAMGFTLAPSLGCFVGSRFVHGEGLR------WYAGLQKPSWHPPHWVLGPVWGTLYSAM 60
Query: 349 GYASYLIWEECDGFTEDAVLPLTLYGVQLLLNWSWTPIFFGLKDFKLAFIEISVLSGAAV 528
GY SYL+W+E GFTE AV+PL LY QL LNW+W PIFFG + A +++ ++SGAA
Sbjct: 61 GYGSYLVWKELGGFTEKAVVPLGLYTGQLALNWAWPPIFFGARQMGWALVDLLLVSGAAA 120
Query: 529 ATTLSFGSVNKTAGLLLVPYLAWLGYASSLSYYIWKNN 642
ATT+++ V+ A LL PYLAWL +A++L+Y +W++N
Sbjct: 121 ATTVAWYQVSPLAARLLYPYLAWLAFATTLNYCVWRDN 158
>BT006949-1|AAP35595.1| 169|Homo sapiens benzodiazapine receptor
(peripheral) protein.
Length = 169
Score = 173 bits (420), Expect = 7e-43
Identities = 76/158 (48%), Positives = 106/158 (67%)
Frame = +1
Query: 169 PALGSIILPNVGGWANGLFFAGQIRKDSSEKSWYDELKKPSWTPPKWVFGPAWTVLYSSM 348
PA+G + P++G + F G+ + WY L+KPSW PP WV GP W LYS+M
Sbjct: 7 PAMGFTLAPSLGCFVGSRFVHGEGLR------WYAGLQKPSWHPPHWVLGPVWGTLYSAM 60
Query: 349 GYASYLIWEECDGFTEDAVLPLTLYGVQLLLNWSWTPIFFGLKDFKLAFIEISVLSGAAV 528
GY SYL+W+E GFTE AV+PL LY QL LNW+W PIFFG + A +++ ++SGAA
Sbjct: 61 GYGSYLVWKELGGFTEKAVVPLGLYTGQLALNWAWPPIFFGARQMGWALVDLLLVSGAAA 120
Query: 529 ATTLSFGSVNKTAGLLLVPYLAWLGYASSLSYYIWKNN 642
ATT+++ V+ A LL PYLAWL +A++L+Y +W++N
Sbjct: 121 ATTVAWYQVSPLAARLLYPYLAWLAFATTLNYCVWRDN 158
>BC001110-1|AAH01110.1| 169|Homo sapiens translocator protein
(18kDa) protein.
Length = 169
Score = 173 bits (420), Expect = 7e-43
Identities = 76/158 (48%), Positives = 106/158 (67%)
Frame = +1
Query: 169 PALGSIILPNVGGWANGLFFAGQIRKDSSEKSWYDELKKPSWTPPKWVFGPAWTVLYSSM 348
PA+G + P++G + F G+ + WY L+KPSW PP WV GP W LYS+M
Sbjct: 7 PAMGFTLAPSLGCFVGSRFVHGEGLR------WYAGLQKPSWHPPHWVLGPVWGTLYSAM 60
Query: 349 GYASYLIWEECDGFTEDAVLPLTLYGVQLLLNWSWTPIFFGLKDFKLAFIEISVLSGAAV 528
GY SYL+W+E GFTE AV+PL LY QL LNW+W PIFFG + A +++ ++SGAA
Sbjct: 61 GYGSYLVWKELGGFTEKAVVPLGLYTGQLALNWAWPPIFFGARQMGWALVDLLLVSGAAA 120
Query: 529 ATTLSFGSVNKTAGLLLVPYLAWLGYASSLSYYIWKNN 642
ATT+++ V+ A LL PYLAWL +A++L+Y +W++N
Sbjct: 121 ATTVAWYQVSPLAARLLYPYLAWLAFATTLNYCVWRDN 158
>AY383615-1|AAQ75703.1| 169|Homo sapiens benzodiazapine receptor
(peripheral) protein.
Length = 169
Score = 173 bits (420), Expect = 7e-43
Identities = 76/158 (48%), Positives = 106/158 (67%)
Frame = +1
Query: 169 PALGSIILPNVGGWANGLFFAGQIRKDSSEKSWYDELKKPSWTPPKWVFGPAWTVLYSSM 348
PA+G + P++G + F G+ + WY L+KPSW PP WV GP W LYS+M
Sbjct: 7 PAMGFTLAPSLGCFVGSRFVHGEGLR------WYAGLQKPSWHPPHWVLGPVWGTLYSAM 60
Query: 349 GYASYLIWEECDGFTEDAVLPLTLYGVQLLLNWSWTPIFFGLKDFKLAFIEISVLSGAAV 528
GY SYL+W+E GFTE AV+PL LY QL LNW+W PIFFG + A +++ ++SGAA
Sbjct: 61 GYGSYLVWKELGGFTEKAVVPLGLYTGQLALNWAWPPIFFGARQMGWALVDLLLVSGAAA 120
Query: 529 ATTLSFGSVNKTAGLLLVPYLAWLGYASSLSYYIWKNN 642
ATT+++ V+ A LL PYLAWL +A++L+Y +W++N
Sbjct: 121 ATTVAWYQVSPLAARLLYPYLAWLAFATTLNYCVWRDN 158
>Z82214-1|CAB55884.1| 169|Homo sapiens translocator protein (18kDa)
protein.
Length = 169
Score = 171 bits (416), Expect = 2e-42
Identities = 75/158 (47%), Positives = 105/158 (66%)
Frame = +1
Query: 169 PALGSIILPNVGGWANGLFFAGQIRKDSSEKSWYDELKKPSWTPPKWVFGPAWTVLYSSM 348
PA+G + P++G + F G+ + WY L+KPSW PP WV GP W LYS+M
Sbjct: 7 PAMGFTLAPSLGCFVGSRFVHGEGLR------WYAGLQKPSWHPPHWVLGPVWGTLYSAM 60
Query: 349 GYASYLIWEECDGFTEDAVLPLTLYGVQLLLNWSWTPIFFGLKDFKLAFIEISVLSGAAV 528
GY SYL+W+E GFTE AV+PL LY QL LNW+W PIFFG + A +++ ++SGAA
Sbjct: 61 GYGSYLVWKELGGFTEKAVVPLGLYTGQLALNWAWPPIFFGARQMGWALVDLLLVSGAAA 120
Query: 529 ATTLSFGSVNKTAGLLLVPYLAWLGYASSLSYYIWKNN 642
ATT+++ V+ A LL PYLAWL + ++L+Y +W++N
Sbjct: 121 ATTVAWYQVSPLAARLLYPYLAWLAFTTTLNYCVWRDN 158
>U12421-1|AAA83252.1| 169|Homo sapiens mitochondrial benzodiazepine
receptor protein.
Length = 169
Score = 171 bits (416), Expect = 2e-42
Identities = 75/158 (47%), Positives = 105/158 (66%)
Frame = +1
Query: 169 PALGSIILPNVGGWANGLFFAGQIRKDSSEKSWYDELKKPSWTPPKWVFGPAWTVLYSSM 348
PA+G + P++G + F G+ + WY L+KPSW PP WV GP W LYS+M
Sbjct: 7 PAMGFTLAPSLGCFVGSRFVHGEGLR------WYAGLQKPSWHPPHWVLGPVWGTLYSAM 60
Query: 349 GYASYLIWEECDGFTEDAVLPLTLYGVQLLLNWSWTPIFFGLKDFKLAFIEISVLSGAAV 528
GY SYL+W+E GFTE AV+PL LY QL LNW+W PIFFG + A +++ ++SGAA
Sbjct: 61 GYGSYLVWKELGGFTEKAVVPLGLYTGQLALNWAWPPIFFGARQMGWALVDLLLVSGAAA 120
Query: 529 ATTLSFGSVNKTAGLLLVPYLAWLGYASSLSYYIWKNN 642
ATT+++ V+ A LL PYLAWL + ++L+Y +W++N
Sbjct: 121 ATTVAWYQVSPLAARLLYPYLAWLAFTTTLNYCVWRDN 158
>CR456409-1|CAG30295.1| 169|Homo sapiens BZRP protein.
Length = 169
Score = 171 bits (416), Expect = 2e-42
Identities = 75/158 (47%), Positives = 105/158 (66%)
Frame = +1
Query: 169 PALGSIILPNVGGWANGLFFAGQIRKDSSEKSWYDELKKPSWTPPKWVFGPAWTVLYSSM 348
PA+G + P++G + F G+ + WY L+KPSW PP WV GP W LYS+M
Sbjct: 7 PAMGFTLAPSLGCFVGSRFVHGEGLR------WYAGLQKPSWHPPHWVLGPVWGTLYSAM 60
Query: 349 GYASYLIWEECDGFTEDAVLPLTLYGVQLLLNWSWTPIFFGLKDFKLAFIEISVLSGAAV 528
GY SYL+W+E GFTE AV+PL LY QL LNW+W PIFFG + A +++ ++SGAA
Sbjct: 61 GYGSYLVWKELGGFTEKAVVPLGLYTGQLALNWAWPPIFFGARQMGWALVDLLLVSGAAA 120
Query: 529 ATTLSFGSVNKTAGLLLVPYLAWLGYASSLSYYIWKNN 642
ATT+++ V+ A LL PYLAWL + ++L+Y +W++N
Sbjct: 121 ATTVAWYQVSPLAARLLYPYLAWLAFTTTLNYCVWRDN 158
>AY998017-1|AAY45787.1| 169|Homo sapiens peripheral benzodiazepine
receptor protein.
Length = 169
Score = 171 bits (416), Expect = 2e-42
Identities = 75/158 (47%), Positives = 105/158 (66%)
Frame = +1
Query: 169 PALGSIILPNVGGWANGLFFAGQIRKDSSEKSWYDELKKPSWTPPKWVFGPAWTVLYSSM 348
PA+G + P++G + F G+ + WY L+KPSW PP WV GP W LYS+M
Sbjct: 7 PAMGFTLAPSLGCFVGSRFVHGEGLR------WYAGLQKPSWHPPHWVLGPVWGTLYSAM 60
Query: 349 GYASYLIWEECDGFTEDAVLPLTLYGVQLLLNWSWTPIFFGLKDFKLAFIEISVLSGAAV 528
GY SYL+W+E GFTE AV+PL LY QL LNW+W PIFFG + A +++ ++SGAA
Sbjct: 61 GYGSYLVWKELGGFTEKAVVPLGLYTGQLALNWAWPPIFFGARQMGWALVDLLLVSGAAA 120
Query: 529 ATTLSFGSVNKTAGLLLVPYLAWLGYASSLSYYIWKNN 642
ATT+++ V+ A LL PYLAWL + ++L+Y +W++N
Sbjct: 121 ATTVAWYQVSPLAARLLYPYLAWLAFTTTLNYCVWRDN 158
>AF075590-1|AAC31173.1| 143|Homo sapiens peripheral-type
benzodiazepine receptor protein.
Length = 143
Score = 165 bits (402), Expect = 1e-40
Identities = 68/126 (53%), Positives = 91/126 (72%)
Frame = +1
Query: 265 WYDELKKPSWTPPKWVFGPAWTVLYSSMGYASYLIWEECDGFTEDAVLPLTLYGVQLLLN 444
WY L+KPSW PP WV GP W LYS+MGY SYL+W+E GFTE AV+PL LY QL LN
Sbjct: 7 WYAGLQKPSWHPPHWVLGPVWGTLYSAMGYGSYLVWKELGGFTEKAVVPLGLYTGQLALN 66
Query: 445 WSWTPIFFGLKDFKLAFIEISVLSGAAVATTLSFGSVNKTAGLLLVPYLAWLGYASSLSY 624
W+W PIFFG + A +++ ++SGAA ATT+++ V+ A LL PYLAWL + ++L+Y
Sbjct: 67 WAWPPIFFGARQMGWALVDLLLVSGAAAATTVAWYQVSPLAARLLYPYLAWLAFTTTLNY 126
Query: 625 YIWKNN 642
+W++N
Sbjct: 127 CVWRDN 132
>AF075589-1|AAC31172.1| 143|Homo sapiens peripheral-type
benzodiazepine receptor protein.
Length = 143
Score = 165 bits (402), Expect = 1e-40
Identities = 68/126 (53%), Positives = 91/126 (72%)
Frame = +1
Query: 265 WYDELKKPSWTPPKWVFGPAWTVLYSSMGYASYLIWEECDGFTEDAVLPLTLYGVQLLLN 444
WY L+KPSW PP WV GP W LYS+MGY SYL+W+E GFTE AV+PL LY QL LN
Sbjct: 7 WYAGLQKPSWHPPHWVLGPVWGTLYSAMGYGSYLVWKELGGFTEKAVVPLGLYTGQLALN 66
Query: 445 WSWTPIFFGLKDFKLAFIEISVLSGAAVATTLSFGSVNKTAGLLLVPYLAWLGYASSLSY 624
W+W PIFFG + A +++ ++SGAA ATT+++ V+ A LL PYLAWL + ++L+Y
Sbjct: 67 WAWPPIFFGARQMGWALVDLLLVSGAAAATTVAWYQVSPLAARLLYPYLAWLAFTTTLNY 126
Query: 625 YIWKNN 642
+W++N
Sbjct: 127 CVWRDN 132
>L21954-1|AAA18228.1| 169|Homo sapiens peripheral benzodiazepine
receptor protein.
Length = 169
Score = 131 bits (317), Expect = 2e-30
Identities = 67/162 (41%), Positives = 97/162 (59%), Gaps = 4/162 (2%)
Frame = +1
Query: 169 PALGSIILPNVGGWANGLFFAGQIRKDSSEKSWYDELKKPSWTPPKWVFGPAWTVLYSSM 348
PA+G + P++G + F G+ + WY L+KPSW PP WV GP W LYS+M
Sbjct: 7 PAMGFTLAPSLGCFVGSRFVHGEGLR------WYAGLQKPSWHPPHWVLGPVWGTLYSAM 60
Query: 349 GYASYLIWEECDGFTEDAV-LPLTLY---GVQLLLNWSWTPIFFGLKDFKLAFIEISVLS 516
GY SYL+W+E GFTE AV P L+ G +L P G + A +++ ++S
Sbjct: 61 GYGSYLVWKELGGFTEKAVGSPGPLHWAAGPEL----GMAPHLLGARQMGWALVDLLLVS 116
Query: 517 GAAVATTLSFGSVNKTAGLLLVPYLAWLGYASSLSYYIWKNN 642
GAA ATT+++ V+ A LL PYLAWL +A++L+Y +W++N
Sbjct: 117 GAAAATTVAWYQVSPLAARLLYPYLAWLAFATTLNYCVWRDN 158
>AL031778-2|CAB44739.1| 170|Homo sapiens protein ( Human DNA
sequence from clone RP1-34B21 on chromosome 6p12.1-21.1.
).
Length = 170
Score = 103 bits (248), Expect = 5e-22
Identities = 52/131 (39%), Positives = 79/131 (60%), Gaps = 1/131 (0%)
Frame = +1
Query: 265 WYDELKKPSWTPPKWVFGPAWTVLYSSMGYASYLIWEECDG-FTEDAVLPLTLYGVQLLL 441
W + + SW P V T +YS +GYASYL+W++ G LPL LY VQL +
Sbjct: 30 WCEGPRMLSWCPFYKVLLLVQTAIYSVVGYASYLVWKDLGGGLGWPLALPLGLYAVQLTI 89
Query: 442 NWSWTPIFFGLKDFKLAFIEISVLSGAAVATTLSFGSVNKTAGLLLVPYLAWLGYASSLS 621
+W+ +FF + + LA + + +L G V+T L + +NK A LLL+PYLAWL S+L+
Sbjct: 90 SWTVLVLFFTVHNPGLALLHLLLLYGLVVSTALIWHPINKLAALLLLPYLAWLTVTSALT 149
Query: 622 YYIWKNNPKPV 654
Y++W+++ PV
Sbjct: 150 YHLWRDSLCPV 160
>AB076381-1|BAC00959.1| 61|Homo sapiens Peripheral-type
Benzodiazepine Receptor protein.
Length = 61
Score = 58.8 bits (136), Expect = 2e-08
Identities = 26/61 (42%), Positives = 35/61 (57%)
Frame = +1
Query: 169 PALGSIILPNVGGWANGLFFAGQIRKDSSEKSWYDELKKPSWTPPKWVFGPAWTVLYSSM 348
PA+G + P++G + F G+ + WY L+KPSW PP WV GP W LYS+M
Sbjct: 7 PAMGFTLAPSLGCFVGSRFVHGEGLR------WYTGLQKPSWHPPHWVLGPVWGTLYSAM 60
Query: 349 G 351
G
Sbjct: 61 G 61
>AB076380-1|BAC00958.1| 62|Homo sapiens Peripheral-type
Benzodiazepine Receptor protein.
Length = 62
Score = 58.0 bits (134), Expect = 3e-08
Identities = 23/51 (45%), Positives = 39/51 (76%)
Frame = +1
Query: 490 AFIEISVLSGAAVATTLSFGSVNKTAGLLLVPYLAWLGYASSLSYYIWKNN 642
A +++ ++SGAA ATT+++ V+ A LL PYLAWL +A++L+Y +W++N
Sbjct: 1 ALVDLLLVSGAAAATTVAWYQVSPLAARLLYPYLAWLAFATTLNYCVWRDN 51
>AB076379-1|BAC00957.1| 62|Homo sapiens Peripheral-type
Benzodiazepine Receptor protein.
Length = 62
Score = 58.0 bits (134), Expect = 3e-08
Identities = 23/51 (45%), Positives = 39/51 (76%)
Frame = +1
Query: 490 AFIEISVLSGAAVATTLSFGSVNKTAGLLLVPYLAWLGYASSLSYYIWKNN 642
A +++ ++SGAA ATT+++ V+ A LL PYLAWL +A++L+Y +W++N
Sbjct: 1 ALVDLLLVSGAAAATTVAWYQVSPLAARLLYPYLAWLAFATTLNYCVWRDN 51
>AL831918-1|CAD38579.1| 810|Homo sapiens hypothetical protein
protein.
Length = 810
Score = 31.1 bits (67), Expect = 4.3
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +3
Query: 111 TSLQFLPIIRFKXFRNGKLACTWF--NYPSKCWWMGQWIVFCRSNPQRQ 251
T LQ++ ++ K F N + AC WF WW Q ++ C + RQ
Sbjct: 602 TMLQWIELLT-KQFNNSQAACEWFLDRMADDDWWPMQILIKCPNQIVRQ 649
>AJ586138-1|CAE51938.1| 3395|Homo sapiens ubiquitin-specific
proteinase 34 protein.
Length = 3395
Score = 31.1 bits (67), Expect = 4.3
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +3
Query: 111 TSLQFLPIIRFKXFRNGKLACTWF--NYPSKCWWMGQWIVFCRSNPQRQ 251
T LQ++ ++ K F N + AC WF WW Q ++ C + RQ
Sbjct: 2173 TMLQWIELLT-KQFNNSQAACEWFLDRMADDDWWPMQILIKCPNQIVRQ 2220
>AB011142-1|BAA25496.2| 3412|Homo sapiens KIAA0570 protein protein.
Length = 3412
Score = 31.1 bits (67), Expect = 4.3
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +3
Query: 111 TSLQFLPIIRFKXFRNGKLACTWF--NYPSKCWWMGQWIVFCRSNPQRQ 251
T LQ++ ++ K F N + AC WF WW Q ++ C + RQ
Sbjct: 2190 TMLQWIELLT-KQFNNSQAACEWFLDRMADDDWWPMQILIKCPNQIVRQ 2237
>AB209076-1|BAD92313.1| 234|Homo sapiens Kv channel interacting
protein 3 variant protein.
Length = 234
Score = 30.7 bits (66), Expect = 5.7
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +1
Query: 154 VMANWPALGSIILPNVGGWANGLFFAGQIRKDSSEKSWYDELK-KPSWTPPKWVFGPAWT 330
+M+ LGS + GWA GL + +D +S +DE + PS W GP W
Sbjct: 65 IMSPTNNLGSQLQTTETGWAPGLRKFTETPEDQRTRSEWDEARAPPSALGDAWHPGPLWQ 124
Query: 331 VLYSS 345
SS
Sbjct: 125 ERSSS 129
>BC051314-1|AAH51314.1| 505|Homo sapiens solute carrier family 37
(glycerol-3-phosphate transporter), member 2 protein.
Length = 505
Score = 30.3 bits (65), Expect = 7.5
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -3
Query: 351 SHAAVENSPSWTKYPLWGSPAWLL*FIIPGLFTAVFADLT 232
SH +V N +W + W L FI+PG+ TAV +T
Sbjct: 186 SHTSVGNILGSLIAGIWVNGQWGLSFIVPGIITAVMGVIT 225
>AK128364-1|BAC87400.1| 168|Homo sapiens protein ( Homo sapiens
cDNA FLJ46507 fis, clone THYMU3031146. ).
Length = 168
Score = 30.3 bits (65), Expect = 7.5
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -3
Query: 342 AVENSPSWTKYPLWGSPAWLL*FIIPGLFTAVFADLTG 229
AV++S W + LWG + L ++ LFT F+ TG
Sbjct: 62 AVQHSSCWDRGSLWGRQSHLGLQMLESLFTGTFSSRTG 99
>AK074100-1|BAB84926.1| 396|Homo sapiens FLJ00171 protein protein.
Length = 396
Score = 30.3 bits (65), Expect = 7.5
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -3
Query: 351 SHAAVENSPSWTKYPLWGSPAWLL*FIIPGLFTAVFADLT 232
SH +V N +W + W L FI+PG+ TAV +T
Sbjct: 197 SHTSVGNILGSLIAGIWVNGQWGLSFIVPGIITAVMGVIT 236
>AL121747-11|CAO03633.1| 340|Homo sapiens RanBP-type and C3HC4-type
zinc finger containing 1 protein.
Length = 340
Score = 29.9 bits (64), Expect = 10.0
Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 6/53 (11%)
Frame = +2
Query: 488 WHSLRSQCCPGQQWQRHCHSAVSIRQP------VCYSYHTWLGSDMPAPFLTT 628
W S S+C G W + S S R P C S H W GS AP T+
Sbjct: 39 WASRTSRCSRGALWSQAPQSPGSPRNPDGGSQMQCLSPHRWAGSAPGAPSSTS 91
>AK126962-1|BAC86765.1| 143|Homo sapiens protein ( Homo sapiens
cDNA FLJ45015 fis, clone BRAWH3014639. ).
Length = 143
Score = 29.9 bits (64), Expect = 10.0
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 491 HSLRSQCCPGQQWQRHCHSAVSIRQPVCYSYH 586
H+L+S CP W C S++ RQ V ++ H
Sbjct: 36 HALQSSSCPASAWTAQCPSSLQ-RQGVSWALH 66
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,065,053
Number of Sequences: 237096
Number of extensions: 2833730
Number of successful extensions: 13306
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 13071
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13299
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8791154398
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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