Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_K18
         (415 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0195 + 1612938-1613003,1613026-1613161,1614624-1614725,161...   101   3e-22
02_01_0089 + 633642-633644,633728-633863,635356-635457,635565-63...   100   9e-22
02_05_1204 + 34936696-34936698,34936809-34936944,34937794-349378...    98   3e-21
08_01_0842 - 8252232-8253155                                           27   4.5  
11_06_0288 - 21962546-21962977,21963041-21963211,21963411-21963788     27   5.9  

>08_01_0195 +
           1612938-1613003,1613026-1613161,1614624-1614725,
           1614833-1614876
          Length = 115

 Score =  101 bits (241), Expect = 3e-22
 Identities = 43/93 (46%), Positives = 59/93 (63%)
 Frame = +1

Query: 13  ANLPQGPSSFGQRRNHPHPXCXICGLSSXHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXX 192
           +N+ +G  SFG+RRN  H  C  CG  S H+QKS C+ CGYPAA++R Y+WSVKA     
Sbjct: 20  SNVGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSTCSSCGYPAARIRKYNWSVKAIRRKT 79

Query: 193 XXXXXMRHLKIVRRRFRNGFKEGKPTPPKKAVA 291
                MR+++ V RRF++ F+EG    P+K  A
Sbjct: 80  TGTGRMRYMRHVPRRFKSNFREGTEATPRKRAA 112


>02_01_0089 +
           633642-633644,633728-633863,635356-635457,635565-635608
          Length = 94

 Score = 99.5 bits (237), Expect = 9e-22
 Identities = 42/91 (46%), Positives = 58/91 (63%)
 Frame = +1

Query: 25  QGPSSFGQRRNHPHPXCXICGLSSXHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXXX 204
           +G  SFG+RRN  H  C  CG  S H+QKS C+ CGYPAA++R Y+WSVKA         
Sbjct: 3   KGTGSFGKRRNKTHTLCVRCGRRSFHLQKSTCSSCGYPAARIRKYNWSVKAIRRKTTGTG 62

Query: 205 XMRHLKIVRRRFRNGFKEGKPTPPKKAVASS 297
            MR+++ V RRF++ F+EG    P+K  A++
Sbjct: 63  RMRYMRHVPRRFKSNFREGTEATPRKRAAAA 93


>02_05_1204 +
           34936696-34936698,34936809-34936944,34937794-34937895,
           34938153-34938199
          Length = 95

 Score = 97.9 bits (233), Expect = 3e-21
 Identities = 42/91 (46%), Positives = 58/91 (63%)
 Frame = +1

Query: 25  QGPSSFGQRRNHPHPXCXICGLSSXHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXXX 204
           +G  SFG+RRN  H  C  CG  S H+QKS C+ CGYPAA++R Y+WSVKA         
Sbjct: 3   KGTGSFGKRRNKTHTLCVRCGRRSFHLQKSTCSSCGYPAARIRKYNWSVKAIRRKTTGTG 62

Query: 205 XMRHLKIVRRRFRNGFKEGKPTPPKKAVASS 297
            MR+L+ V +RF++ F+EG    P+K  A++
Sbjct: 63  RMRYLRHVPKRFKSNFREGTEAAPRKKGAAA 93


>08_01_0842 - 8252232-8253155
          Length = 307

 Score = 27.5 bits (58), Expect = 4.5
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +1

Query: 31  PSSFGQRRNHPHPXCXICGLSSXH 102
           P + G +R HPHP C   G    H
Sbjct: 180 PLAGGVKRKHPHPPCAAAGDGHGH 203


>11_06_0288 - 21962546-21962977,21963041-21963211,21963411-21963788
          Length = 326

 Score = 27.1 bits (57), Expect = 5.9
 Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
 Frame = +3

Query: 132 ISCSKITXLPLVSEG*AQEDYWNW--PHASFEDC 227
           I+   +T +  +S   + +D W W  PH  +EDC
Sbjct: 116 IALPPVTTIEQLSIARSGDDKWTWLPPHKDYEDC 149


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,808,911
Number of Sequences: 37544
Number of extensions: 154636
Number of successful extensions: 319
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 308
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 319
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 742607976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)