Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_K17
(760 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC106.02c |srx1||sulfiredoxin|Schizosaccharomyces pombe|chr 2|... 28 1.3
SPCC2H8.05c ||SPCC63.01c|sequence orphan|Schizosaccharomyces pom... 28 1.7
SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces pomb... 27 2.9
SPAC4G8.12c |||alpha-1,2-mannosyltransferase |Schizosaccharomyce... 27 2.9
SPBC530.04 |mod5||Tea1 anchoring protein Mod5|Schizosaccharomyce... 27 3.8
SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 26 5.1
SPBC20F10.08c |||conserved eukaryotic protein|Schizosaccharomyce... 26 5.1
SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomy... 26 5.1
SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr 1||... 26 6.7
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 25 8.9
>SPBC106.02c |srx1||sulfiredoxin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 124
Score = 28.3 bits (60), Expect = 1.3
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +3
Query: 450 EPVQLGPNTVILYEQSGNPSNFAFGGMWTM---DSSGR 554
E +L P V+ +++SG P FAFGG + D +GR
Sbjct: 57 EAGELPPVDVLTFKKSGKPYYFAFGGCHRLRAHDEAGR 94
>SPCC2H8.05c ||SPCC63.01c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 217
Score = 27.9 bits (59), Expect = 1.7
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +3
Query: 582 VKGEPEEETGNFVQNNTEVSTQQVTEQPNTFXQFE--ISNVTSNSNVEQQEY 731
V+ E EE+T N N+ E+STQ+ E + + S T ++E QE+
Sbjct: 131 VREEQEEKTDNEDDNDVEISTQESLENNGLAEKKDDTSSLATLEDDIEGQEF 182
>SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1018
Score = 27.1 bits (57), Expect = 2.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 466 VRTLSSFTSRAGTPRILPLAVCGLWTPR 549
VRT + + TPR+ P+ C L TPR
Sbjct: 59 VRTPTKIKEKYSTPRLSPVHRCALPTPR 86
>SPAC4G8.12c |||alpha-1,2-mannosyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 27.1 bits (57), Expect = 2.9
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 467 TELHWLPFHVDEDRLLEVPFD*LASVH 387
T LH++P+HVD D E+P L H
Sbjct: 479 TMLHYIPYHVDLDDTDELPLAELIMNH 505
>SPBC530.04 |mod5||Tea1 anchoring protein Mod5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 26.6 bits (56), Expect = 3.8
Identities = 21/87 (24%), Positives = 37/87 (42%), Gaps = 3/87 (3%)
Frame = +3
Query: 486 YEQSGNPSNFAFG-GMWTMDSSGRIVMAET--IYDVKGEPEEETGNFVQNNTEVSTQQVT 656
++ S N ++ F G T + RI +++ +YDV E+ S +
Sbjct: 321 FQSSYNDADRPFQVGAQTQSTPNRISRSDSPIVYDVDTHSEDNASTASSEAISQSMRSFQ 380
Query: 657 EQPNTFXQFEISNVTSNSNVEQQEYEV 737
QPNT F TS + ++QE ++
Sbjct: 381 PQPNTGSPF--PRFTSTNTEDEQESDI 405
>SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 513
Score = 26.2 bits (55), Expect = 5.1
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = +3
Query: 384 IVHTGQLVE---GNFEQPVFVNMKGEPVQLGPNTVILYEQSGNPSNFAFG 524
I G ++E G+ QP +GEP ++ SGNP ++A+G
Sbjct: 299 ITDLGSILERIFGSLNQPGAQQGEGEPFNPANMFSNIFNLSGNPGDYAWG 348
>SPBC20F10.08c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 747
Score = 26.2 bits (55), Expect = 5.1
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +3
Query: 666 NTFXQFEISNVTSNSNVEQQEYEVAII 746
N + EIS +T+N VE++ E+ ++
Sbjct: 441 NKYSSTEISQITTNREVEEENEEILLV 467
>SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 991
Score = 26.2 bits (55), Expect = 5.1
Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 4/76 (5%)
Frame = +3
Query: 522 GGMWTMDSSGRIVMAETIYDVKGEPEEETGNFVQ----NNTEVSTQQVTEQPNTFXQFEI 689
GG T+D S + AE I G E++ ++ E ++ + N + +
Sbjct: 366 GGYLTLDGSVNLARAEVILSAVGNQEDDIFKRLKQQEDRRNENYRRRQQRESNQESESYV 425
Query: 690 SNVTSNSNVEQQEYEV 737
NV +VE Q EV
Sbjct: 426 DNVVIQRSVETQSTEV 441
>SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1367
Score = 25.8 bits (54), Expect = 6.7
Identities = 6/24 (25%), Positives = 20/24 (83%)
Frame = -3
Query: 281 LARFVTFTFYNSLLFTFLVHFFKF 210
+++ ++F FY ++++TF++ +++F
Sbjct: 1089 MSQMISFFFYKNVIWTFILFWYQF 1112
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 25.4 bits (53), Expect = 8.9
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -1
Query: 457 TGSPFMLTKTGCSKFPSTNWPVCT 386
TGSP +T T C+ S + P+ T
Sbjct: 66 TGSPVEITSTSCTTDTSASTPIIT 89
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,827,124
Number of Sequences: 5004
Number of extensions: 55112
Number of successful extensions: 182
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 182
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 363302114
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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