Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_K17
         (760 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0676 + 5062778-5063089,5063912-5064194,5064883-5065976           29   4.0  
05_05_0389 + 24590331-24590529,24591068-24591392,24591519-245916...    29   5.3  
11_01_0515 + 4003167-4003229,4003318-4003738,4004224-4004367,400...    28   9.3  

>07_01_0676 + 5062778-5063089,5063912-5064194,5064883-5065976
          Length = 562

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -2

Query: 114 VYLTVLNENRWHSVM*INISLCFPCVI 34
           VYLTVL   RW + + I I  C P V+
Sbjct: 523 VYLTVLPTERWLAYLVIAIGACTPAVV 549


>05_05_0389 +
           24590331-24590529,24591068-24591392,24591519-24591617,
           24591861-24592006,24592519-24592574
          Length = 274

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = +3

Query: 390 HTGQLVEGNFEQPVFVNMKGEPVQLGPNTVILYEQSGNPSNFAFGG 527
           H+G+   G ++  V+V +KG+ V L    ++ Y      S+ A GG
Sbjct: 77  HSGRETAGRWQNTVWVMVKGDKVALSKTCLLRYYHKKLKSSSANGG 122


>11_01_0515 +
           4003167-4003229,4003318-4003738,4004224-4004367,
           4004474-4004556,4004661-4004775,4005309-4005400,
           4005558-4005612,4005689-4005834,4005888-4006001,
           4006149-4006342,4006985-4007112,4008526-4008583,
           4009800-4009876,4010214-4010263,4010336-4010515,
           4010633-4010731,4010816-4011133,4011221-4011281,
           4011693-4012781,4012951-4013005,4013133-4013291,
           4013923-4014442
          Length = 1406

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = +1

Query: 499 GTPRILPLAVCGLWTPRAE*LWQKRYMTSKVNRKRRPVTSY 621
           G+  ++P   CGL     E  W K  +   +  K+ PV S+
Sbjct: 806 GSKEVIPQEYCGLEVLSGEAAWSKNVLVPSLPIKKYPVHSF 846


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,452,002
Number of Sequences: 37544
Number of extensions: 327447
Number of successful extensions: 841
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 814
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 841
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2027850416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)