Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_K17
         (760 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    26   0.44 
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         25   0.77 
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    25   0.77 
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    25   0.77 
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          24   1.8  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          24   1.8  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          24   1.8  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          24   1.8  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          24   1.8  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          24   1.8  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          24   1.8  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    24   1.8  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    23   2.4  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    23   3.1  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    23   4.1  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    22   5.4  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    21   9.5  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    21   9.5  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   9.5  

>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 25.8 bits (54), Expect = 0.44
 Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = +3

Query: 45  ENKD*CLFTSQNAI-GFHLKLLNTLSINENLN*DHTMSLTGCGVDNKVYLIVL 200
           +NK+  L   QNA   FH    +TL+ N +   D   +LT   VDNKVY + L
Sbjct: 206 DNKN-TLIIYQNADDSFHRLSSHTLNHNSDKMSDQQENLTLKEVDNKVYGMAL 257


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 25.0 bits (52), Expect = 0.77
 Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = -3

Query: 434 EDRLLEVP-FD*LASVHYLLTLNGYFNDLIRHDFNF 330
           ++ L  VP FD   +  Y+L L+     ++ +DFNF
Sbjct: 360 KEALPHVPIFDRYINREYILVLSNKMQKMVNNDFNF 395


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 25.0 bits (52), Expect = 0.77
 Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = -3

Query: 434 EDRLLEVP-FD*LASVHYLLTLNGYFNDLIRHDFNF 330
           ++ L  VP FD   +  Y+L L+     ++ +DFNF
Sbjct: 360 KEALPHVPIFDRYINREYILVLSNKMQKMVNNDFNF 395


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 25.0 bits (52), Expect = 0.77
 Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = -3

Query: 434 EDRLLEVP-FD*LASVHYLLTLNGYFNDLIRHDFNF 330
           ++ L  VP FD   +  Y+L L+     ++ +DFNF
Sbjct: 360 KEALPHVPIFDRYINREYILVLSNKMQKMVNNDFNF 395


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +1

Query: 268 TNLARARRRRLWSIVKVTKKEKLKSCRIKSLKYPLR 375
           T   R RRRR W I +  ++E  +  +   L+Y LR
Sbjct: 31  TQEERLRRRREWMIQQEREREHERLKKKMILEYELR 66


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +1

Query: 268 TNLARARRRRLWSIVKVTKKEKLKSCRIKSLKYPLR 375
           T   R RRRR W I +  ++E  +  +   L+Y LR
Sbjct: 31  TQEERLRRRREWMIQQEREREHERLKKKMILEYELR 66


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +1

Query: 268 TNLARARRRRLWSIVKVTKKEKLKSCRIKSLKYPLR 375
           T   R RRRR W I +  ++E  +  +   L+Y LR
Sbjct: 31  TQEERLRRRREWMIQQEREREHERLKKKMILEYELR 66


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +1

Query: 268 TNLARARRRRLWSIVKVTKKEKLKSCRIKSLKYPLR 375
           T   R RRRR W I +  ++E  +  +   L+Y LR
Sbjct: 31  TQEERLRRRREWMIQQEREREHERLKKKMILEYELR 66


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +1

Query: 268 TNLARARRRRLWSIVKVTKKEKLKSCRIKSLKYPLR 375
           T   R RRRR W I +  ++E  +  +   L+Y LR
Sbjct: 31  TQEERLRRRREWMIQQEREREHERLKKKMILEYELR 66


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +1

Query: 268 TNLARARRRRLWSIVKVTKKEKLKSCRIKSLKYPLR 375
           T   R RRRR W I +  ++E  +  +   L+Y LR
Sbjct: 31  TQEERLRRRREWMIQQEREREHERLKKKMILEYELR 66


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +1

Query: 268 TNLARARRRRLWSIVKVTKKEKLKSCRIKSLKYPLR 375
           T   R RRRR W I +  ++E  +  +   L+Y LR
Sbjct: 31  TQEERLRRRREWMIQQEREREHERLKKKMILEYELR 66


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +1

Query: 268 TNLARARRRRLWSIVKVTKKEKLKSCRIKSLKYPLR 375
           T   R RRRR W I +  ++E  +  +   L+Y LR
Sbjct: 31  TQEERLRRRREWMIQQEREREHERLKKKMILEYELR 66


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = -3

Query: 401 LASVHYLLTLNGYFNDLIRHDFNFSFFVTFTIDHSLLLLAL 279
           +  ++ L+    Y NDL  HDF+    +  T     L LAL
Sbjct: 327 MPDLNALIATGLYINDLSMHDFSRDLMLAGTQQSVELKLAL 367


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 386 YLLTLNGYFNDLIRHDFNFS 327
           Y+L L+     +I +DFNF+
Sbjct: 380 YMLALSNRMQKIINNDFNFN 399


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
            protein.
          Length = 1308

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -1

Query: 634  SVLFCTKLPVSSSGSPLTSYIVSAITILP 548
            SVL   +  V+SS S +T+   +  TILP
Sbjct: 940  SVLHSAQSVVASSASNVTNVTTNLTTILP 968


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -3

Query: 386 YLLTLNGYFNDLIRHDFNF 330
           Y+L L+     ++ +DFNF
Sbjct: 378 YMLALSNRMQKIVNNDFNF 396


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +3

Query: 546 SGRIVMAETIYDVKGEPEEETGNFVQNNTEVSTQQVTE 659
           +GR ++  T  D K   +   G  V+NN+EVS  +  E
Sbjct: 362 AGRFLIL-TESDTKLSSQGILGEDVENNSEVSKSRTKE 398


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -3

Query: 386 YLLTLNGYFNDLIRHDFNF 330
           Y+L L+     ++  DFNF
Sbjct: 375 YMLVLSNRMQKIVNDDFNF 393


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 466 PSCTGSPFMLTKTG 425
           PSC G P +LT  G
Sbjct: 368 PSCGGGPTILTTPG 381


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,536
Number of Sequences: 438
Number of extensions: 3807
Number of successful extensions: 21
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23875740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)