Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_K14
         (858 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   3.1  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   7.1  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    22   7.1  
L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protei...    21   9.4  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   9.4  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   9.4  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 11/43 (25%), Positives = 18/43 (41%)
 Frame = +2

Query: 152  EYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAI 280
            EYPKC+ V  +       +     +R  S     KN ++  A+
Sbjct: 2443 EYPKCWQVDCNKGPDSDKEAFAAFVRELSAAFKPKNLLLSAAV 2485


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 354 NTKPTLPLMCGNSFSRAGLL 295
           N KP +  +CG S++R   L
Sbjct: 246 NQKPNVCRICGKSYARPSTL 265


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -1

Query: 747 LATPAWNLARRSSGLMSRISGAKIVPESYTCLTT 646
           L+TP+ + A +SSGL S +S +   P      TT
Sbjct: 129 LSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTT 162


>L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protein
           protein.
          Length = 74

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = +1

Query: 247 HGKKHYDAQSHQRPPGQQSSPRETVATHQGQRWLRVH 357
           H K H    + +RP   +   R+ V     +R LRVH
Sbjct: 24  HLKTHMRLHTGERPYRCEHCDRQFVQVANLRRHLRVH 60


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory
          receptor candidate 1 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +2

Query: 26 SRAFCLVLKFHRSPYATLSR 85
          S  FCLV   HR  Y  LS+
Sbjct: 20 SEIFCLVNFNHRESYFRLSK 39


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = +1

Query: 247 HGKKHYDAQSHQRPPGQQSSPRETVATHQGQRWLRVH 357
           H K H    + +RP   +   R+ V     +R LRVH
Sbjct: 177 HLKTHMRLHTGERPYRCEHCDRQFVQVANLRRHLRVH 213


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,733
Number of Sequences: 336
Number of extensions: 4901
Number of successful extensions: 21
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23763101
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)