Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_K14
(858 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical pr... 369 e-102
U41264-4|AAA82424.1| 220|Caenorhabditis elegans Hypothetical pr... 63 3e-10
Z82286-2|CAB05306.1| 397|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z82266-17|CAJ80813.1| 446|Caenorhabditis elegans Hypothetical p... 29 4.2
Z82266-16|CAJ80812.1| 423|Caenorhabditis elegans Hypothetical p... 29 4.2
Z68213-11|CAJ80817.1| 446|Caenorhabditis elegans Hypothetical p... 29 4.2
Z68213-10|CAJ80816.1| 423|Caenorhabditis elegans Hypothetical p... 29 4.2
Z19158-1|CAA79574.1| 788|Caenorhabditis elegans Hypothetical pr... 28 7.4
AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical ... 28 7.4
AC024849-3|AAK68547.1| 327|Caenorhabditis elegans Hypothetical ... 28 9.8
>Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical
protein F25H2.10 protein.
Length = 312
Score = 369 bits (909), Expect = e-102
Identities = 165/255 (64%), Positives = 212/255 (83%)
Frame = +2
Query: 92 REXKATWKSNYFVKXIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMR 271
RE ++TWK+NYF K ++L +EYPKC +VG DNVGS+QMQ+IR ++RG + +LMGKNTM+R
Sbjct: 3 REDRSTWKANYFTKLVELFEEYPKCLLVGVDNVGSKQMQEIRQAMRGHAEILMGKNTMIR 62
Query: 272 KAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVV 451
KA++ HL NP+LEKLLPHI NVGFVFT+ DL E+R KLLEN+ APA+ GAIAP V
Sbjct: 63 KALRGHLGKNPSLEKLLPHIVENVGFVFTKEDLGEIRSKLLENRKGAPAKAGAIAPCDVK 122
Query: 452 IPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISP 631
+P NTG+GPEKTSFFQAL IPTKI++GTIEI+NDVH++K GDKVGASE+ LLNML ++P
Sbjct: 123 LPPQNTGMGPEKTSFFQALQIPTKIARGTIEILNDVHLIKEGDKVGASESALLNMLGVTP 182
Query: 632 FSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVXALSLAIGYPTIASAPHSIA 811
FSYGLVV+QVYD GT++ PE+LD+ E+LR +F +GV NV ++SLA+ YPT+AS HS+A
Sbjct: 183 FSYGLVVRQVYDDGTLYTPEVLDMTTEELRKRFLSGVRNVASVSLAVNYPTLASVAHSLA 242
Query: 812 NGFKNLLAIAAVTXV 856
NG +N+L +AAVT V
Sbjct: 243 NGLQNMLGVAAVTDV 257
>U41264-4|AAA82424.1| 220|Caenorhabditis elegans Hypothetical
protein F10E7.5 protein.
Length = 220
Score = 62.9 bits (146), Expect = 3e-10
Identities = 50/202 (24%), Positives = 87/202 (43%), Gaps = 3/202 (1%)
Frame = +2
Query: 59 RSPYATLSRXGREXKATWKSNYFVKXIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSS 238
R +L++ ++ K T K+N + +D+Y FI N+ S + IR + +S
Sbjct: 6 RDKNVSLTKVKKKTKDT-KNNLVNEVRASVDQYKNLFIFTIANMRSTRFIAIRQKYKENS 64
Query: 239 IVLMGKNTMMRKAIKDHLDNNPA--LEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQA 412
GKN ++ A+ + A L K +KG G +FT EV + E +
Sbjct: 65 RFFFGKNNVISIALGKQKSDEYANQLHKASAILKGQCGLMFTNMSKKEVEAEFSEASEED 124
Query: 413 PARPGAIAPLSVVIP-AHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVG 589
AR G +A +VV+P + + L +PTK+ KG I + + K G+ +
Sbjct: 125 YARVGDVATETVVLPEGPISQFAFSMEPQLRKLGLPTKLDKGVITLYQQFEVCKEGEPLT 184
Query: 590 ASEATLLNMLNISPFSYGLVVK 655
+A +L + + L+ K
Sbjct: 185 VEQAKILKHFEVKMSQFRLIFK 206
>Z82286-2|CAB05306.1| 397|Caenorhabditis elegans Hypothetical
protein W02A2.3 protein.
Length = 397
Score = 29.9 bits (64), Expect = 2.4
Identities = 20/74 (27%), Positives = 29/74 (39%), Gaps = 2/74 (2%)
Frame = +3
Query: 243 CSWEKTL*CAKP-SKTTWTTIQPSRNCCHTSRATLASCSPAET-SWRSVTNCWRTKSKLQ 416
CSW P S+T + QP+ N R C+P +S W T S+
Sbjct: 273 CSWMIDPLATDPQSRTHYLQCQPAPNNLFCGRWQRMPCAPGTVFDVQSQVCVWDTNSQPG 332
Query: 417 LVPVPLPHCQSSFP 458
+P P P+ + P
Sbjct: 333 TLPTPAPYVSTQAP 346
>Z82266-17|CAJ80813.1| 446|Caenorhabditis elegans Hypothetical
protein C01F6.6d protein.
Length = 446
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +3
Query: 300 IQPSRNCCHTSRATLASCSPAETSWRSVTNCWRTKSKLQLVPVPLP 437
+ P RN CH S SP +SW + T+ ++K VP P P
Sbjct: 116 VSPMRNSCHPSNN-----SPPPSSWYAPTSYSQSKETPVFVPPPPP 156
>Z82266-16|CAJ80812.1| 423|Caenorhabditis elegans Hypothetical
protein C01F6.6c protein.
Length = 423
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +3
Query: 300 IQPSRNCCHTSRATLASCSPAETSWRSVTNCWRTKSKLQLVPVPLP 437
+ P RN CH S SP +SW + T+ ++K VP P P
Sbjct: 116 VSPMRNSCHPSNN-----SPPPSSWYAPTSYSQSKETPVFVPPPPP 156
>Z68213-11|CAJ80817.1| 446|Caenorhabditis elegans Hypothetical
protein C01F6.6d protein.
Length = 446
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +3
Query: 300 IQPSRNCCHTSRATLASCSPAETSWRSVTNCWRTKSKLQLVPVPLP 437
+ P RN CH S SP +SW + T+ ++K VP P P
Sbjct: 116 VSPMRNSCHPSNN-----SPPPSSWYAPTSYSQSKETPVFVPPPPP 156
>Z68213-10|CAJ80816.1| 423|Caenorhabditis elegans Hypothetical
protein C01F6.6c protein.
Length = 423
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +3
Query: 300 IQPSRNCCHTSRATLASCSPAETSWRSVTNCWRTKSKLQLVPVPLP 437
+ P RN CH S SP +SW + T+ ++K VP P P
Sbjct: 116 VSPMRNSCHPSNN-----SPPPSSWYAPTSYSQSKETPVFVPPPPP 156
>Z19158-1|CAA79574.1| 788|Caenorhabditis elegans Hypothetical
protein T23G5.1 protein.
Length = 788
Score = 28.3 bits (60), Expect = 7.4
Identities = 34/158 (21%), Positives = 67/158 (42%), Gaps = 5/158 (3%)
Frame = +2
Query: 104 ATWKSNYFVKXIQLLDEYP---KCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRK 274
A W + F+K ++ E+ C G D+ ++ + + V + T+ +
Sbjct: 337 ALWIPDLFMKRVEKDQEWSLMCPCECPGLDDCWGEEFEALYAKYEAEGRV---RKTVKAR 393
Query: 275 AIKDHLDNNPALEKLLPHI--KGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSV 448
+ +H+ +N +E LP+I K + +L ++ L ++ + P IA ++
Sbjct: 394 KLWEHIVSNQ-IETGLPYITYKDAANRKSNQQNLGTIKCSNLCTEIIEYSAPDEIAVCNL 452
Query: 449 VIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVH 562
A N + PEK F L+ TK+ + I DV+
Sbjct: 453 ASIALNRYVTPEKKFDFVKLAEVTKVITRNLNKIIDVN 490
>AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical
protein Y46B2A.3 protein.
Length = 1145
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -1
Query: 450 TTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVNTKPT 340
TT P AG WT+ +N ++R TR P +PT
Sbjct: 192 TTRGFTQRPTAAG-WTIRANGITRGQTRVPGTTREPT 227
>AC024849-3|AAK68547.1| 327|Caenorhabditis elegans Hypothetical
protein Y67D8B.2 protein.
Length = 327
Score = 27.9 bits (59), Expect = 9.8
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +2
Query: 389 LLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGT 538
+L +Q A A+ L+ +P TGL P + FQAL P I+ T
Sbjct: 42 VLNRYMQLEAYCDAVDDLTGALP--KTGLAPNEPDLFQALFFPRSIAPRT 89
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,019,111
Number of Sequences: 27780
Number of extensions: 465959
Number of successful extensions: 1409
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1408
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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