Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_K12
         (343 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   3.5  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   4.6  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    20   8.1  

>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 3.5
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +1

Query: 10  DYFIHRKVFRRKKGLQTHSFSIFFT 84
           DYF+ R    +   + +H   IFFT
Sbjct: 150 DYFVQRNQEYKYYQILSHLSGIFFT 174


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 20.6 bits (41), Expect = 4.6
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = +3

Query: 39  KEKRATNSFLFYIFYKACNVTLFYNLYKVIHNISET 146
           KEK     ++ Y FYK  +     + +   HN++ T
Sbjct: 421 KEKADFQYYVSYDFYKMNHPVYHKDPHYGFHNVTNT 456


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 19.8 bits (39), Expect = 8.1
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 45  FPSKHLSVNEVIGR 4
           FPS H S+N  +G+
Sbjct: 243 FPSIHNSINPFLGQ 256


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,932
Number of Sequences: 336
Number of extensions: 908
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6664455
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)