Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_K07
         (845 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    23   3.0  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   5.3  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   7.0  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 229 ALLFTCGFFSWVS 191
           AL F CGF  WV+
Sbjct: 471 ALYFDCGFAGWVT 483


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = +1

Query: 145 PSMSACHQG 171
           PS+S+CHQG
Sbjct: 133 PSVSSCHQG 141


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 774 SLANHALKS*KWKCFXLGRVFIFY 845
           SL    L S  +KC+ L R++ FY
Sbjct: 37  SLQVGILDSLVFKCYNLRRIYYFY 60


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,282
Number of Sequences: 336
Number of extensions: 4360
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23348025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)