Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_K07
         (845 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81032-2|CAD88213.1|  558|Caenorhabditis elegans Hypothetical pr...    40   0.002
Z81032-1|CAB02719.1|  535|Caenorhabditis elegans Hypothetical pr...    40   0.002
Z81032-5|CAL36491.1|  597|Caenorhabditis elegans Hypothetical pr...    38   0.009
AC006830-7|AAK68613.2|  479|Caenorhabditis elegans Hypothetical ...    28   7.3  

>Z81032-2|CAD88213.1|  558|Caenorhabditis elegans Hypothetical
           protein C02F4.2b protein.
          Length = 558

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 21/45 (46%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = +3

Query: 39  PWXALSGGKTSLKN--ALQGFSPNHKITSFAEAKGLDAINERMPP 167
           P   L GG   ++   A  G    H I SF EA+ LD INERMPP
Sbjct: 482 PMGTLQGGSRGVREVAAESGCDSGHLIQSFEEARRLDKINERMPP 526



 Score = 31.9 bits (69), Expect = 0.59
 Identities = 13/16 (81%), Positives = 15/16 (93%)
 Frame = +2

Query: 2   LQLKGLTPTGALPLGS 49
           L LKGLTPTGALP+G+
Sbjct: 470 LALKGLTPTGALPMGT 485


>Z81032-1|CAB02719.1|  535|Caenorhabditis elegans Hypothetical
           protein C02F4.2a protein.
          Length = 535

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 21/45 (46%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = +3

Query: 39  PWXALSGGKTSLKN--ALQGFSPNHKITSFAEAKGLDAINERMPP 167
           P   L GG   ++   A  G    H I SF EA+ LD INERMPP
Sbjct: 459 PMGTLQGGSRGVREVAAESGCDSGHLIQSFEEARRLDKINERMPP 503



 Score = 31.9 bits (69), Expect = 0.59
 Identities = 13/16 (81%), Positives = 15/16 (93%)
 Frame = +2

Query: 2   LQLKGLTPTGALPLGS 49
           L LKGLTPTGALP+G+
Sbjct: 447 LALKGLTPTGALPMGT 462


>Z81032-5|CAL36491.1|  597|Caenorhabditis elegans Hypothetical
           protein C02F4.2c protein.
          Length = 597

 Score = 37.9 bits (84), Expect = 0.009
 Identities = 24/52 (46%), Positives = 27/52 (51%), Gaps = 9/52 (17%)
 Frame = +3

Query: 39  PWXALSGGKTSLKNALQ---------GFSPNHKITSFAEAKGLDAINERMPP 167
           P  ALS G+T L  A +         G    H I SF EA+ LD INERMPP
Sbjct: 514 PQGALSEGRTGLNAAYRIEQSVAAESGCDSGHLIQSFEEARRLDKINERMPP 565



 Score = 31.9 bits (69), Expect = 0.59
 Identities = 13/16 (81%), Positives = 15/16 (93%)
 Frame = +2

Query: 2   LQLKGLTPTGALPLGS 49
           L LKGLTPTGALP+G+
Sbjct: 447 LALKGLTPTGALPMGT 462


>AC006830-7|AAK68613.2|  479|Caenorhabditis elegans Hypothetical
           protein ZK105.6 protein.
          Length = 479

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 18/52 (34%), Positives = 23/52 (44%)
 Frame = +1

Query: 535 LFKYCAALFNFFGNVILNFHMKRHDIVM*INSDCLLILYIVIYFSEN*TCLK 690
           LF+  A  F FF  V       + D+     S CL I YI  Y  +N  C+K
Sbjct: 4   LFRNLAIFFTFFNFVFSAPFSAKGDV-----STCLKIFYIAAYDDDNFECVK 50


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,357,051
Number of Sequences: 27780
Number of extensions: 376600
Number of successful extensions: 795
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 795
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)