Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_K05
         (599 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical pr...    31   0.83 
Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical p...    31   0.83 
Z37983-4|CAA86057.1|  803|Caenorhabditis elegans Hypothetical pr...    29   2.5  
Z75552-4|CAA99942.1|  624|Caenorhabditis elegans Hypothetical pr...    27   7.7  
U23515-13|AAK21453.1|  823|Caenorhabditis elegans Hypothetical p...    27   7.7  
AF016448-12|AAB65959.1|  316|Caenorhabditis elegans Hypothetical...    27   7.7  

>Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical protein
            H05L14.2 protein.
          Length = 2162

 Score = 30.7 bits (66), Expect = 0.83
 Identities = 16/71 (22%), Positives = 33/71 (46%)
 Frame = +2

Query: 239  DASIAVQGSSGYTAPDGTPIQITYIADANGYQPSGAHLPTTPAPVPIPDYIARAIEYIRT 418
            D   A + +S +  P+  P+ + +      Y    +++P    P+P P ++A  +++   
Sbjct: 946  DEQPASESTSAFDIPEHPPVIVPFRNAPIVYSSQTSNIPQIHPPLPPPRFLAMPMQF-SG 1004

Query: 419  HPPKPEVGQRI 451
            HPP   +G  I
Sbjct: 1005 HPPPVIMGPPI 1015


>Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical
            protein H05L14.2 protein.
          Length = 2162

 Score = 30.7 bits (66), Expect = 0.83
 Identities = 16/71 (22%), Positives = 33/71 (46%)
 Frame = +2

Query: 239  DASIAVQGSSGYTAPDGTPIQITYIADANGYQPSGAHLPTTPAPVPIPDYIARAIEYIRT 418
            D   A + +S +  P+  P+ + +      Y    +++P    P+P P ++A  +++   
Sbjct: 946  DEQPASESTSAFDIPEHPPVIVPFRNAPIVYSSQTSNIPQIHPPLPPPRFLAMPMQF-SG 1004

Query: 419  HPPKPEVGQRI 451
            HPP   +G  I
Sbjct: 1005 HPPPVIMGPPI 1015


>Z37983-4|CAA86057.1|  803|Caenorhabditis elegans Hypothetical
           protein B0393.4 protein.
          Length = 803

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = +2

Query: 332 QPSGAHLPTTPAPVPIPDYIARAIE-YIRTHPPKPEVGQR 448
           +PS    P+ P P P+P+ I   ++  +   P KP V +R
Sbjct: 47  EPSSPTRPSEPIPPPLPEPIPELVQILLAAEPNKPSVPKR 86


>Z75552-4|CAA99942.1|  624|Caenorhabditis elegans Hypothetical
           protein W04D2.4 protein.
          Length = 624

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +2

Query: 134 SQDADVFPDKYQYQYQTSNGISGQEQGALVNEGREDASI 250
           S  + VFP + +YQY+   G+   EQ  L + G  D ++
Sbjct: 558 SSSSTVFPTRSKYQYRPGKGLERAEQDYL-SRGNGDITL 595


>U23515-13|AAK21453.1|  823|Caenorhabditis elegans Hypothetical
           protein R144.2a protein.
          Length = 823

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 13/33 (39%), Positives = 14/33 (42%)
 Frame = +1

Query: 331 PAFGCPSAHYPSPCPNPRLHRPGHRVHQNSPTQ 429
           P F  P  H+P   P P     G   H NSP Q
Sbjct: 343 PPFQHPQQHHPQLPPPPVHQGMGRGYHHNSPPQ 375


>AF016448-12|AAB65959.1|  316|Caenorhabditis elegans Hypothetical
           protein F41E6.11 protein.
          Length = 316

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 13/39 (33%), Positives = 17/39 (43%)
 Frame = +2

Query: 329 YQPSGAHLPTTPAPVPIPDYIARAIEYIRTHPPKPEVGQ 445
           YQP+   +P  PAP   P Y   A   +  + P P   Q
Sbjct: 181 YQPTYCAVPPCPAPAATPVYAQPAPRPMPVYAPAPACAQ 219


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,138,853
Number of Sequences: 27780
Number of extensions: 348108
Number of successful extensions: 1145
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1052
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1140
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)