Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_K04
         (682 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73422-8|CAA97771.3|  240|Caenorhabditis elegans Hypothetical pr...    71   6e-13
Z49909-6|CAA90109.1|  214|Caenorhabditis elegans Hypothetical pr...    28   7.1  
AY303579-1|AAP57301.1|  214|Caenorhabditis elegans cell death-re...    28   7.1  

>Z73422-8|CAA97771.3|  240|Caenorhabditis elegans Hypothetical
           protein B0564.1a protein.
          Length = 240

 Score = 71.3 bits (167), Expect = 6e-13
 Identities = 43/168 (25%), Positives = 72/168 (42%)
 Frame = +2

Query: 173 ENGKRKDGRELNEARSMFARTDMVSQAKGSAYVELRKTKVVCSVFDPREIPHQNEFRQLG 352
           E+G R DGR   + R++  R  +   A+GS Y+E   TKV+C+V+ P E           
Sbjct: 6   EHGFRIDGRRPAQIRNINTRLGLNRNAEGSCYLEHGNTKVLCAVYGPYEGKSSKRIEDKC 65

Query: 353 QLYCEVKFAPFSCPRKRRPYVPDVEEKALSVALRQALEPAVCRHFFPNYQIDVLIYILEH 532
            + C+     FS   ++     D +   +S  L +A E  +    FP  Q+D+   +++ 
Sbjct: 66  AIVCQYSATKFSGLERKNRTRGDRKSTEISRLLEKAFESVILTEAFPRSQLDIFCEVIQG 125

Query: 533 DGSCXXXXXXXXXXXXXXXXVPMFDIITSCSVAVIGNKMFIDPTEIXE 676
           DGS                 +PM  I ++ +  V+  K  +D T   E
Sbjct: 126 DGSNLAACVNATSLALADAGIPMKGIASAATCGVVDGKPIVDLTSREE 173


>Z49909-6|CAA90109.1|  214|Caenorhabditis elegans Hypothetical
           protein C14A4.5 protein.
          Length = 214

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 16/82 (19%), Positives = 32/82 (39%)
 Frame = +2

Query: 419 DVEEKALSVALRQALEPAVCRHFFPNYQIDVLIYILEHDGSCXXXXXXXXXXXXXXXXVP 598
           D +   L+  +   L  A+    FP+  I V ++ ++ DGS                 +P
Sbjct: 63  DNKFNVLNNIIHSTLSNAINLELFPHTTISVTVHGIQDDGSMGAVAINGACFALLDNGMP 122

Query: 599 MFDIITSCSVAVIGNKMFIDPT 664
              +     +  + +++ IDPT
Sbjct: 123 FETVFCGVLIVRVKDELIIDPT 144


>AY303579-1|AAP57301.1|  214|Caenorhabditis elegans cell
           death-related nuclease 5 protein.
          Length = 214

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 16/82 (19%), Positives = 32/82 (39%)
 Frame = +2

Query: 419 DVEEKALSVALRQALEPAVCRHFFPNYQIDVLIYILEHDGSCXXXXXXXXXXXXXXXXVP 598
           D +   L+  +   L  A+    FP+  I V ++ ++ DGS                 +P
Sbjct: 63  DNKFNVLNNIIHSTLSNAINLELFPHTTISVTVHGIQDDGSMGAVAINGACFALLDNGMP 122

Query: 599 MFDIITSCSVAVIGNKMFIDPT 664
              +     +  + +++ IDPT
Sbjct: 123 FETVFCGVLIVRVKDELIIDPT 144


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,284,041
Number of Sequences: 27780
Number of extensions: 240289
Number of successful extensions: 493
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 488
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 493
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)