Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_J23
(549 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P61353 Cluster: 60S ribosomal protein L27; n=97; Eukary... 153 2e-36
UniRef50_P91914 Cluster: 60S ribosomal protein L27; n=14; Eukary... 140 1e-32
UniRef50_P0C2H7 Cluster: 60S ribosomal protein L27-B; n=39; Euka... 126 3e-28
UniRef50_Q4P3X4 Cluster: 60S ribosomal protein L27; n=8; Dikarya... 119 4e-26
UniRef50_Q4WJD7 Cluster: 60S ribosomal protein L27e; n=6; Pezizo... 117 2e-25
UniRef50_Q6R7S0 Cluster: 60S ribosomal protein L27; n=7; Fungi/M... 112 6e-24
UniRef50_Q86LP6 Cluster: 60S ribosomal protein L27; n=4; Trypano... 104 2e-21
UniRef50_Q55BE6 Cluster: 60S ribosomal protein L27; n=1; Dictyos... 102 5e-21
UniRef50_Q4Q504 Cluster: 60S ribosomal protein L27; n=6; Trypano... 101 8e-21
UniRef50_A0BCG5 Cluster: Chromosome undetermined scaffold_10, wh... 84 2e-15
UniRef50_A0C4W1 Cluster: 60S ribosomal protein L27; n=1; Paramec... 84 2e-15
UniRef50_Q01A00 Cluster: RL27_PEA 60S ribosomal protein L27 pir|... 82 7e-15
UniRef50_A2DNC1 Cluster: 60S ribosomal protein L27; n=3; Trichom... 81 2e-14
UniRef50_UPI00006CAB39 Cluster: hypothetical protein TTHERM_0078... 80 3e-14
UniRef50_Q5CSF1 Cluster: 60S ribosomal protein L27; n=2; Cryptos... 80 4e-14
UniRef50_UPI0000F2B958 Cluster: PREDICTED: similar to ribosomal ... 79 5e-14
UniRef50_UPI000049913D Cluster: 60S ribosomal protein L27; n=2; ... 77 3e-13
UniRef50_Q7RNR5 Cluster: 60S ribosomal protein L27 homolog; n=4;... 75 1e-12
UniRef50_Q4N659 Cluster: 60S ribosomal protein L27e, putative; n... 75 1e-12
UniRef50_Q16PM4 Cluster: 60S ribosomal protein L27; n=1; Aedes a... 75 1e-12
UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia... 63 4e-09
UniRef50_A5I8K6 Cluster: Putative uncharacterized protein; n=1; ... 57 2e-07
UniRef50_Q98SC5 Cluster: 60S ribosomal protein L27; n=1; Guillar... 50 5e-05
UniRef50_Q8SS64 Cluster: 60S RIBOSOMAL PROTEIN L27; n=1; Encepha... 40 0.029
UniRef50_UPI0000E2219F Cluster: PREDICTED: hypothetical protein;... 36 0.47
UniRef50_UPI00006D0DE1 Cluster: Leucine Rich Repeat family prote... 35 1.1
UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5; Oligohym... 35 1.1
UniRef50_UPI0000F2DDFF Cluster: PREDICTED: similar to cardiomyop... 34 1.9
UniRef50_Q5U9L9 Cluster: Putative uncharacterized protein; n=1; ... 33 3.3
UniRef50_Q0U893 Cluster: Putative uncharacterized protein; n=1; ... 33 3.3
UniRef50_UPI0000E81CEB Cluster: PREDICTED: similar to APCL prote... 33 4.4
UniRef50_Q232L0 Cluster: Putative uncharacterized protein; n=1; ... 33 4.4
UniRef50_UPI0000DB79CA Cluster: PREDICTED: similar to Mediator c... 33 5.8
UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=1... 33 5.8
UniRef50_A7L698 Cluster: 60S ribosomal protein L6; n=1; Artemia ... 33 5.8
UniRef50_A1Z9C2 Cluster: CG17050-PA; n=1; Drosophila melanogaste... 33 5.8
UniRef50_Q9MTH5 Cluster: Putative membrane protein ycf1; n=3; Oe... 33 5.8
UniRef50_P53420 Cluster: Collagen alpha-4(IV) chain precursor; n... 33 5.8
UniRef50_UPI0000ECCEB7 Cluster: UPI0000ECCEB7 related cluster; n... 32 7.6
UniRef50_Q53KY4 Cluster: Retrotransposon protein, putative, Ty3-... 32 7.6
UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2; Eukaryot... 32 7.6
UniRef50_Q6CTF3 Cluster: Similar to sgd|S0005880 Saccharomyces c... 32 7.6
UniRef50_Q8PSL5 Cluster: Putative uncharacterized protein; n=1; ... 32 7.6
>UniRef50_P61353 Cluster: 60S ribosomal protein L27; n=97;
Eukaryota|Rep: 60S ribosomal protein L27 - Homo sapiens
(Human)
Length = 136
Score = 153 bits (372), Expect = 2e-36
Identities = 73/105 (69%), Positives = 83/105 (79%), Gaps = 2/105 (1%)
Frame = +3
Query: 135 GTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSF 314
GTSD+PY HA VAGIDRYPRKV MGK KI KRSKIK FVKV NYNHLMPTRY+VD
Sbjct: 32 GTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPL 91
Query: 315 EKFSA-KDL-KDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 443
+K KD+ +DPA ++K R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 92 DKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
Score = 47.2 bits (107), Expect = 3e-04
Identities = 19/29 (65%), Positives = 27/29 (93%)
Frame = +2
Query: 41 LGKIMQPGQVVLVLSGRYAGRKAXVVKSL 127
+GK M+PG+VVLVL+GRY+GRKA +VK++
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNI 29
>UniRef50_P91914 Cluster: 60S ribosomal protein L27; n=14;
Eukaryota|Rep: 60S ribosomal protein L27 -
Caenorhabditis elegans
Length = 136
Score = 140 bits (340), Expect = 1e-32
Identities = 63/105 (60%), Positives = 81/105 (77%), Gaps = 2/105 (1%)
Frame = +3
Query: 135 GTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSF 314
G SD+ Y HA +AGIDRYP KV K MGK KI KR+K+KPF+KVV+Y HL+PTRY+VD +F
Sbjct: 32 GVSDRTYPHAIIAGIDRYPLKVTKDMGKKKIEKRNKLKPFLKVVSYTHLLPTRYSVDVAF 91
Query: 315 EK--FSAKDLKDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 443
+K + + LK P+K++K + +FEERYK+GKNKWFF KLRF
Sbjct: 92 DKTNINKEALKAPSKKRKALVEVKSKFEERYKTGKNKWFFTKLRF 136
Score = 47.2 bits (107), Expect = 3e-04
Identities = 21/27 (77%), Positives = 25/27 (92%)
Frame = +2
Query: 41 LGKIMQPGQVVLVLSGRYAGRKAXVVK 121
+GKIM+PG+VVLVL G+YAGRKA VVK
Sbjct: 1 MGKIMKPGKVVLVLRGKYAGRKAVVVK 27
>UniRef50_P0C2H7 Cluster: 60S ribosomal protein L27-B; n=39;
Eukaryota|Rep: 60S ribosomal protein L27-B -
Saccharomyces cerevisiae (Baker's yeast)
Length = 136
Score = 126 bits (304), Expect = 3e-28
Identities = 56/105 (53%), Positives = 77/105 (73%), Gaps = 2/105 (1%)
Frame = +3
Query: 135 GTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSF 314
G+ P+GHA VAGI+RYP KV K+ G K+ KR+KIKPF+KVVNYNHL+PTRYT+D
Sbjct: 32 GSKSHPFGHALVAGIERYPSKVTKKHGAKKVAKRTKIKPFIKVVNYNHLLPTRYTLDVEA 91
Query: 315 EK--FSAKDLKDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 443
K S + + P++R++ + + FEER+++GKN+WFF KLRF
Sbjct: 92 FKSVVSTETFEQPSQREEAKKVVKKAFEERHQAGKNQWFFSKLRF 136
Score = 32.7 bits (71), Expect = 5.8
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +2
Query: 41 LGKIMQPGQVVLVLSGRYAGRKAXVVK 121
+ K ++ G+V +V+ GRYAG+K +VK
Sbjct: 1 MAKFLKAGKVAVVVRGRYAGKKVVIVK 27
>UniRef50_Q4P3X4 Cluster: 60S ribosomal protein L27; n=8;
Dikarya|Rep: 60S ribosomal protein L27 - Ustilago maydis
(Smut fungus)
Length = 190
Score = 119 bits (287), Expect = 4e-26
Identities = 55/105 (52%), Positives = 73/105 (69%), Gaps = 2/105 (1%)
Frame = +3
Query: 135 GTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSF 314
G+ DK + + AGI+RYP+KV KRMG KI KRSK+KPFVKV++YNHLMPTRY ++
Sbjct: 86 GSKDKSFPYIIAAGIERYPQKVTKRMGAKKIAKRSKVKPFVKVISYNHLMPTRYALELEG 145
Query: 315 EK--FSAKDLKDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 443
K + K+P++R+ + + FEE+Y SGKNKWFF LRF
Sbjct: 146 LKGAVTQDTFKEPSQREDAKKQIKQIFEEKYTSGKNKWFFTPLRF 190
>UniRef50_Q4WJD7 Cluster: 60S ribosomal protein L27e; n=6;
Pezizomycotina|Rep: 60S ribosomal protein L27e -
Aspergillus fumigatus (Sartorya fumigata)
Length = 186
Score = 117 bits (281), Expect = 2e-25
Identities = 53/105 (50%), Positives = 72/105 (68%), Gaps = 2/105 (1%)
Frame = +3
Query: 135 GTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSF 314
G+ P+ +A VAGI+RYP KV +RMGK + KRS+IKPF+K+VNYNHLMPTRYT++
Sbjct: 82 GSKAHPFPYAIVAGIERYPLKVTRRMGKKMVEKRSRIKPFIKIVNYNHLMPTRYTLELEG 141
Query: 315 EK--FSAKDLKDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 443
K S + K+ + R+ + + E+RY SGKN+WFF LRF
Sbjct: 142 LKGAISQETFKEVSTREDAKKTVKKALEDRYTSGKNRWFFTPLRF 186
Score = 32.3 bits (70), Expect = 7.6
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +2
Query: 17 RQGHLP--PSLGKIMQPGQVVLVLSGRYAGRKAXVVK 121
+Q H P P K M+ G+V ++ GRYAG+K +V+
Sbjct: 41 QQPHRPCAPLTMKFMKVGRVAIITRGRYAGKKVVIVQ 77
>UniRef50_Q6R7S0 Cluster: 60S ribosomal protein L27; n=7;
Fungi/Metazoa group|Rep: 60S ribosomal protein L27 -
Pectinaria gouldii (Trumpet worm) (Ice-cream cone worm)
Length = 138
Score = 112 bits (269), Expect = 6e-24
Identities = 54/110 (49%), Positives = 71/110 (64%), Gaps = 4/110 (3%)
Frame = +3
Query: 126 YAXGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVD 305
Y GTS++PY HAFV GIDRYPRKV MGK K +R+++K F K +NYNHLM TRY+V
Sbjct: 29 YDSGTSERPYAHAFVVGIDRYPRKVTATMGKKKFERRTRVKAFAKFINYNHLMFTRYSVQ 88
Query: 306 -FSFEK---FSAKDLKDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 443
F +K F K+ + RK+ + + ER+ + KN+WFF KLRF
Sbjct: 89 LFPEDKAKTFGPDRWKNFSDRKEFKKELQTVMRERFLAAKNRWFFTKLRF 138
Score = 35.5 bits (78), Expect = 0.82
Identities = 14/27 (51%), Positives = 22/27 (81%)
Frame = +2
Query: 41 LGKIMQPGQVVLVLSGRYAGRKAXVVK 121
+GK ++P +V LVL+GR+AG+K V+K
Sbjct: 1 MGKFVKPDRVALVLNGRHAGKKVVVMK 27
>UniRef50_Q86LP6 Cluster: 60S ribosomal protein L27; n=4;
Trypanosomatidae|Rep: 60S ribosomal protein L27 -
Leishmania major
Length = 133
Score = 104 bits (249), Expect = 2e-21
Identities = 42/102 (41%), Positives = 69/102 (67%)
Frame = +3
Query: 138 TSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFE 317
+ ++PYGH+ +AG+ +YP+KV + M K I +RS++ F++VVN+ H +PTRY +D S E
Sbjct: 32 SKERPYGHSLIAGMKKYPKKVVRGMSKRTIQRRSRVGVFLRVVNHKHFLPTRYNMDLSRE 91
Query: 318 KFSAKDLKDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 443
++ D +K+ + + R F+ RY +G N+WFFQ+LRF
Sbjct: 92 LRGRINVSDASKKARSKQLVRKLFQARYNAGSNRWFFQRLRF 133
Score = 38.7 bits (86), Expect = 0.088
Identities = 15/26 (57%), Positives = 23/26 (88%)
Frame = +2
Query: 47 KIMQPGQVVLVLSGRYAGRKAXVVKS 124
K ++PG+VV+V SGRYAG+KA +V++
Sbjct: 2 KFLKPGKVVIVTSGRYAGKKAVIVQN 27
>UniRef50_Q55BE6 Cluster: 60S ribosomal protein L27; n=1;
Dictyostelium discoideum AX4|Rep: 60S ribosomal protein
L27 - Dictyostelium discoideum AX4
Length = 144
Score = 102 bits (245), Expect = 5e-21
Identities = 51/112 (45%), Positives = 68/112 (60%), Gaps = 7/112 (6%)
Frame = +3
Query: 129 AXGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDF 308
A + +PYGH VAGID+YPR + + M + I KR+ I+ FVKVVNYNH+MPTRY +
Sbjct: 33 ATASKSRPYGHCLVAGIDKYPRSIVRSMSRKTILKRTAIRSFVKVVNYNHIMPTRYNFEG 92
Query: 309 SFEK-FS------AKDLKDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 443
E F+ + AKR R + FE ++K+GK+KWFF KLRF
Sbjct: 93 RDESAFTGLKNTVTVESSQVAKRAHTRLAVKKIFEAKHKAGKSKWFFSKLRF 144
Score = 38.3 bits (85), Expect = 0.12
Identities = 14/26 (53%), Positives = 24/26 (92%)
Frame = +2
Query: 47 KIMQPGQVVLVLSGRYAGRKAXVVKS 124
K ++PG++V++L+G+YAGRKA V+K+
Sbjct: 4 KFIKPGRLVILLNGKYAGRKAVVIKT 29
>UniRef50_Q4Q504 Cluster: 60S ribosomal protein L27; n=6;
Trypanosomatidae|Rep: 60S ribosomal protein L27 -
Leishmania major
Length = 134
Score = 101 bits (243), Expect = 8e-21
Identities = 45/102 (44%), Positives = 67/102 (65%)
Frame = +3
Query: 138 TSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFE 317
T ++PYG A +AGI +YP+KV + M K I +RS++ F++VVN+ H +PTRY VD S E
Sbjct: 33 TKERPYGRALLAGIKKYPKKVVRGMSKQTIARRSQVGVFLRVVNHKHFLPTRYNVDMSKE 92
Query: 318 KFSAKDLKDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 443
++ D +KR + + R F+ RY +G + WFFQ+LRF
Sbjct: 93 LRGKINVSDASKRSRSKRLVRHVFQARYNAGSSMWFFQRLRF 134
Score = 37.1 bits (82), Expect = 0.27
Identities = 18/51 (35%), Positives = 35/51 (68%), Gaps = 4/51 (7%)
Frame = +2
Query: 47 KIMQPGQVVLVLSGRYAGRKAXVVKS----LRRRYLRQAIRACLRRWYRQV 187
K ++PG+VV+V +GRYAG KA +V++ + R +A+ A ++++ ++V
Sbjct: 3 KFLKPGKVVIVTAGRYAGHKAVIVQNSDVVTKERPYGRALLAGIKKYPKKV 53
>UniRef50_A0BCG5 Cluster: Chromosome undetermined scaffold_10, whole
genome shotgun sequence; n=8; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_10, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 1051
Score = 84.2 bits (199), Expect = 2e-15
Identities = 48/120 (40%), Positives = 68/120 (56%), Gaps = 18/120 (15%)
Frame = +3
Query: 138 TSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFS-- 311
T D + + V GI RYPRKV KRMG+ +I KR+ +K F+K +N NH+MPTRY ++ S
Sbjct: 932 TKDCKFPNGLVVGIQRYPRKVTKRMGQKQIRKRTTLKVFIKQLNLNHIMPTRYRLEESTL 991
Query: 312 ------FEKFSAKDLKDPAKRKKLRFNTRVRFEERY----------KSGKNKWFFQKLRF 443
E+ +LK+ KRK+LR N R E+Y K ++++ F KLRF
Sbjct: 992 KEVRDRIERVKESELKNVEKRKELRKNLRKYLAEKYRTLPAGSLADKKAQSRFLFSKLRF 1051
Score = 39.9 bits (89), Expect = 0.038
Identities = 13/28 (46%), Positives = 26/28 (92%)
Frame = +2
Query: 41 LGKIMQPGQVVLVLSGRYAGRKAXVVKS 124
+GK ++PG+++++L+GRYAG+KA ++K+
Sbjct: 900 MGKFLKPGRLIVLLAGRYAGKKAILIKA 927
>UniRef50_A0C4W1 Cluster: 60S ribosomal protein L27; n=1; Paramecium
tetraurelia|Rep: 60S ribosomal protein L27 - Paramecium
tetraurelia
Length = 262
Score = 83.8 bits (198), Expect = 2e-15
Identities = 48/120 (40%), Positives = 67/120 (55%), Gaps = 18/120 (15%)
Frame = +3
Query: 138 TSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFS-- 311
T D + + V GI RYPRKV KRMG+ +I KR+ +K F+K +N NH+MPTRY ++ S
Sbjct: 143 TKDAKFPNGLVVGIQRYPRKVTKRMGQKQIRKRTTLKVFIKQLNLNHIMPTRYRLEESTL 202
Query: 312 ------FEKFSAKDLKDPAKRKKLRFNTRVRFEERY----------KSGKNKWFFQKLRF 443
E+ +LK+ KRK LR N R E+Y K ++++ F KLRF
Sbjct: 203 KEVRDRIERVKEAELKNVEKRKDLRKNLRKYLAEKYRTLPAGSLADKKAQSRFLFSKLRF 262
>UniRef50_Q01A00 Cluster: RL27_PEA 60S ribosomal protein L27
pir||T06451 ribosomal protein L27- garden pea; n=1;
Ostreococcus tauri|Rep: RL27_PEA 60S ribosomal protein
L27 pir||T06451 ribosomal protein L27- garden pea -
Ostreococcus tauri
Length = 184
Score = 82.2 bits (194), Expect = 7e-15
Identities = 38/84 (45%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Frame = +3
Query: 195 KVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRK-KLRF 371
+V K+M + K KRSK K F+K +NY+HLMPTRYT+D +F+ D+ D A +K +
Sbjct: 101 QVTKKMDEKKQAKRSKCKTFIKNINYSHLMPTRYTLDVNFKDVVTSDVLDNATKKVAAQK 160
Query: 372 NTRVRFEERYKSGKNKWFFQKLRF 443
+ EER+K+GK++WFF +L F
Sbjct: 161 EAKKLLEERFKTGKSRWFFTRLAF 184
Score = 39.9 bits (89), Expect = 0.038
Identities = 16/24 (66%), Positives = 23/24 (95%)
Frame = +2
Query: 56 QPGQVVLVLSGRYAGRKAXVVKSL 127
QPG+VV+VL+GRYAG+KA +VK++
Sbjct: 24 QPGKVVVVLAGRYAGKKAVIVKNV 47
Score = 37.9 bits (84), Expect = 0.15
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = +3
Query: 135 GTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSF 314
G S PYGHA V G+ PRKV +N +H+ ++ PF ++ R +V F
Sbjct: 50 GNSAHPYGHALVCGLSTIPRKV-----RNDLHRCARTAPF----GCTEILTAR-SVAFEN 99
Query: 315 EKFSAK-DLKDPAKRKKLR 368
+ + K D K AKR K +
Sbjct: 100 AQVTKKMDEKKQAKRSKCK 118
>UniRef50_A2DNC1 Cluster: 60S ribosomal protein L27; n=3;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L27
- Trichomonas vaginalis G3
Length = 139
Score = 80.6 bits (190), Expect = 2e-14
Identities = 44/113 (38%), Positives = 66/113 (58%), Gaps = 7/113 (6%)
Frame = +3
Query: 126 YAXGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTV- 302
Y GT D+ + +A V GI++YP+KV K M + K++++K FVK VN+NH+M TR+ V
Sbjct: 28 YPEGTEDRKFPYAIVMGIEKYPKKVTKDMPTEVLVKKTQVKLFVKAVNFNHVMLTRHNVK 87
Query: 303 --DFSFEKFSAKD----LKDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 443
DF F+K S + LKD +K L ++Y + K WFF+ L+F
Sbjct: 88 DEDF-FKKISVEKVVAALKDAPAKKALLTEYAAVLRQKYLNNKMAWFFKPLQF 139
>UniRef50_UPI00006CAB39 Cluster: hypothetical protein
TTHERM_00780960; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00780960 - Tetrahymena
thermophila SB210
Length = 128
Score = 80.2 bits (189), Expect = 3e-14
Identities = 32/53 (60%), Positives = 41/53 (77%)
Frame = +3
Query: 135 GTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTR 293
GT D+ +GH VAG++R P+KV KRMG KI KR+ +KPF+K VN NH+MPTR
Sbjct: 47 GTKDRKFGHVLVAGVERSPKKVTKRMGSKKIQKRTSVKPFIKYVNLNHIMPTR 99
Score = 36.3 bits (80), Expect = 0.47
Identities = 15/29 (51%), Positives = 24/29 (82%)
Frame = +2
Query: 38 SLGKIMQPGQVVLVLSGRYAGRKAXVVKS 124
S G+ ++ G+VV++L GR+AG+KA +VKS
Sbjct: 15 SFGRGLKYGRVVILLQGRFAGKKAVIVKS 43
>UniRef50_Q5CSF1 Cluster: 60S ribosomal protein L27; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L27 -
Cryptosporidium parvum Iowa II
Length = 162
Score = 79.8 bits (188), Expect = 4e-14
Identities = 46/117 (39%), Positives = 71/117 (60%), Gaps = 11/117 (9%)
Frame = +3
Query: 126 YAXGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTV- 302
+ GT D+P+ VAG+++ P KVHKR+ K K+ K+S IKPF+K +N NH+MPTRY V
Sbjct: 46 FESGTKDRPFPFVLVAGVEKAPLKVHKRLSKEKLKKKSTIKPFLKSINMNHVMPTRYVVS 105
Query: 303 DFSFEK-FSAKDLKDPAKRKK------LRFNTR-VRFE-ERYKSGKNKWFFQK-LRF 443
DF + D+++ +K+ L FN + + + E+ K+ K+ F +K LRF
Sbjct: 106 DFDIKPLLQGIDMQEADGKKQALRALHLAFNDKLINIQSEKGKAPKDLIFLRKPLRF 162
Score = 37.5 bits (83), Expect = 0.20
Identities = 15/28 (53%), Positives = 24/28 (85%)
Frame = +2
Query: 41 LGKIMQPGQVVLVLSGRYAGRKAXVVKS 124
+ K+M+ G+VV++L+GRYAG+KA VV +
Sbjct: 18 MAKLMKQGRVVVLLNGRYAGKKAVVVNT 45
>UniRef50_UPI0000F2B958 Cluster: PREDICTED: similar to ribosomal
protein L27; n=1; Monodelphis domestica|Rep: PREDICTED:
similar to ribosomal protein L27 - Monodelphis domestica
Length = 124
Score = 79.4 bits (187), Expect = 5e-14
Identities = 40/62 (64%), Positives = 44/62 (70%)
Frame = +3
Query: 135 GTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSF 314
GTSDK Y HA VAGID YPRK+ +GK KI KRSKIK FV V NYNHL RY+VD
Sbjct: 17 GTSDKSYSHAQVAGIDLYPRKLTAALGK-KISKRSKIKFFVAVYNYNHLKSIRYSVDIPL 75
Query: 315 EK 320
+K
Sbjct: 76 DK 77
>UniRef50_UPI000049913D Cluster: 60S ribosomal protein L27; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L27 - Entamoeba histolytica HM-1:IMSS
Length = 139
Score = 77.0 bits (181), Expect = 3e-13
Identities = 43/116 (37%), Positives = 63/116 (54%), Gaps = 7/116 (6%)
Frame = +3
Query: 117 SSHYAXGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRY 296
SS GT D+ YG V G++R P K+ ++M R+ +K F KV+N NH+MPT+Y
Sbjct: 26 SSVNLQGTKDRKYGFVTVVGVERAPLKITRKMSAKVQEMRTSVKSFCKVINVNHVMPTKY 85
Query: 297 TVDFSFEKFS-AKDLK----DPAKRKKLRFNTRV--RFEERYKSGKNKWFFQKLRF 443
TV + E+F+ K +K + K + + +F E Y+ GK W F KLRF
Sbjct: 86 TV--NLEQFNLIKQVKINNFEAGKVYPISQKKAISSQFAEEYRKGKESWLFTKLRF 139
Score = 38.3 bits (85), Expect = 0.12
Identities = 15/25 (60%), Positives = 22/25 (88%)
Frame = +2
Query: 41 LGKIMQPGQVVLVLSGRYAGRKAXV 115
+ KI+ PG+VV++LSGR+AG+KA V
Sbjct: 1 MSKILAPGRVVIILSGRFAGKKAVV 25
>UniRef50_Q7RNR5 Cluster: 60S ribosomal protein L27 homolog; n=4;
Plasmodium|Rep: 60S ribosomal protein L27 homolog -
Plasmodium yoelii yoelii
Length = 181
Score = 74.9 bits (176), Expect = 1e-12
Identities = 31/57 (54%), Positives = 42/57 (73%)
Frame = +3
Query: 126 YAXGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRY 296
Y T ++PY + VAGI+++P KV K+M K KI KRSK+K FVK +N NH++PTRY
Sbjct: 121 YEGQTRERPYSYCLVAGIEKHPLKVTKKMSKGKIIKRSKVKAFVKYINVNHILPTRY 177
Score = 33.1 bits (72), Expect = 4.4
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = +2
Query: 53 MQPGQVVLVLSGRYAGRKAXVVKSLRRRYLRQAIRACL 166
++PG+VV++L+GR AG+KA ++ + + + CL
Sbjct: 97 LKPGKVVIMLNGRRAGKKAIIINTYEGQTRERPYSYCL 134
>UniRef50_Q4N659 Cluster: 60S ribosomal protein L27e, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L27e, putative -
Theileria parva
Length = 148
Score = 74.9 bits (176), Expect = 1e-12
Identities = 37/93 (39%), Positives = 57/93 (61%), Gaps = 3/93 (3%)
Frame = +3
Query: 147 KPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEK-- 320
+PY + VAG+++ P KV K+M KI KR K+K FVK VN NHLMPTRY V + +
Sbjct: 36 RPYLNCLVAGVEKAPMKVTKKMSSKKIEKRLKLKAFVKYVNVNHLMPTRYMVTTTLDPKS 95
Query: 321 -FSAKDLKDPAKRKKLRFNTRVRFEERYKSGKN 416
S + +++ + RK+ R + + EE + + +N
Sbjct: 96 LVSDEQMENKSSRKEARKSVKAVLEECFSNPEN 128
Score = 40.3 bits (90), Expect = 0.029
Identities = 22/71 (30%), Positives = 41/71 (57%)
Frame = +2
Query: 41 LGKIMQPGQVVLVLSGRYAGRKAXVVKSLRRRYLRQAIRACLRRWYRQVPPESAQEDGKE 220
+GK+++PG+VV++LSGR AG KA VV++ ++ CL + P + ++ +
Sbjct: 1 MGKLLKPGRVVILLSGRRAGCKAVVVQTNESSSKKRPYLNCLVAGVEKAPMKVTKKMSSK 60
Query: 221 *NPQEVQDKAF 253
+ ++ KAF
Sbjct: 61 KIEKRLKLKAF 71
>UniRef50_Q16PM4 Cluster: 60S ribosomal protein L27; n=1; Aedes
aegypti|Rep: 60S ribosomal protein L27 - Aedes aegypti
(Yellowfever mosquito)
Length = 98
Score = 74.9 bits (176), Expect = 1e-12
Identities = 31/42 (73%), Positives = 37/42 (88%)
Frame = +3
Query: 135 GTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVK 260
GTSDK +GHA VAGIDRYPR+V +RM K ++HKRSKIKPF+K
Sbjct: 32 GTSDKQFGHALVAGIDRYPRRVTRRMNKTRLHKRSKIKPFIK 73
Score = 44.4 bits (100), Expect = 0.002
Identities = 19/28 (67%), Positives = 25/28 (89%)
Frame = +2
Query: 41 LGKIMQPGQVVLVLSGRYAGRKAXVVKS 124
+GKIM+ G+VVLVL GRYAGRKA ++K+
Sbjct: 1 MGKIMKTGKVVLVLGGRYAGRKAIILKT 28
>UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia
lamblia ATCC 50803|Rep: 60S ribosomal protein L27 -
Giardia lamblia ATCC 50803
Length = 135
Score = 63.3 bits (147), Expect = 4e-09
Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Frame = +3
Query: 159 HAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKF-SAKD 335
+A VAGI PR++ M + R +++ FVK +N NHLMPT ++ +++ F S +
Sbjct: 38 YAIVAGIAALPRRITNSMSDEEAVCRGRVRSFVKCMNVNHLMPTSCRLENNYKDFISTQT 97
Query: 336 LKDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKL 437
+ D KR+++ F+ R ++ WFF KL
Sbjct: 98 VADVTKRREIIETVNKDFQRRILEHRDTWFFTKL 131
Score = 34.7 bits (76), Expect = 1.4
Identities = 14/26 (53%), Positives = 22/26 (84%)
Frame = +2
Query: 50 IMQPGQVVLVLSGRYAGRKAXVVKSL 127
I++PG V +VL GR+AG+KA +V++L
Sbjct: 5 IIKPGLVCIVLQGRHAGKKAVIVEAL 30
>UniRef50_A5I8K6 Cluster: Putative uncharacterized protein; n=1;
Tribolium castaneum|Rep: Putative uncharacterized
protein - Tribolium castaneum (Red flour beetle)
Length = 95
Score = 57.2 bits (132), Expect = 2e-07
Identities = 31/77 (40%), Positives = 43/77 (55%)
Frame = +3
Query: 213 GKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRFNTRVRFE 392
G+ + +R + +P V + H+ P S K K P KRK++RF TRV+ +
Sbjct: 19 GRGQNTQRVQNQPLVIGCDEKHVSPHVIGGITSGGPIPTKSSKYPIKRKRVRFQTRVKVQ 78
Query: 393 ERYKSGKNKWFFQKLRF 443
E KSG+NKWFFQK RF
Sbjct: 79 EGSKSGRNKWFFQKGRF 95
>UniRef50_Q98SC5 Cluster: 60S ribosomal protein L27; n=1; Guillardia
theta|Rep: 60S ribosomal protein L27 - Guillardia theta
(Cryptomonas phi)
Length = 144
Score = 49.6 bits (113), Expect = 5e-05
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 12/104 (11%)
Frame = +3
Query: 168 VAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVD-----------FSF 314
+ GI + +K+ M K KI + K F+K +N H+ PTRY ++ +
Sbjct: 41 ILGIKKEMKKIKYNMSKRKIISNLRFKTFIKTINIKHVFPTRYVIETDDVFKTLIDAYYT 100
Query: 315 EKFSAKDLKDPAKRKKLRF-NTRVRFEERYKSGKNKWFFQKLRF 443
K K + ++ K+ + ++R GKN WFF+K++F
Sbjct: 101 NKLGNKLNEHTNEKAKVNLVSINNYLQDRLLRGKNLWFFKKMKF 144
Score = 35.5 bits (78), Expect = 0.82
Identities = 15/25 (60%), Positives = 22/25 (88%)
Frame = +2
Query: 50 IMQPGQVVLVLSGRYAGRKAXVVKS 124
I + G+VV+VLSG+YAG+KA V+K+
Sbjct: 4 IYKTGRVVIVLSGKYAGKKAFVLKN 28
>UniRef50_Q8SS64 Cluster: 60S RIBOSOMAL PROTEIN L27; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L27
- Encephalitozoon cuniculi
Length = 126
Score = 40.3 bits (90), Expect = 0.029
Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
Frame = +3
Query: 159 HAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDL 338
+ A + R P++ K + +K +K N HL+ TRY D +
Sbjct: 31 YVLTACVVRIPKEPEDHQPKWIKRRNAKFYIILKKYNIAHLIATRYKADLGLATIDYSGI 90
Query: 339 KDPAKRKKLRFN-TRVRFEERYKSGKNKWFFQKLRF 443
+D A+ KK+ N T+ + +K K K+ F L F
Sbjct: 91 EDNAETKKVLTNKTKDAMMKAWKENKAKFLFSSLSF 126
Score = 34.3 bits (75), Expect = 1.9
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +2
Query: 59 PGQVVLVLSGRYAGRKAXVVKSLRRRYLRQAIRACLRR 172
P +V+V SG+ AG+KA V+K + RY+ + AC+ R
Sbjct: 5 PNMIVVVTSGKNAGKKAVVIKQIDERYV---LTACVVR 39
>UniRef50_UPI0000E2219F Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 446
Score = 36.3 bits (80), Expect = 0.47
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 106 GXRSQVITPXVPPTSHTGMPSSLVSTGTP 192
G R ITP +PP +H+ P LV+TG P
Sbjct: 212 GDRGSAITPVIPPPAHSPCPQPLVTTGLP 240
>UniRef50_UPI00006D0DE1 Cluster: Leucine Rich Repeat family protein;
n=1; Tetrahymena thermophila SB210|Rep: Leucine Rich
Repeat family protein - Tetrahymena thermophila SB210
Length = 4758
Score = 35.1 bits (77), Expect = 1.1
Identities = 22/74 (29%), Positives = 34/74 (45%)
Frame = -2
Query: 359 LTFSRVFQVFCAEFFKAEVNCITCWHQVIIVYNLDERLYLGPLVDFILSHPLVHFPGVPV 180
L F F VF F + +C + VI+ NLD+ LYL ++ + L +
Sbjct: 107 LLFDSCFYVFDTNFQQIFNDCSQLFDDVIVQANLDKSLYLLSVIASFQNIQLSQVVDISF 166
Query: 179 DTSDEGMPVWLVGG 138
TSD +++VGG
Sbjct: 167 VTSDPNDNIYVVGG 180
>UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5;
Oligohymenophorea|Rep: 60S ribosomal protein L6 -
Paramecium tetraurelia
Length = 208
Score = 35.1 bits (77), Expect = 1.1
Identities = 16/38 (42%), Positives = 27/38 (71%)
Frame = +2
Query: 17 RQGHLPPSLGKIMQPGQVVLVLSGRYAGRKAXVVKSLR 130
R+ P +L KI+ PGQV+++LSGR+ G++ +K L+
Sbjct: 47 RKAPRPATLRKIV-PGQVLILLSGRFQGKRVVFLKQLK 83
>UniRef50_UPI0000F2DDFF Cluster: PREDICTED: similar to cardiomyopathy
associated 1,; n=1; Monodelphis domestica|Rep: PREDICTED:
similar to cardiomyopathy associated 1, - Monodelphis
domestica
Length = 1802
Score = 34.3 bits (75), Expect = 1.9
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +1
Query: 46 QNHAAGSSRAGPKWPVRGSQ-GXRSQVITPXVPPTSHTGMPSSLVSTGTPGK 198
Q +A ++R P P + + G + ++ P +PP H +PSS V TG PG+
Sbjct: 1281 QETSAMAARKKPALPPKPAHLGGPAPILPPQLPP-KHPALPSSPVGTGAPGE 1331
>UniRef50_Q5U9L9 Cluster: Putative uncharacterized protein; n=1;
Nocardioides sp. JS614|Rep: Putative uncharacterized
protein - Nocardioides sp. (strain BAA-499 / JS614)
Length = 175
Score = 33.5 bits (73), Expect = 3.3
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 73 AGPKWPVRGSQGXRSQVITPXVPPTSHTGMPSSLVSTGTP 192
AGP+WP R ++ RS+ P PP P+S +T P
Sbjct: 12 AGPRWPARSTRAWRSRTTGP--PPPRCCNRPTSKATTSAP 49
>UniRef50_Q0U893 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 385
Score = 33.5 bits (73), Expect = 3.3
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +1
Query: 88 PVRGSQGXRSQVITPXVPPTSHTGMPSSLVSTGTPGKCTRGW 213
P R G + Q++ P PP+ T +PSS++ST G G+
Sbjct: 260 PARADSG-KHQMLAPSTPPSKQTPLPSSMMSTPGGGAAYAGF 300
>UniRef50_UPI0000E81CEB Cluster: PREDICTED: similar to APCL protein,
partial; n=1; Gallus gallus|Rep: PREDICTED: similar to
APCL protein, partial - Gallus gallus
Length = 353
Score = 33.1 bits (72), Expect = 4.4
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +1
Query: 13 NASRASPSKSGQNHAAGSSRAGPKWPVRGSQGXRSQVITPXVPPTSHTGMPSS 171
+A+ PS + + A GSSR P P RG++G R Q + P +G P +
Sbjct: 271 SAAPTRPSSACRGRA-GSSRDSPVPPGRGAEGKRGQPMAGTEPDVGRSGSPGT 322
>UniRef50_Q232L0 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 189
Score = 33.1 bits (72), Expect = 4.4
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +3
Query: 165 FVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKD 344
F+ I ++ +K KR ++ HKR + + N+N L T VD+ EK + +
Sbjct: 3 FLPEIQQFQQKQAKRKSQSSNHKRF----LIIIYNFNRLYLTEIEVDYKNEKITCSIFDE 58
Query: 345 PAKRKK 362
A RK+
Sbjct: 59 MASRKQ 64
>UniRef50_UPI0000DB79CA Cluster: PREDICTED: similar to Mediator
complex subunit 1 CG7162-PA; n=1; Apis mellifera|Rep:
PREDICTED: similar to Mediator complex subunit 1
CG7162-PA - Apis mellifera
Length = 1811
Score = 32.7 bits (71), Expect = 5.8
Identities = 21/64 (32%), Positives = 28/64 (43%)
Frame = +1
Query: 7 SVNASRASPSKSGQNHAAGSSRAGPKWPVRGSQGXRSQVITPXVPPTSHTGMPSSLVSTG 186
++N +R SKSG N SS A S S I+ P +HTG+ VS+G
Sbjct: 1183 TINKTRTKDSKSGTNLKLSSSSASVATGTSSSSSTSSTNISGNSSPKTHTGLKPG-VSSG 1241
Query: 187 TPGK 198
K
Sbjct: 1242 PASK 1245
>UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=11;
Trypanosomatidae|Rep: 60S ribosomal protein L6, putative
- Leishmania major
Length = 195
Score = 32.7 bits (71), Expect = 5.8
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +2
Query: 38 SLGKIMQPGQVVLVLSGRYAGRKAXVVKSL 127
+L K PG + ++L+GR+ GR+A ++K L
Sbjct: 28 TLRKSCAPGAIAIILAGRFRGRRAVILKQL 57
>UniRef50_A7L698 Cluster: 60S ribosomal protein L6; n=1; Artemia
franciscana|Rep: 60S ribosomal protein L6 - Artemia
sanfranciscana (Brine shrimp) (Artemia franciscana)
Length = 241
Score = 32.7 bits (71), Expect = 5.8
Identities = 11/33 (33%), Positives = 24/33 (72%)
Frame = +2
Query: 32 PPSLGKIMQPGQVVLVLSGRYAGRKAXVVKSLR 130
PP + K +QPG ++++L+G G++ ++K+L+
Sbjct: 88 PPKIRKSLQPGTILILLAGVNRGKRVVLLKALK 120
>UniRef50_A1Z9C2 Cluster: CG17050-PA; n=1; Drosophila
melanogaster|Rep: CG17050-PA - Drosophila melanogaster
(Fruit fly)
Length = 506
Score = 32.7 bits (71), Expect = 5.8
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +3
Query: 285 PTRYTVDFSFEKFSAKDLKDPAKRKKLRF 371
P Y +F FE+F KDL+ AK K L+F
Sbjct: 60 PKPYVKEFEFERFHLKDLRSDAKFKHLQF 88
>UniRef50_Q9MTH5 Cluster: Putative membrane protein ycf1; n=3;
Oenothera|Rep: Putative membrane protein ycf1 - Oenothera
hookeri (Hooker's evening primrose)
Length = 2434
Score = 32.7 bits (71), Expect = 5.8
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +3
Query: 276 HLMPTRYTVDFS-FEKFSAKDLKDPAKRKKLRFNTRVRFEERYKSGKNKW 422
HL RY + + +F K+LKD + ++L F+++++ + SGKN+W
Sbjct: 1628 HLDKLRYVLQYDGTSRFLKKELKDYFEAQEL-FHSKLKHKNSLNSGKNQW 1676
>UniRef50_P53420 Cluster: Collagen alpha-4(IV) chain precursor;
n=36; Euteleostomi|Rep: Collagen alpha-4(IV) chain
precursor - Homo sapiens (Human)
Length = 1690
Score = 32.7 bits (71), Expect = 5.8
Identities = 23/61 (37%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
Frame = +1
Query: 61 GSSRAGPKWPVRGSQGXRSQVITPXVPPTSHTGMPSSLVSTGTPG-KCTRGWERIKSTRG 237
GSS GP P GS G Q P P H G P +G PG K RG G
Sbjct: 737 GSSPVGPPGPP-GSPGVNGQKGIPGDPAFGHLGPPGKRGLSGVPGIKGPRGDPGCPGAEG 795
Query: 238 P 240
P
Sbjct: 796 P 796
>UniRef50_UPI0000ECCEB7 Cluster: UPI0000ECCEB7 related cluster; n=1;
Gallus gallus|Rep: UPI0000ECCEB7 UniRef100 entry -
Gallus gallus
Length = 75
Score = 32.3 bits (70), Expect = 7.6
Identities = 18/63 (28%), Positives = 33/63 (52%)
Frame = +3
Query: 210 MGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRFNTRVRF 389
+GK K K+ K K + + HL+ ++ T + +K + LK K+K +F+ + +
Sbjct: 1 VGKKKKEKKKKKKENYRNILEAHLLKSKQTNKQTNKKHPSFTLKKKKKKKAFKFSGKFKS 60
Query: 390 EER 398
EER
Sbjct: 61 EER 63
>UniRef50_Q53KY4 Cluster: Retrotransposon protein, putative,
Ty3-gypsy sub-class; n=7; Oryza sativa (japonica
cultivar-group)|Rep: Retrotransposon protein, putative,
Ty3-gypsy sub-class - Oryza sativa subsp. japonica
(Rice)
Length = 1333
Score = 32.3 bits (70), Expect = 7.6
Identities = 16/26 (61%), Positives = 18/26 (69%)
Frame = -3
Query: 385 RTRVLKRSFLRLAGSFRSFALNFSKL 308
RT L RSFL LAG +R F NFSK+
Sbjct: 760 RTVTLVRSFLGLAGYYRRFIENFSKI 785
>UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2;
Eukaryota|Rep: 60S ribosomal protein L6 - Dictyostelium
discoideum AX4
Length = 236
Score = 32.3 bits (70), Expect = 7.6
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +2
Query: 38 SLGKIMQPGQVVLVLSGRYAGRKAXVVKSL 127
+L K + PG V+++L+GR+AG++ +K L
Sbjct: 86 ALRKSITPGTVLIILAGRFAGKRVVALKQL 115
>UniRef50_Q6CTF3 Cluster: Similar to sgd|S0005880 Saccharomyces
cerevisiae YOR353c; n=1; Kluyveromyces lactis|Rep:
Similar to sgd|S0005880 Saccharomyces cerevisiae YOR353c
- Kluyveromyces lactis (Yeast) (Candida sphaerica)
Length = 792
Score = 32.3 bits (70), Expect = 7.6
Identities = 21/62 (33%), Positives = 27/62 (43%)
Frame = +1
Query: 7 SVNASRASPSKSGQNHAAGSSRAGPKWPVRGSQGXRSQVITPXVPPTSHTGMPSSLVSTG 186
++N S + S Q A + G P G Q +TP + PTS T P S VST
Sbjct: 471 AINRSSSLSGVSSQQSAINVNTPGINGPYANQNG---QQVTPPINPTSFTTTPISEVSTT 527
Query: 187 TP 192
P
Sbjct: 528 PP 529
>UniRef50_Q8PSL5 Cluster: Putative uncharacterized protein; n=1;
Methanosarcina mazei|Rep: Putative uncharacterized
protein - Methanosarcina mazei (Methanosarcina frisia)
Length = 1110
Score = 32.3 bits (70), Expect = 7.6
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +3
Query: 306 FSFEKFSAKDLKDPAKRKKLRFNTRVRFEERYKS 407
FSFE+F A +PA R +RF R R E +S
Sbjct: 459 FSFERFGATGTGEPALRGSVRFTLRFRMSEETES 492
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 472,931,964
Number of Sequences: 1657284
Number of extensions: 9138578
Number of successful extensions: 30766
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 29643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30726
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35822246242
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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