Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_J23
(549 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0951 - 21769342-21769752 109 2e-24
02_02_0470 - 10700092-10700505 107 4e-24
02_04_0433 - 22891261-22891509,22892181-22892301,22892405-228924... 34 0.086
09_01_0103 - 1628763-1628879,1641827-1642921,1645126-1645476,164... 30 1.4
07_01_0013 - 99952-100413,100534-100704 30 1.4
03_03_0247 - 15801705-15802478,15802558-15802728,15802886-15803047 30 1.4
04_03_0540 + 16929782-16929834,16929937-16930032,16930111-169301... 29 1.8
01_06_1350 + 36505926-36505978,36506081-36506176,36506255-365063... 29 1.8
10_05_0026 + 8262237-8262899,8263300-8263509,8263599-8265480,826... 29 2.4
08_02_0167 - 13564466-13566227,13566361-13566644,13566684-135675... 29 2.4
08_01_0441 + 3890231-3890845,3891253-3894220,3906625-3906713,390... 29 2.4
07_01_1103 + 10141766-10143583 29 2.4
10_02_0059 + 4785858-4786988 29 3.2
09_04_0061 - 14256767-14256845,14256862-14257224,14260846-14261555 29 3.2
09_02_0555 - 10588685-10592038 29 3.2
07_03_1512 + 27288779-27289222,27298101-27298399,27298499-272985... 29 3.2
03_02_1029 - 13488535-13493037 29 3.2
11_06_0610 - 25449085-25453284 28 4.3
04_04_1192 + 31611804-31612113,31612235-31614058,31614098-316148... 28 4.3
01_05_0687 + 24288648-24292746,24293737-24293844,24294333-242944... 28 4.3
08_01_0117 + 941334-941339,941720-941906,942444-942565,942648-94... 28 5.6
06_03_0345 + 19758188-19758382,19759857-19759952,19760061-197601... 28 5.6
09_04_0739 - 19833462-19834456,19835272-19835333,19835846-198359... 27 7.5
04_04_1327 + 32677408-32677460,32677563-32677658,32677737-326778... 27 7.5
04_04_0211 - 23636377-23636532,23636624-23636805,23637853-236379... 27 7.5
03_05_0527 + 25220375-25221425,25221513-25222182,25222347-252224... 27 7.5
11_01_0766 - 6432455-6433342 27 9.9
01_01_0469 - 3456067-3456123,3456414-3456565,3456649-3456779,345... 27 9.9
>10_08_0951 - 21769342-21769752
Length = 136
Score = 109 bits (261), Expect = 2e-24
Identities = 48/108 (44%), Positives = 73/108 (67%), Gaps = 2/108 (1%)
Frame = +3
Query: 126 YAXGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVD 305
+ GT D+PYGH VAG+ +YP+KV ++ K K+S++K F+K+VN+ HLMPTRYT+D
Sbjct: 29 FEEGTRDRPYGHCLVAGLAKYPKKVIRKDSAKKTAKKSRVKCFLKLVNFTHLMPTRYTLD 88
Query: 306 FSFEKFSAKDLKDPAKRKKLRF--NTRVRFEERYKSGKNKWFFQKLRF 443
++ +A + KK+ + + R E+R+K+GKN+WFF KLRF
Sbjct: 89 VDLKEVAAGPDALATRDKKVAACKSAKARLEDRFKTGKNRWFFTKLRF 136
Score = 38.3 bits (85), Expect = 0.004
Identities = 19/69 (27%), Positives = 36/69 (52%)
Frame = +2
Query: 47 KIMQPGQVVLVLSGRYAGRKAXVVKSLRRRYLRQAIRACLRRWYRQVPPESAQEDGKE*N 226
K ++PG+ V++L GR+AGRKA +V+ + CL + P + ++D +
Sbjct: 3 KFLKPGKAVILLQGRFAGRKAVIVRVFEEGTRDRPYGHCLVAGLAKYPKKVIRKDSAKKT 62
Query: 227 PQEVQDKAF 253
++ + K F
Sbjct: 63 AKKSRVKCF 71
>02_02_0470 - 10700092-10700505
Length = 137
Score = 107 bits (258), Expect = 4e-24
Identities = 50/109 (45%), Positives = 73/109 (66%), Gaps = 3/109 (2%)
Frame = +3
Query: 126 YAXGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVD 305
+ GT D+PYGH VAG+ +YP+KV ++ K K+S++K F+K+VN+ H+MPTRYT+D
Sbjct: 29 FEEGTRDRPYGHCLVAGLAKYPKKVIRKDSAKKTAKKSRVKCFLKLVNFTHIMPTRYTLD 88
Query: 306 FSFEKFSAKDLKDPAKR-KKLRF--NTRVRFEERYKSGKNKWFFQKLRF 443
F+ ++ A R KK+ + R EER+K+GKN+WFF KLRF
Sbjct: 89 VDFKDVASGGPDALATRDKKVAACKAAKARLEERFKTGKNRWFFTKLRF 137
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/69 (28%), Positives = 36/69 (52%)
Frame = +2
Query: 47 KIMQPGQVVLVLSGRYAGRKAXVVKSLRRRYLRQAIRACLRRWYRQVPPESAQEDGKE*N 226
K ++PG+ V++L GRYAGRKA +V+ + CL + P + ++D +
Sbjct: 3 KFLKPGKAVILLQGRYAGRKAVIVRVFEEGTRDRPYGHCLVAGLAKYPKKVIRKDSAKKT 62
Query: 227 PQEVQDKAF 253
++ + K F
Sbjct: 63 AKKSRVKCF 71
>02_04_0433 -
22891261-22891509,22892181-22892301,22892405-22892496,
22892692-22892755,22892855-22892920,22893102-22893193,
22893991-22894050,22894181-22894270,22894484-22894613,
22895066-22895157,22895299-22895373,22895663-22895754,
22896496-22896586,22897541-22897574,22897745-22897791,
22899110-22899209,22899300-22899436,22900837-22901015,
22901146-22901188,22901264-22901297,22901839-22901948,
22902043-22902224,22903062-22903168,22903266-22903480
Length = 833
Score = 33.9 bits (74), Expect = 0.086
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +2
Query: 11 STRQGHLPPSLGKIMQPGQVVLVLSGRYAGRKAXVVKSLR 130
STR+ + P L + PG V+++L+GRY G++ +K L+
Sbjct: 62 STRKAN-PTKLRSTITPGTVLILLAGRYMGKRVVFLKQLK 100
>09_01_0103 -
1628763-1628879,1641827-1642921,1645126-1645476,
1645567-1645734
Length = 576
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = -3
Query: 367 RSFLRLAGSFRSFALNFSKLKSTV*RV 287
RSFL LAG +R F NFSK+ ++ R+
Sbjct: 453 RSFLGLAGYYRRFIENFSKIAKSMTRL 479
>07_01_0013 - 99952-100413,100534-100704
Length = 210
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 5/58 (8%)
Frame = +1
Query: 13 NASRASPSKSGQNHAAGSSRAGPKWPVRGSQGXRSQVITPXVPP-----TSHTGMPSS 171
++S P+ + A SSR+ +WP + R+ + VPP +H G+P S
Sbjct: 75 HSSAPPPASAALGTIAPSSRSPRRWPPTAADATRAGLAQSSVPPCRPCSATHAGLPQS 132
>03_03_0247 - 15801705-15802478,15802558-15802728,15802886-15803047
Length = 368
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 70 RAGPKWPVRGSQGXRSQVITPXVPPTSHTGMP 165
R GP P +G +G R+ + P +P SH P
Sbjct: 113 RGGPVAPPQGRRGRRNLTVAPSLPLLSHASPP 144
>04_03_0540 +
16929782-16929834,16929937-16930032,16930111-16930185,
16930819-16930893,16930987-16931209,16931303-16931546,
16932111-16932568,16932647-16932928,16933032-16933733
Length = 735
Score = 29.5 bits (63), Expect = 1.8
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = -2
Query: 356 TFSRVFQVFCAEFFKAEVNCITCWHQVIIVYNLDERLYLGPLVDFILSHPLVHF 195
TF + F + E + WH++I YNL++ +YL + D V+F
Sbjct: 298 TFKKAFHKVLTQTLTEE-EFVAAWHKLIRDYNLEKSVYLRHIWDIRRKWAFVYF 350
>01_06_1350 +
36505926-36505978,36506081-36506176,36506255-36506329,
36506964-36507038,36507132-36507348,36507442-36507685,
36508250-36508707,36508786-36509067,36509171-36509872
Length = 733
Score = 29.5 bits (63), Expect = 1.8
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = -2
Query: 356 TFSRVFQVFCAEFFKAEVNCITCWHQVIIVYNLDERLYLGPLVDFILSHPLVHF 195
TF + F + E + WH++I YNL++ +YL + D V+F
Sbjct: 296 TFKKAFHKVLTQTLTEE-EFVAAWHKLIRDYNLEKSVYLRHIWDIRRKWAFVYF 348
>10_05_0026 + 8262237-8262899,8263300-8263509,8263599-8265480,
8265508-8265704,8275672-8275824
Length = 1034
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -3
Query: 367 RSFLRLAGSFRSFALNFSKLKSTV*RV 287
RSFL LAG +R F NFSK+ + R+
Sbjct: 954 RSFLGLAGYYRRFIENFSKIDKPMTRL 980
>08_02_0167 -
13564466-13566227,13566361-13566644,13566684-13567540,
13567684-13567957,13567973-13568218
Length = 1140
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -3
Query: 367 RSFLRLAGSFRSFALNFSKL 308
RSFL LAG +R F NFSK+
Sbjct: 505 RSFLGLAGYYRRFIKNFSKI 524
>08_01_0441 + 3890231-3890845,3891253-3894220,3906625-3906713,
3908317-3908337
Length = 1230
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -3
Query: 367 RSFLRLAGSFRSFALNFSKLKSTV*RV 287
RSFL LAG +R F NFSK+ + R+
Sbjct: 985 RSFLGLAGYYRRFIENFSKIAKPMTRL 1011
>07_01_1103 + 10141766-10143583
Length = 605
Score = 29.1 bits (62), Expect = 2.4
Identities = 19/77 (24%), Positives = 28/77 (36%)
Frame = +1
Query: 10 VNASRASPSKSGQNHAAGSSRAGPKWPVRGSQGXRSQVITPXVPPTSHTGMPSSLVSTGT 189
V +RA+P +G A R P P S G ++ +PP +P GT
Sbjct: 180 VGRARAAPQSAGTETALLEERVMPPQPAPQSVGTEDALVEERIPPPQPVPIPP---IAGT 236
Query: 190 PGKCTRGWERIKSTRGP 240
G E ++ P
Sbjct: 237 EDALDVGTEDVRGRAAP 253
>10_02_0059 + 4785858-4786988
Length = 376
Score = 28.7 bits (61), Expect = 3.2
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -3
Query: 367 RSFLRLAGSFRSFALNFSKL 308
RSFL LAG +R F NFSK+
Sbjct: 224 RSFLGLAGYYRRFIENFSKI 243
>09_04_0061 - 14256767-14256845,14256862-14257224,14260846-14261555
Length = 383
Score = 28.7 bits (61), Expect = 3.2
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -3
Query: 367 RSFLRLAGSFRSFALNFSKL 308
RSFL LAG +R F NFSK+
Sbjct: 281 RSFLGLAGYYRRFIENFSKI 300
>09_02_0555 - 10588685-10592038
Length = 1117
Score = 28.7 bits (61), Expect = 3.2
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -3
Query: 367 RSFLRLAGSFRSFALNFSKL 308
RSFL LAG +R F NFSK+
Sbjct: 411 RSFLGLAGYYRRFIENFSKI 430
>07_03_1512 + 27288779-27289222,27298101-27298399,27298499-27298589,
27298701-27298766,27299151-27302660,27311604-27312224
Length = 1676
Score = 28.7 bits (61), Expect = 3.2
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -3
Query: 367 RSFLRLAGSFRSFALNFSKL 308
RSFL LAG +R F NFSK+
Sbjct: 1071 RSFLGLAGYYRRFIENFSKI 1090
>03_02_1029 - 13488535-13493037
Length = 1500
Score = 28.7 bits (61), Expect = 3.2
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -3
Query: 367 RSFLRLAGSFRSFALNFSKL 308
RSFL LAG +R F NFSK+
Sbjct: 794 RSFLGLAGYYRRFIENFSKI 813
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 28.3 bits (60), Expect = 4.3
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 127 TPXVPPTSHTGMPSSLVSTGTPGKCTRGWERIKSTRGP 240
+P +PPTSHT P+ T +P K + E+ P
Sbjct: 749 SPPIPPTSHTSPPTPEEYTPSPPKSSPPEEKSPPPHSP 786
>04_04_1192 + 31611804-31612113,31612235-31614058,31614098-31614842,
31615047-31616835,31617136-31617163,31617343-31617794
Length = 1715
Score = 28.3 bits (60), Expect = 4.3
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Frame = +3
Query: 177 IDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSF----EKFSAKDLK 341
I Y R++ M ++ + K+K F +NY+H R T ++ E S KDLK
Sbjct: 919 IGTYNRELTSNMRILRMERCDKLKDFTLFLNYDHFRVERKTWQWTILPFEEMHSLKDLK 977
>01_05_0687 +
24288648-24292746,24293737-24293844,24294333-24294442,
24295208-24295282
Length = 1463
Score = 28.3 bits (60), Expect = 4.3
Identities = 16/70 (22%), Positives = 28/70 (40%)
Frame = +1
Query: 31 PSKSGQNHAAGSSRAGPKWPVRGSQGXRSQVITPXVPPTSHTGMPSSLVSTGTPGKCTRG 210
P +S + + S + P++G + P P H P + +PG+ T G
Sbjct: 10 PPESARMGSPPPSHSPSPPPLQGDPSLPTDAPPPEPSPQPHHATP---IPPPSPGQATEG 66
Query: 211 WERIKSTRGP 240
W R + + P
Sbjct: 67 WPRAEEPQPP 76
>08_01_0117 +
941334-941339,941720-941906,942444-942565,942648-942656,
942965-943067,943204-943247,943487-943516,943615-943737,
943816-943841,943934-944015,944137-944178,944259-944292,
944424-944451,944779-945022,945023-945124,945318-945443,
945533-945715,945803-945961
Length = 549
Score = 27.9 bits (59), Expect = 5.6
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Frame = +1
Query: 28 SPSKSGQNHAAGSSRAGPKWPVRGSQGXRSQVITPXVPPT---SHTGMPSSLVSTGTP 192
S S SGQ AAG R+G +R +G + + T +H+ P++ +GTP
Sbjct: 3 SESGSGQRRAAGGRRSGGVGRLRRERGGHFPIPSRFADETLTGAHSPPPAAAHRSGTP 60
>06_03_0345 +
19758188-19758382,19759857-19759952,19760061-19760144,
19760504-19760573,19760934-19761838,19763661-19764287
Length = 658
Score = 27.9 bits (59), Expect = 5.6
Identities = 19/60 (31%), Positives = 24/60 (40%), Gaps = 7/60 (11%)
Frame = +1
Query: 61 GSSRAGPK--WPV-----RGSQGXRSQVITPXVPPTSHTGMPSSLVSTGTPGKCTRGWER 219
G SR G + WPV R + G R P +PP PSS +P + G R
Sbjct: 325 GGSRRGERRWWPVPAPPERAAAGSRRARARPSIPPLPRRACPSSWPFPTSPKRAAAGSRR 384
>09_04_0739 -
19833462-19834456,19835272-19835333,19835846-19835937,
19836271-19836540,19836795-19836913,19836947-19837778
Length = 789
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +1
Query: 7 SVNASRASPSKSGQNHAAGSSRAGP 81
+ NA ++SP+KS + A G +R GP
Sbjct: 605 AANAVKSSPAKSRMSPAKGKARTGP 629
>04_04_1327 +
32677408-32677460,32677563-32677658,32677737-32677811,
32678446-32678520,32678615-32678837,32678931-32679174,
32679740-32680197,32680276-32680470,32680660-32681361
Length = 706
Score = 27.5 bits (58), Expect = 7.5
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = -2
Query: 356 TFSRVFQVFCAEFFKAEVNCITCWHQVIIVYNLDERLYLGPLVDFILSHPLVHF 195
TF +VF + E + WH++I YNL++ + L + D V+F
Sbjct: 298 TFKKVFHKVLTQTLTEE-EFVAAWHKLIRDYNLEKSVNLRHIWDIRRKWAFVYF 350
>04_04_0211 -
23636377-23636532,23636624-23636805,23637853-23637959,
23637997-23638280
Length = 242
Score = 27.5 bits (58), Expect = 7.5
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +2
Query: 59 PGQVVLVLSGRYAGRKAXVVKSLR 130
PG V+++L+GR+ G++ +K L+
Sbjct: 100 PGTVLILLAGRFMGKRVVFLKQLK 123
>03_05_0527 +
25220375-25221425,25221513-25222182,25222347-25222440,
25222688-25222870
Length = 665
Score = 27.5 bits (58), Expect = 7.5
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -3
Query: 367 RSFLRLAGSFRSFALNFSKL 308
RSFL LAG +R F NFS++
Sbjct: 641 RSFLGLAGYYRRFIENFSRI 660
>11_01_0766 - 6432455-6433342
Length = 295
Score = 27.1 bits (57), Expect = 9.9
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +1
Query: 13 NASRASPSKSGQNHAAGSSRAGPKWPVRGSQGXRSQVITPXVPPTSHTGMPSSLVST 183
+A+ S + + + AAGS+ A PV GS ++ PP T P+ V+T
Sbjct: 238 SAAAGSTADTATSAAAGSTSAKETSPVAGSTADKTYAAAGSAPPVVDTA-PAPPVTT 293
>01_01_0469 -
3456067-3456123,3456414-3456565,3456649-3456779,
3456846-3458036,3458460-3458541,3458947-3458984,
3459091-3459250,3459356-3459557,3460245-3460329,
3460809-3460863,3461230-3461325,3461807-3461940,
3462031-3462043,3462315-3462419,3462935-3463121
Length = 895
Score = 27.1 bits (57), Expect = 9.9
Identities = 17/63 (26%), Positives = 24/63 (38%)
Frame = +3
Query: 192 RKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRF 371
R H R+ N + S+ ++ N PT F + KD P +R R
Sbjct: 292 RSKHGRLDDNLTDENSERLWKMEPFNSEDRFPTPIVEQFDTRDYGFKDRYSPEQRTSTRT 351
Query: 372 NTR 380
NTR
Sbjct: 352 NTR 354
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,854,460
Number of Sequences: 37544
Number of extensions: 251700
Number of successful extensions: 908
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 906
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1233951264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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