Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_J23
(549 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L19527-1|AAA19815.1| 136|Homo sapiens ribosomal protein L27 pro... 153 3e-37
L05094-1|AAC15857.1| 136|Homo sapiens ribosomal protein L27 pro... 153 3e-37
BC098560-1|AAH98560.1| 136|Homo sapiens ribosomal protein L27 p... 153 3e-37
BC021886-1|AAH21886.1| 140|Homo sapiens RPL27 protein protein. 153 3e-37
BC010026-1|AAH10026.1| 136|Homo sapiens ribosomal protein L27 p... 153 3e-37
BC007273-1|AAH07273.1| 136|Homo sapiens ribosomal protein L27 p... 153 3e-37
BC002588-1|AAH02588.1| 136|Homo sapiens ribosomal protein L27 p... 153 3e-37
BC001700-1|AAH01700.1| 136|Homo sapiens ribosomal protein L27 p... 153 3e-37
AB061851-1|BAB79492.1| 136|Homo sapiens ribosomal protein L27 p... 153 3e-37
U25752-1|AAA93226.1| 40|Homo sapiens ribosomal protein L27 pro... 60 4e-09
Y17397-1|CAA76763.1| 1690|Homo sapiens collagen alpha 4 type IV ... 33 0.87
X81053-1|CAA56943.1| 1690|Homo sapiens type IV collagen alpha 4 ... 33 0.87
AC079235-1|AAY14670.1| 1324|Homo sapiens unknown protein. 33 0.87
BX537845-1|CAD97854.1| 1156|Homo sapiens hypothetical protein pr... 31 2.0
BC101203-1|AAI01204.1| 130|Homo sapiens chromosome 15 open read... 31 2.0
BC101202-1|AAI01203.1| 130|Homo sapiens chromosome 15 open read... 31 2.0
BC101201-1|AAI01202.1| 130|Homo sapiens chromosome 15 open read... 31 2.0
BC043404-1|AAH43404.1| 1143|Homo sapiens non-SMC condensin II co... 31 2.0
BC020560-1|AAH20560.1| 935|Homo sapiens NCAPG2 protein protein. 31 2.0
AK131238-1|BAD18420.1| 715|Homo sapiens protein ( Homo sapiens ... 31 2.0
AK091107-1|BAC03584.1| 130|Homo sapiens protein ( Homo sapiens ... 31 2.0
AK023347-1|BAB14534.1| 698|Homo sapiens protein ( Homo sapiens ... 31 2.0
AK022744-1|BAB14219.1| 774|Homo sapiens protein ( Homo sapiens ... 31 2.0
AK000318-1|BAA91081.1| 888|Homo sapiens protein ( Homo sapiens ... 31 2.0
BC039461-1|AAH39461.1| 336|Homo sapiens RNF170 protein protein. 31 2.7
AB040955-1|BAA96046.1| 1044|Homo sapiens KIAA1522 protein protein. 31 3.5
BC033308-1|AAH33308.1| 767|Homo sapiens DAZ interacting protein... 30 4.6
AY016295-1|AAL13166.1| 1347|Homo sapiens type V preprocollagen a... 30 4.6
AB209045-1|BAD92282.1| 1502|Homo sapiens alpha 2 type V collagen... 30 4.6
Y14690-1|CAA75002.1| 1496|Homo sapiens procollagen alpha 2(V) pr... 30 6.1
J04478-1|AAA51859.1| 463|Homo sapiens COL5A2 protein. 30 6.1
AL133561-1|CAB63715.1| 580|Homo sapiens hypothetical protein pr... 29 8.1
AK131515-1|BAD18658.1| 122|Homo sapiens protein ( Homo sapiens ... 29 8.1
>L19527-1|AAA19815.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 153 bits (372), Expect = 3e-37
Identities = 73/105 (69%), Positives = 83/105 (79%), Gaps = 2/105 (1%)
Frame = +3
Query: 135 GTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSF 314
GTSD+PY HA VAGIDRYPRKV MGK KI KRSKIK FVKV NYNHLMPTRY+VD
Sbjct: 32 GTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPL 91
Query: 315 EKFSA-KDL-KDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 443
+K KD+ +DPA ++K R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 92 DKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
Score = 47.2 bits (107), Expect = 4e-05
Identities = 19/29 (65%), Positives = 27/29 (93%)
Frame = +2
Query: 41 LGKIMQPGQVVLVLSGRYAGRKAXVVKSL 127
+GK M+PG+VVLVL+GRY+GRKA +VK++
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNI 29
>L05094-1|AAC15857.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 153 bits (372), Expect = 3e-37
Identities = 73/105 (69%), Positives = 83/105 (79%), Gaps = 2/105 (1%)
Frame = +3
Query: 135 GTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSF 314
GTSD+PY HA VAGIDRYPRKV MGK KI KRSKIK FVKV NYNHLMPTRY+VD
Sbjct: 32 GTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPL 91
Query: 315 EKFSA-KDL-KDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 443
+K KD+ +DPA ++K R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 92 DKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
Score = 47.2 bits (107), Expect = 4e-05
Identities = 19/29 (65%), Positives = 27/29 (93%)
Frame = +2
Query: 41 LGKIMQPGQVVLVLSGRYAGRKAXVVKSL 127
+GK M+PG+VVLVL+GRY+GRKA +VK++
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNI 29
>BC098560-1|AAH98560.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 153 bits (372), Expect = 3e-37
Identities = 73/105 (69%), Positives = 83/105 (79%), Gaps = 2/105 (1%)
Frame = +3
Query: 135 GTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSF 314
GTSD+PY HA VAGIDRYPRKV MGK KI KRSKIK FVKV NYNHLMPTRY+VD
Sbjct: 32 GTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPL 91
Query: 315 EKFSA-KDL-KDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 443
+K KD+ +DPA ++K R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 92 DKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
Score = 47.2 bits (107), Expect = 4e-05
Identities = 19/29 (65%), Positives = 27/29 (93%)
Frame = +2
Query: 41 LGKIMQPGQVVLVLSGRYAGRKAXVVKSL 127
+GK M+PG+VVLVL+GRY+GRKA +VK++
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNI 29
>BC021886-1|AAH21886.1| 140|Homo sapiens RPL27 protein protein.
Length = 140
Score = 153 bits (372), Expect = 3e-37
Identities = 73/105 (69%), Positives = 83/105 (79%), Gaps = 2/105 (1%)
Frame = +3
Query: 135 GTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSF 314
GTSD+PY HA VAGIDRYPRKV MGK KI KRSKIK FVKV NYNHLMPTRY+VD
Sbjct: 36 GTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPL 95
Query: 315 EKFSA-KDL-KDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 443
+K KD+ +DPA ++K R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 96 DKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 140
Score = 30.7 bits (66), Expect = 3.5
Identities = 12/18 (66%), Positives = 17/18 (94%)
Frame = +2
Query: 74 LVLSGRYAGRKAXVVKSL 127
LVL+GRY+GRKA +VK++
Sbjct: 16 LVLAGRYSGRKAVIVKNI 33
>BC010026-1|AAH10026.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 153 bits (372), Expect = 3e-37
Identities = 73/105 (69%), Positives = 83/105 (79%), Gaps = 2/105 (1%)
Frame = +3
Query: 135 GTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSF 314
GTSD+PY HA VAGIDRYPRKV MGK KI KRSKIK FVKV NYNHLMPTRY+VD
Sbjct: 32 GTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPL 91
Query: 315 EKFSA-KDL-KDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 443
+K KD+ +DPA ++K R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 92 DKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
Score = 47.2 bits (107), Expect = 4e-05
Identities = 19/29 (65%), Positives = 27/29 (93%)
Frame = +2
Query: 41 LGKIMQPGQVVLVLSGRYAGRKAXVVKSL 127
+GK M+PG+VVLVL+GRY+GRKA +VK++
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNI 29
>BC007273-1|AAH07273.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 153 bits (372), Expect = 3e-37
Identities = 73/105 (69%), Positives = 83/105 (79%), Gaps = 2/105 (1%)
Frame = +3
Query: 135 GTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSF 314
GTSD+PY HA VAGIDRYPRKV MGK KI KRSKIK FVKV NYNHLMPTRY+VD
Sbjct: 32 GTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPL 91
Query: 315 EKFSA-KDL-KDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 443
+K KD+ +DPA ++K R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 92 DKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
Score = 47.2 bits (107), Expect = 4e-05
Identities = 19/29 (65%), Positives = 27/29 (93%)
Frame = +2
Query: 41 LGKIMQPGQVVLVLSGRYAGRKAXVVKSL 127
+GK M+PG+VVLVL+GRY+GRKA +VK++
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNI 29
>BC002588-1|AAH02588.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 153 bits (372), Expect = 3e-37
Identities = 73/105 (69%), Positives = 83/105 (79%), Gaps = 2/105 (1%)
Frame = +3
Query: 135 GTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSF 314
GTSD+PY HA VAGIDRYPRKV MGK KI KRSKIK FVKV NYNHLMPTRY+VD
Sbjct: 32 GTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPL 91
Query: 315 EKFSA-KDL-KDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 443
+K KD+ +DPA ++K R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 92 DKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
Score = 47.2 bits (107), Expect = 4e-05
Identities = 19/29 (65%), Positives = 27/29 (93%)
Frame = +2
Query: 41 LGKIMQPGQVVLVLSGRYAGRKAXVVKSL 127
+GK M+PG+VVLVL+GRY+GRKA +VK++
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNI 29
>BC001700-1|AAH01700.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 153 bits (372), Expect = 3e-37
Identities = 73/105 (69%), Positives = 83/105 (79%), Gaps = 2/105 (1%)
Frame = +3
Query: 135 GTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSF 314
GTSD+PY HA VAGIDRYPRKV MGK KI KRSKIK FVKV NYNHLMPTRY+VD
Sbjct: 32 GTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPL 91
Query: 315 EKFSA-KDL-KDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 443
+K KD+ +DPA ++K R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 92 DKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
Score = 47.2 bits (107), Expect = 4e-05
Identities = 19/29 (65%), Positives = 27/29 (93%)
Frame = +2
Query: 41 LGKIMQPGQVVLVLSGRYAGRKAXVVKSL 127
+GK M+PG+VVLVL+GRY+GRKA +VK++
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNI 29
>AB061851-1|BAB79492.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 153 bits (372), Expect = 3e-37
Identities = 73/105 (69%), Positives = 83/105 (79%), Gaps = 2/105 (1%)
Frame = +3
Query: 135 GTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSF 314
GTSD+PY HA VAGIDRYPRKV MGK KI KRSKIK FVKV NYNHLMPTRY+VD
Sbjct: 32 GTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPL 91
Query: 315 EKFSA-KDL-KDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 443
+K KD+ +DPA ++K R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 92 DKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
Score = 47.2 bits (107), Expect = 4e-05
Identities = 19/29 (65%), Positives = 27/29 (93%)
Frame = +2
Query: 41 LGKIMQPGQVVLVLSGRYAGRKAXVVKSL 127
+GK M+PG+VVLVL+GRY+GRKA +VK++
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNI 29
>U25752-1|AAA93226.1| 40|Homo sapiens ribosomal protein L27
protein.
Length = 40
Score = 60.5 bits (140), Expect = 4e-09
Identities = 26/39 (66%), Positives = 33/39 (84%), Gaps = 1/39 (2%)
Frame = +3
Query: 330 KDL-KDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 443
KD+ +DPA ++K R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 2 KDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 40
>Y17397-1|CAA76763.1| 1690|Homo sapiens collagen alpha 4 type IV
protein.
Length = 1690
Score = 32.7 bits (71), Expect = 0.87
Identities = 23/61 (37%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
Frame = +1
Query: 61 GSSRAGPKWPVRGSQGXRSQVITPXVPPTSHTGMPSSLVSTGTPG-KCTRGWERIKSTRG 237
GSS GP P GS G Q P P H G P +G PG K RG G
Sbjct: 737 GSSPVGPPGPP-GSPGVNGQKGIPGDPAFGHLGPPGKRGLSGVPGIKGPRGDPGCPGAEG 795
Query: 238 P 240
P
Sbjct: 796 P 796
>X81053-1|CAA56943.1| 1690|Homo sapiens type IV collagen alpha 4
chain protein.
Length = 1690
Score = 32.7 bits (71), Expect = 0.87
Identities = 23/61 (37%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
Frame = +1
Query: 61 GSSRAGPKWPVRGSQGXRSQVITPXVPPTSHTGMPSSLVSTGTPG-KCTRGWERIKSTRG 237
GSS GP P GS G Q P P H G P +G PG K RG G
Sbjct: 737 GSSPVGPPGPP-GSPGVNGQKGIPGDPAFGHLGPPGKRGLSGVPGIKGPRGDPGCPGAEG 795
Query: 238 P 240
P
Sbjct: 796 P 796
>AC079235-1|AAY14670.1| 1324|Homo sapiens unknown protein.
Length = 1324
Score = 32.7 bits (71), Expect = 0.87
Identities = 23/61 (37%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
Frame = +1
Query: 61 GSSRAGPKWPVRGSQGXRSQVITPXVPPTSHTGMPSSLVSTGTPG-KCTRGWERIKSTRG 237
GSS GP P GS G Q P P H G P +G PG K RG G
Sbjct: 737 GSSPVGPPGPP-GSPGVNGQKGIPGDPAFGHLGPPGKRGLSGVPGIKGPRGDPGCPGAEG 795
Query: 238 P 240
P
Sbjct: 796 P 796
>BX537845-1|CAD97854.1| 1156|Homo sapiens hypothetical protein
protein.
Length = 1156
Score = 31.5 bits (68), Expect = 2.0
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 140 LRQAIRACLRRWYRQVPPESAQEDGKE*NPQEVQDK 247
+R + AC++R R+ P + +EDG+E V DK
Sbjct: 574 IRHCLNACIQRAVREPPEDEEEEDGREKENVTVLDK 609
>BC101203-1|AAI01204.1| 130|Homo sapiens chromosome 15 open reading
frame 37 protein.
Length = 130
Score = 31.5 bits (68), Expect = 2.0
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = +1
Query: 34 SKSGQNHAAGSSRAG-PKWPVRGSQGXRSQVITPXVPPTSHTGMPSSLVSTGTPGKCTRG 210
S SG N +RA P+ P + +G S V+ PPT T +PS+ P + G
Sbjct: 33 SPSGSNQPTNPNRAQHPEGP-QSREGATSPVLASLEPPTP-TDLPSARARPRVPAESGPG 90
Query: 211 W--ERIKSTRG 237
W + + TRG
Sbjct: 91 WLHKARRPTRG 101
>BC101202-1|AAI01203.1| 130|Homo sapiens chromosome 15 open reading
frame 37 protein.
Length = 130
Score = 31.5 bits (68), Expect = 2.0
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = +1
Query: 34 SKSGQNHAAGSSRAG-PKWPVRGSQGXRSQVITPXVPPTSHTGMPSSLVSTGTPGKCTRG 210
S SG N +RA P+ P + +G S V+ PPT T +PS+ P + G
Sbjct: 33 SPSGSNQPTNPNRAQHPEGP-QSREGATSPVLASLEPPTP-TDLPSARARPRVPAESGPG 90
Query: 211 W--ERIKSTRG 237
W + + TRG
Sbjct: 91 WLHKARRPTRG 101
>BC101201-1|AAI01202.1| 130|Homo sapiens chromosome 15 open reading
frame 37 protein.
Length = 130
Score = 31.5 bits (68), Expect = 2.0
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = +1
Query: 34 SKSGQNHAAGSSRAG-PKWPVRGSQGXRSQVITPXVPPTSHTGMPSSLVSTGTPGKCTRG 210
S SG N +RA P+ P + +G S V+ PPT T +PS+ P + G
Sbjct: 33 SPSGSNQPTNPNRAQHPEGP-QSREGATSPVLASLEPPTP-TDLPSARARPRVPAESGPG 90
Query: 211 W--ERIKSTRG 237
W + + TRG
Sbjct: 91 WLHKARRPTRG 101
>BC043404-1|AAH43404.1| 1143|Homo sapiens non-SMC condensin II
complex, subunit G2 protein.
Length = 1143
Score = 31.5 bits (68), Expect = 2.0
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 140 LRQAIRACLRRWYRQVPPESAQEDGKE*NPQEVQDK 247
+R + AC++R R+ P + +EDG+E V DK
Sbjct: 574 IRHCLNACIQRAVREPPEDEEEEDGREKENVTVLDK 609
>BC020560-1|AAH20560.1| 935|Homo sapiens NCAPG2 protein protein.
Length = 935
Score = 31.5 bits (68), Expect = 2.0
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 140 LRQAIRACLRRWYRQVPPESAQEDGKE*NPQEVQDK 247
+R + AC++R R+ P + +EDG+E V DK
Sbjct: 366 IRHCLNACIQRAVREPPEDEEEEDGREKENVTVLDK 401
>AK131238-1|BAD18420.1| 715|Homo sapiens protein ( Homo sapiens
cDNA FLJ16151 fis, clone BRAMY2045471, weakly similar
to Homo sapiens CGI-89 protein mRNA. ).
Length = 715
Score = 31.5 bits (68), Expect = 2.0
Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 6/77 (7%)
Frame = +1
Query: 7 SVNASRASPSKSGQNHAAGSSRAGPKWPVRGSQGX--RSQVITPXVPPTSHTGMP----S 168
S+ A +AS + G ++GS R+ + + G P HT +P S
Sbjct: 582 SLQADQASSNAPGPRPSSGSHRSPARQGLPSPPGTPHSPSYAGPKAVAFIHTDLPEPPPS 641
Query: 169 SLVSTGTPGKCTRGWER 219
V G G CTRGW R
Sbjct: 642 LTVQRGRIGTCTRGWGR 658
>AK091107-1|BAC03584.1| 130|Homo sapiens protein ( Homo sapiens
cDNA FLJ33788 fis, clone BRSSN2009244. ).
Length = 130
Score = 31.5 bits (68), Expect = 2.0
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = +1
Query: 34 SKSGQNHAAGSSRAG-PKWPVRGSQGXRSQVITPXVPPTSHTGMPSSLVSTGTPGKCTRG 210
S SG N +RA P+ P + +G S V+ PPT T +PS+ P + G
Sbjct: 33 SPSGSNQPTNPNRAQHPEGP-QSREGATSPVLASLEPPTP-TDLPSARARPRVPAESGPG 90
Query: 211 W--ERIKSTRG 237
W + + TRG
Sbjct: 91 WLHKARRPTRG 101
>AK023347-1|BAB14534.1| 698|Homo sapiens protein ( Homo sapiens
cDNA FLJ13285 fis, clone OVARC1001129. ).
Length = 698
Score = 31.5 bits (68), Expect = 2.0
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 140 LRQAIRACLRRWYRQVPPESAQEDGKE*NPQEVQDK 247
+R + AC++R R+ P + +EDG+E V DK
Sbjct: 129 IRHCLNACIQRAVREPPEDEEEEDGREKENVTVLDK 164
>AK022744-1|BAB14219.1| 774|Homo sapiens protein ( Homo sapiens
cDNA FLJ12682 fis, clone NT2RM4002452. ).
Length = 774
Score = 31.5 bits (68), Expect = 2.0
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 140 LRQAIRACLRRWYRQVPPESAQEDGKE*NPQEVQDK 247
+R + AC++R R+ P + +EDG+E V DK
Sbjct: 205 IRHCLNACIQRAVREPPEDEEEEDGREKENVTVLDK 240
>AK000318-1|BAA91081.1| 888|Homo sapiens protein ( Homo sapiens
cDNA FLJ20311 fis, clone HEP07319. ).
Length = 888
Score = 31.5 bits (68), Expect = 2.0
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 140 LRQAIRACLRRWYRQVPPESAQEDGKE*NPQEVQDK 247
+R + AC++R R+ P + +EDG+E V DK
Sbjct: 366 IRHCLNACIQRAVREPPEDEEEEDGREKENVTVLDK 401
>BC039461-1|AAH39461.1| 336|Homo sapiens RNF170 protein protein.
Length = 336
Score = 31.1 bits (67), Expect = 2.7
Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
Frame = +1
Query: 31 PSKSGQNHAAGSSRA--GPKWPVRGSQGXRSQVITPXVPPTSHTGMPSS 171
P++ G H G+ A G WP GS G R PP S PSS
Sbjct: 2 PARGGHAHPIGARGAADGGVWPSWGSSGRRGSAGRRESPPPSPRAPPSS 50
>AB040955-1|BAA96046.1| 1044|Homo sapiens KIAA1522 protein protein.
Length = 1044
Score = 30.7 bits (66), Expect = 3.5
Identities = 25/64 (39%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Frame = +1
Query: 61 GSSRAGPKWPVRG---SQGXRSQVITPXVPPTSHTGMPSSLVSTGTPGKCTRGW-ERIKS 228
G SR P+ P R S G SQ TP +PP G P+S PGK ER+ S
Sbjct: 515 GGSRRPPRSPERTLSPSSGYSSQSGTPTLPPKGLAGPPAS------PGKAQPPKPERVTS 568
Query: 229 TRGP 240
R P
Sbjct: 569 LRSP 572
>BC033308-1|AAH33308.1| 767|Homo sapiens DAZ interacting protein
1-like protein.
Length = 767
Score = 30.3 bits (65), Expect = 4.6
Identities = 21/73 (28%), Positives = 28/73 (38%), Gaps = 2/73 (2%)
Frame = +1
Query: 25 ASPSKSGQNHAAGSSRAGPKWPVRGSQGXRSQVITPXVPPTSHTGM--PSSLVSTGTPGK 198
A P A S+ A P P R S G +T P H G+ PSS + PG
Sbjct: 551 AQPKTRTLQVALPSTPAEPPPPTRQSHGSHGSSLTQVSAPAPHPGLHGPSSTPPSSGPGM 610
Query: 199 CTRGWERIKSTRG 237
T + + + G
Sbjct: 611 STPPFSSEEDSEG 623
>AY016295-1|AAL13166.1| 1347|Homo sapiens type V preprocollagen
alpha 2 chain protein.
Length = 1347
Score = 30.3 bits (65), Expect = 4.6
Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = +1
Query: 10 VNASRASPSKSGQNHAAGSSRA-GPKWPVRGSQGXRSQVITPXVPPTSHTGMPSSLVSTG 186
+ S P G AG + A GP+ P QG R + P P G+P ++ + G
Sbjct: 221 IPGSSGFPGNPGMKGEAGPTGARGPEGP----QGQRGETGPPG--PVGSPGLPGAIGTDG 274
Query: 187 TPGKCTRGWERIKSTRGP 240
TPG +G T GP
Sbjct: 275 TPG--AKGPTGSPGTSGP 290
>AB209045-1|BAD92282.1| 1502|Homo sapiens alpha 2 type V collagen
preproprotein variant protein.
Length = 1502
Score = 30.3 bits (65), Expect = 4.6
Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = +1
Query: 10 VNASRASPSKSGQNHAAGSSRA-GPKWPVRGSQGXRSQVITPXVPPTSHTGMPSSLVSTG 186
+ S P G AG + A GP+ P QG R + P P G+P ++ + G
Sbjct: 376 IPGSSGFPGNPGMKGEAGPTGARGPEGP----QGQRGETGPPG--PVGSPGLPGAIGTDG 429
Query: 187 TPGKCTRGWERIKSTRGP 240
TPG +G T GP
Sbjct: 430 TPG--AKGPTGSPGTSGP 445
>Y14690-1|CAA75002.1| 1496|Homo sapiens procollagen alpha 2(V)
protein.
Length = 1496
Score = 29.9 bits (64), Expect = 6.1
Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = +1
Query: 10 VNASRASPSKSGQNHAAGSSRA-GPKWPVRGSQGXRSQVITPXVPPTSHTGMPSSLVSTG 186
+ S P G AG + A GP+ P QG R + P P G+P ++ + G
Sbjct: 373 IPGSSGFPGNPGMKGEAGPTGARGPEGP----QGQRGETGPPG--PVGSPGLPGAIGTDG 426
Query: 187 TPGKCTRGWERIKSTRGP 240
TPG +G T GP
Sbjct: 427 TPG--PKGPTGSPGTSGP 442
>J04478-1|AAA51859.1| 463|Homo sapiens COL5A2 protein.
Length = 463
Score = 29.9 bits (64), Expect = 6.1
Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = +1
Query: 10 VNASRASPSKSGQNHAAGSSRA-GPKWPVRGSQGXRSQVITPXVPPTSHTGMPSSLVSTG 186
+ S P G AG + A GP+ P QG R + P P G+P ++ + G
Sbjct: 373 IPGSSGFPGNPGMKGEAGPTGARGPEGP----QGQRGETGPPG--PVGSPGLPGAIGTDG 426
Query: 187 TPGKCTRGWERIKSTRGP 240
TPG +G T GP
Sbjct: 427 TPG--PKGPTGSPGTSGP 442
>AL133561-1|CAB63715.1| 580|Homo sapiens hypothetical protein
protein.
Length = 580
Score = 29.5 bits (63), Expect = 8.1
Identities = 22/61 (36%), Positives = 28/61 (45%)
Frame = +1
Query: 22 RASPSKSGQNHAAGSSRAGPKWPVRGSQGXRSQVITPXVPPTSHTGMPSSLVSTGTPGKC 201
RASP + A +R P+ GS S + TP P S TG PS+ TGTP
Sbjct: 93 RASPRTPSR---ASPTRRLPRASPMGSPHRASPMRTP--PRASPTGTPSTASPTGTPSSA 147
Query: 202 T 204
+
Sbjct: 148 S 148
>AK131515-1|BAD18658.1| 122|Homo sapiens protein ( Homo sapiens
cDNA FLJ16739 fis, clone BRACE2009318. ).
Length = 122
Score = 29.5 bits (63), Expect = 8.1
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 115 SQVITPXVPPTSHTGMPSSLVSTGTPGKCTRGWE 216
SQV T +P + H MP+S + T KC WE
Sbjct: 15 SQVFTDFIPYSRHLQMPTSYPCSKTHFKCPLLWE 48
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,881,012
Number of Sequences: 237096
Number of extensions: 1402010
Number of successful extensions: 7473
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 7272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7456
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5421005376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -