Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_J22
         (810 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    26   1.6  
AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    24   4.8  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    24   4.8  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   6.4  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   6.4  

>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = -2

Query: 497 HTVPGPAGANDPGWPASWNHSDERDFSNASEAGADSSK 384
           H++  P  AN+  + A  NH  +RDF    +   D+ K
Sbjct: 672 HSIVPPPNANNLSY-AETNHKGQRDFDLTQDCTDDAGK 708


>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = -2

Query: 452 ASWNHSDERDFSNASEAGADS 390
           +S + SDE DF ++SE+ +DS
Sbjct: 466 SSSSESDEHDFYSSSESDSDS 486


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = -2

Query: 452 ASWNHSDERDFSNASEAGADS 390
           +S + SDE DF ++SE+ +DS
Sbjct: 466 SSSSESDEHDFYSSSESDSDS 486


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.8 bits (49), Expect = 6.4
 Identities = 10/37 (27%), Positives = 20/37 (54%)
 Frame = +3

Query: 267 YPIQALASHHAARGTRSHANSYGTSCTAFGTVEVLSY 377
           Y + A+++ + A    S++N Y ++     T+  LSY
Sbjct: 605 YQLSAISTSNTASLQLSYSNQYNSTLLTGYTIRTLSY 641


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.8 bits (49), Expect = 6.4
 Identities = 10/37 (27%), Positives = 20/37 (54%)
 Frame = +3

Query: 267 YPIQALASHHAARGTRSHANSYGTSCTAFGTVEVLSY 377
           Y + A+++ + A    S++N Y ++     T+  LSY
Sbjct: 606 YQLSAISTSNTASLQLSYSNQYNSTLLTGYTIRTLSY 642


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 787,575
Number of Sequences: 2352
Number of extensions: 15998
Number of successful extensions: 78
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 78
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 85655418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)