Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_J22
(810 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 58 1e-10
AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 58 1e-10
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 58 1e-10
AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin prot... 25 1.1
AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin prot... 25 1.1
AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II ... 23 2.5
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 3.3
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 23 4.4
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 23 4.4
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 22 7.7
AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength rhodo... 22 7.7
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 57.6 bits (133), Expect = 1e-10
Identities = 28/60 (46%), Positives = 39/60 (65%), Gaps = 4/60 (6%)
Frame = +1
Query: 631 FIELQDLLHGFRNPHVMDIKMGTRTFLXDEVSNA----HARADLYEKMVRLXPNAPTESE 798
+++LQDLL F +P VMD K+G RT+L E++ A R D+YEKMV++ P AP E
Sbjct: 329 YLQLQDLLGDFEHPCVMDCKVGVRTYLESELAKAKERPKLRKDMYEKMVQVDPTAPNAEE 388
Score = 27.9 bits (59), Expect = 0.12
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +1
Query: 421 KSRSSEWFQLAGHPGSL-APAGPGTVWKR 504
K + W QLAGH G+ A PGT+ K+
Sbjct: 236 KKQRYPWVQLAGHQGNFRAGPTPGTILKK 264
>AF388659-2|AAK71994.1| 463|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
Length = 463
Score = 57.6 bits (133), Expect = 1e-10
Identities = 28/60 (46%), Positives = 39/60 (65%), Gaps = 4/60 (6%)
Frame = +1
Query: 631 FIELQDLLHGFRNPHVMDIKMGTRTFLXDEVSNA----HARADLYEKMVRLXPNAPTESE 798
+++LQDLL F +P VMD K+G RT+L E++ A R D+YEKMV++ P AP E
Sbjct: 244 YLQLQDLLGDFEHPCVMDCKVGVRTYLESELAKAKERPKLRKDMYEKMVQVDPTAPNAEE 303
Score = 27.9 bits (59), Expect = 0.12
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +1
Query: 421 KSRSSEWFQLAGHPGSL-APAGPGTVWKR 504
K + W QLAGH G+ A PGT+ K+
Sbjct: 151 KKQRYPWVQLAGHQGNFRAGPTPGTILKK 179
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 57.6 bits (133), Expect = 1e-10
Identities = 28/60 (46%), Positives = 39/60 (65%), Gaps = 4/60 (6%)
Frame = +1
Query: 631 FIELQDLLHGFRNPHVMDIKMGTRTFLXDEVSNA----HARADLYEKMVRLXPNAPTESE 798
+++LQDLL F +P VMD K+G RT+L E++ A R D+YEKMV++ P AP E
Sbjct: 563 YLQLQDLLGDFEHPCVMDCKVGVRTYLESELAKAKERPKLRKDMYEKMVQVDPTAPNAEE 622
Score = 27.9 bits (59), Expect = 0.12
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +1
Query: 421 KSRSSEWFQLAGHPGSL-APAGPGTVWKR 504
K + W QLAGH G+ A PGT+ K+
Sbjct: 470 KKQRYPWVQLAGHQGNFRAGPTPGTILKK 498
>AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin
protein.
Length = 339
Score = 24.6 bits (51), Expect = 1.1
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +3
Query: 276 QALASHHAARGTRSHANSYGTSCTAFGTV 362
+A H RG R A YG++ + GT+
Sbjct: 254 RARMGFHGMRGKRDAAGIYGSNSSTVGTI 282
>AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin
protein.
Length = 301
Score = 24.6 bits (51), Expect = 1.1
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +3
Query: 276 QALASHHAARGTRSHANSYGTSCTAFGTV 362
+A H RG R A YG++ + GT+
Sbjct: 254 RARMGFHGMRGKRDAAGIYGSNSSTVGTI 282
>AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II
protein.
Length = 190
Score = 23.4 bits (48), Expect = 2.5
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +1
Query: 418 LKSRSSEWFQLAGHPGSLAP 477
++ + WF AG PG L+P
Sbjct: 62 VQGEAQAWFGFAGTPGYLSP 81
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 23.0 bits (47), Expect = 3.3
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +2
Query: 506 VLRATTPATTLNEMLTKPLQLVLICVALFLAT 601
VLRA+TPA + E + +++++ FL T
Sbjct: 1107 VLRASTPAPVVLEAVHASRRVLIVLTRNFLLT 1138
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.6 bits (46), Expect = 4.4
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = -2
Query: 461 GWPASWNHSDERDFSNASEAGADSSK 384
G+ H DE+ SN + G D S+
Sbjct: 178 GFKVDLRHMDEKSGSNVVDVGVDLSE 203
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.6 bits (46), Expect = 4.4
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = -2
Query: 461 GWPASWNHSDERDFSNASEAGADSSK 384
G+ H DE+ SN + G D S+
Sbjct: 178 GFKVDLRHMDEKSGSNVVDVGVDLSE 203
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 21.8 bits (44), Expect = 7.7
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +3
Query: 249 LAYQRWYPIQALASH 293
+ Y W+ IQA+A+H
Sbjct: 232 IIYSYWFIIQAVAAH 246
>AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength
rhodopsin protein.
Length = 154
Score = 21.8 bits (44), Expect = 7.7
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +3
Query: 249 LAYQRWYPIQALASH 293
+ Y W+ IQA+A+H
Sbjct: 108 IIYSYWFIIQAVAAH 122
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,349
Number of Sequences: 438
Number of extensions: 3943
Number of successful extensions: 17
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25731924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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