Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_J20
         (833 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0067 + 5364713-5364936,5365513-5367016,5367207-5368250,536...    31   1.5  
06_01_0559 - 3973261-3973778,3974694-3975591                           28   8.0  
05_01_0486 - 4047055-4049013                                           28   8.0  
02_02_0625 - 12339623-12339707,12339938-12340062,12340844-123409...    28   8.0  

>03_02_0067 + 5364713-5364936,5365513-5367016,5367207-5368250,
            5368467-5368577,5368997-5369068,5369719-5369737,
            5369838-5371142,5371317-5371397,5372441-5372604,
            5373363-5373466,5373537-5373628,5374079-5374216,
            5374370-5374426,5374820-5375046
          Length = 1713

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 8/35 (22%), Positives = 21/35 (60%)
 Frame = -3

Query: 564  VLWLWQETNKSSIKNKTYSDYKSNKHKCTIWIVFH 460
            + W+W +  +S  +N+  +  + +   C++W++FH
Sbjct: 1581 ICWIWNKMKRSKQENELSNQDEKDLVICSLWLLFH 1615


>06_01_0559 - 3973261-3973778,3974694-3975591
          Length = 471

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 12/54 (22%), Positives = 23/54 (42%)
 Frame = +1

Query: 364 ENNEQKQAEIYGKMAAISGVGITLGPMIGGHIMEDNPNGAFMFIAFIVGICFIF 525
           + N +  A +   +     VG  LGP++ G+I     N  F  +   + +  +F
Sbjct: 401 KGNSRALATVSAIIDGTGSVGAALGPLLTGYISTRGWNSVFFMLIVSISLALVF 454


>05_01_0486 - 4047055-4049013
          Length = 652

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 16/54 (29%), Positives = 27/54 (50%)
 Frame = +1

Query: 652 FVVLYSINWSKYWDIFLYKALXGFAMGVYYXNYAXYLKTTYDLSPKYVGYVISF 813
           +V LYSIN+     +F  ++L G      Y  Y+  +     LS   +G+++SF
Sbjct: 590 YVFLYSINYL----VFDLRSLSGPVSATLYLGYSLIMALAIMLSTGAIGFLLSF 639


>02_02_0625 -
           12339623-12339707,12339938-12340062,12340844-12340996,
           12342037-12342102,12343374-12343443,12343523-12343593,
           12343664-12343795,12344042-12344130,12344189-12344270,
           12344743-12344811,12345641-12345730,12345856-12345918,
           12346158-12346217
          Length = 384

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 16/38 (42%), Positives = 23/38 (60%)
 Frame = -1

Query: 713 KALYKKMSQYLDQFMLYNTTNDCLKLLKSDNTKFSERT 600
           KA+ KKMS  + Q +L N    CL  L+ D++K S+ T
Sbjct: 295 KAIVKKMSSEVVQLLLANAYQVCLH-LECDSSKDSDTT 331


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,639,300
Number of Sequences: 37544
Number of extensions: 442039
Number of successful extensions: 1005
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 975
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1005
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2303447664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)