Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_J20
(833 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC006242-1|AAH06242.1| 474|Homo sapiens major facilitator super... 101 3e-21
AK075376-1|BAC11577.1| 474|Homo sapiens protein ( Homo sapiens ... 100 1e-20
AC007239-2|AAX88847.1| 375|Homo sapiens unknown protein. 66 2e-10
BC009310-1|AAH09310.2| 305|Homo sapiens MFSD9 protein protein. 50 1e-05
BC015571-1|AAH15571.1| 424|Homo sapiens solute carrier family 2... 46 1e-04
AF070479-1|AAC23505.1| 424|Homo sapiens efflux transporter like... 46 1e-04
AF059663-1|AAC14725.1| 424|Homo sapiens tumor suppressing STF c... 46 1e-04
AF037064-1|AAC04787.1| 424|Homo sapiens organic cation transpor... 46 1e-04
AF028738-1|AAB82727.1| 408|Homo sapiens imprinted multi-membran... 46 1e-04
AB012083-1|BAA32779.1| 408|Homo sapiens ITM protein. 46 1e-04
L11669-1|AAA36729.1| 455|Homo sapiens tetracycline transporter-... 46 2e-04
BC014979-1|AAH14979.1| 455|Homo sapiens tetracycline transporte... 46 2e-04
BC001502-1|AAH01502.1| 455|Homo sapiens tetracycline transporte... 46 2e-04
AL390065-4|CAM21300.1| 455|Homo sapiens tetracycline transporte... 46 2e-04
AF030302-1|AAC17492.1| 424|Homo sapiens p45-BWR1A protein. 44 5e-04
AC007251-1|AAY14910.1| 99|Homo sapiens unknown protein. 40 0.011
BC039257-1|AAH39257.1| 1391|Homo sapiens nucleoporin 155kDa prot... 31 6.8
AJ007558-1|CAA07553.1| 1391|Homo sapiens nucleoporin 155 protein. 31 6.8
AF165926-1|AAD52966.1| 1332|Homo sapiens NUP155 protein. 31 6.8
AB018334-1|BAA34511.2| 1357|Homo sapiens KIAA0791 protein protein. 31 6.8
>BC006242-1|AAH06242.1| 474|Homo sapiens major facilitator
superfamily domain containing 9 protein.
Length = 474
Score = 101 bits (242), Expect = 3e-21
Identities = 80/290 (27%), Positives = 131/290 (45%), Gaps = 19/290 (6%)
Frame = +1
Query: 19 ICTYVPYVPT*DLLAVGLIIPLVPGHVRKMGANHIYVGLLGSIYAGFQLGSGPLIGSLSD 198
+C Y+ V DL V +++PL+ HV+ +GA+ G++GS Y QL S L+G SD
Sbjct: 47 LCLYL--VGFLDLFGVSMVVPLLSLHVKSLGASPTVAGIVGSSYGILQLFSSTLVGCWSD 104
Query: 199 LKGRRXXXXXXXXXCSVAYTVLGLTXXXXXXXXXXXXXXXXKQTQMLAKALVPDYENNEQ 378
+ GRR ++ Y +LG K T +++AL+ D E+
Sbjct: 105 VVGRRSSLLACILLSALGYLLLGAATNVFLFVLARVPAGIFKHTLSISRALLSDVVP-EK 163
Query: 379 KQAEIYGKMAAISGVGITLGPMIGGHIMEDNPN---GAFM-FIAFIV--GICFIF---NA 531
++ + G SGVG LGP++GG++ E AF+ F+ FI+ G+ + F A
Sbjct: 164 ERPLVIGHFNTASGVGFILGPVVGGYLTELEDGFYLTAFICFLVFILNAGLVWFFPWREA 223
Query: 532 ALVCFLXXXXXXXXXXXXXXXXDVLSENLVLSLFNSFKQSF-----VVLYSIN-----WS 681
D + E + K++ VVL N +S
Sbjct: 224 KPGSTEKGLPLRKTHVLLGRSHDTVQEAATSRRARASKKTAQPWVEVVLALRNMKNLLFS 283
Query: 682 KYWDIFLYKALXGFAMGVYYXNYAXYLKTTYDLSPKYVGYVISFQGVMGS 831
+ WDIFL + L A+ +YY N+ L+ + + PK GY+IS+ ++G+
Sbjct: 284 EMWDIFLVRLLMAMAVMLYYSNFVLALEERFGVRPKVTGYLISYSSMLGA 333
>AK075376-1|BAC11577.1| 474|Homo sapiens protein ( Homo sapiens
cDNA PSEC0066 fis, clone NT2RP2001087, weakly similar to
TETRACYCLINE RESISTANCE PROTEIN. ).
Length = 474
Score = 99.5 bits (237), Expect = 1e-20
Identities = 80/290 (27%), Positives = 130/290 (44%), Gaps = 19/290 (6%)
Frame = +1
Query: 19 ICTYVPYVPT*DLLAVGLIIPLVPGHVRKMGANHIYVGLLGSIYAGFQLGSGPLIGSLSD 198
+C Y+ V DL V +++PL+ HV+ +GA+ G++GS Y QL S L+G SD
Sbjct: 47 LCLYL--VGFLDLFGVSMVVPLLSLHVKSLGASPTVAGIVGSSYGILQLFSSTLVGCWSD 104
Query: 199 LKGRRXXXXXXXXXCSVAYTVLGLTXXXXXXXXXXXXXXXXKQTQMLAKALVPDYENNEQ 378
+ GRR ++ Y +LG K T +++AL+ D E+
Sbjct: 105 VVGRRSSLLACILLSALGYLLLGAATNVFLFVLARVPAGIFKHTLSISRALLSDVVP-EK 163
Query: 379 KQAEIYGKMAAISGVGITLGPMIGGHIMEDNPN---GAFM-FIAFIV--GICFIF---NA 531
++ + G SGVG LGP++GG+ E AF+ F+ FI+ G+ + F A
Sbjct: 164 ERPLVIGHFNTASGVGFILGPVVGGYPTELEDGFYLTAFICFLVFILNAGLVWFFPWREA 223
Query: 532 ALVCFLXXXXXXXXXXXXXXXXDVLSENLVLSLFNSFKQSF-----VVLYSIN-----WS 681
D + E + K++ VVL N +S
Sbjct: 224 KPGSTEKGLPLRKTHVLLGRSHDTVQEAATSRRARASKKTAQPWVEVVLALRNMRNLLFS 283
Query: 682 KYWDIFLYKALXGFAMGVYYXNYAXYLKTTYDLSPKYVGYVISFQGVMGS 831
+ WDIFL + L A+ +YY N+ L+ + + PK GY+IS+ ++G+
Sbjct: 284 EMWDIFLVRLLMAMAVMLYYSNFVLALEERFGVRPKVTGYLISYSSMLGA 333
>AC007239-2|AAX88847.1| 375|Homo sapiens unknown protein.
Length = 375
Score = 65.7 bits (153), Expect = 2e-10
Identities = 60/235 (25%), Positives = 99/235 (42%), Gaps = 19/235 (8%)
Frame = +1
Query: 184 GSLSDLKGRRXXXXXXXXXCSVAYTVLGLTXXXXXXXXXXXXXXXXKQTQMLAKALVPDY 363
G SD+ GRR ++ Y +LG K T +++AL+ D
Sbjct: 1 GCWSDVVGRRSSLLACILLSALGYLLLGAATNVFLFVLARVPAGIFKHTLSISRALLSDV 60
Query: 364 ENNEQKQAEIYGKMAAISGVGITLGPMIGGHIMEDNPN---GAFM-FIAFIV--GICFIF 525
E+++ + G SGVG LGP++GG++ E AF+ F+ FI+ G+ + F
Sbjct: 61 VP-EKERPLVIGHFNTASGVGFILGPVVGGYLTELEDGFYLTAFICFLVFILNAGLVWFF 119
Query: 526 ---NAALVCFLXXXXXXXXXXXXXXXXDVLSENLVLSLFNSFKQSF-----VVLYSIN-- 675
A D + E + K++ VVL N
Sbjct: 120 PWREAKPGSTEKGLPLRKTHVLLGRSHDTVQEAATSRRARASKKTAQPWVEVVLALRNMK 179
Query: 676 ---WSKYWDIFLYKALXGFAMGVYYXNYAXYLKTTYDLSPKYVGYVISFQGVMGS 831
+S+ WDIFL + L A+ +YY N+ L+ + + PK GY+IS+ ++G+
Sbjct: 180 NLLFSEMWDIFLVRLLMAMAVMLYYSNFVLALEERFGVRPKVTGYLISYSSMLGA 234
>BC009310-1|AAH09310.2| 305|Homo sapiens MFSD9 protein protein.
Length = 305
Score = 49.6 bits (113), Expect = 1e-05
Identities = 19/52 (36%), Positives = 33/52 (63%)
Frame = +1
Query: 676 WSKYWDIFLYKALXGFAMGVYYXNYAXYLKTTYDLSPKYVGYVISFQGVMGS 831
+S+ WDIFL + L A+ +YY N+ L+ + + PK GY+IS+ ++G+
Sbjct: 113 FSEMWDIFLVRLLMAMAVMLYYSNFVLALEERFGVRPKVTGYLISYSSMLGA 164
Score = 41.1 bits (92), Expect = 0.005
Identities = 22/50 (44%), Positives = 27/50 (54%)
Frame = +1
Query: 397 GKMAAISGVGITLGPMIGGHIMEDNPNGAFMFIAFIVGICFIFNAALVCF 546
G SGVG LGP++GG++ E F AFI + FI NA LV F
Sbjct: 1 GHFNTASGVGFILGPVVGGYLTE--LEDGFYLTAFICFLVFILNAGLVWF 48
>BC015571-1|AAH15571.1| 424|Homo sapiens solute carrier family 22
(organic cation transporter), member 18 protein.
Length = 424
Score = 46.4 bits (105), Expect = 1e-04
Identities = 32/141 (22%), Positives = 57/141 (40%), Gaps = 4/141 (2%)
Frame = +1
Query: 52 DLLAVGLIIPLVPGHVRKMGANHIYVGLLGSIYAGFQLGSGPLIGSLSDLKGRRXXXXXX 231
+L + + +VP RK+G + I G L + + QL GP+ G +D +G R
Sbjct: 36 ELTCLFMQFSIVPYLSRKLGLDSIAFGYLQTTFGVLQLLGGPVFGRFADQRGARAALTLS 95
Query: 232 XXXCSVAYTVLGLTXX----XXXXXXXXXXXXXXKQTQMLAKALVPDYENNEQKQAEIYG 399
Y +L T A+ ++ D E++ A + G
Sbjct: 96 FLAALALYLLLAAASSPALPGVYLLFASRLPGALMHTLPAAQMVITDLSAPEERPAAL-G 154
Query: 400 KMAAISGVGITLGPMIGGHIM 462
++ GVG+ LG ++GG ++
Sbjct: 155 RLGLCFGVGVILGSLLGGTLV 175
>AF070479-1|AAC23505.1| 424|Homo sapiens efflux transporter like
protein protein.
Length = 424
Score = 46.4 bits (105), Expect = 1e-04
Identities = 32/141 (22%), Positives = 57/141 (40%), Gaps = 4/141 (2%)
Frame = +1
Query: 52 DLLAVGLIIPLVPGHVRKMGANHIYVGLLGSIYAGFQLGSGPLIGSLSDLKGRRXXXXXX 231
+L + + +VP RK+G + I G L + + QL GP+ G +D +G R
Sbjct: 36 ELTCLFMQFSIVPYLSRKLGLDSIAFGYLQTTFGVLQLLGGPVFGRFADQRGARAALTLS 95
Query: 232 XXXCSVAYTVLGLTXX----XXXXXXXXXXXXXXKQTQMLAKALVPDYENNEQKQAEIYG 399
Y +L T A+ ++ D E++ A + G
Sbjct: 96 FLAALALYLLLAAASSPALPGVYLLFASRLPGALMHTLPAAQMVITDLSAPEERPAAL-G 154
Query: 400 KMAAISGVGITLGPMIGGHIM 462
++ GVG+ LG ++GG ++
Sbjct: 155 RLGLCFGVGVILGSLLGGTLV 175
>AF059663-1|AAC14725.1| 424|Homo sapiens tumor suppressing STF cDNA
5 protein.
Length = 424
Score = 46.4 bits (105), Expect = 1e-04
Identities = 32/141 (22%), Positives = 57/141 (40%), Gaps = 4/141 (2%)
Frame = +1
Query: 52 DLLAVGLIIPLVPGHVRKMGANHIYVGLLGSIYAGFQLGSGPLIGSLSDLKGRRXXXXXX 231
+L + + +VP RK+G + I G L + + QL GP+ G +D +G R
Sbjct: 36 ELTCLFMQFSIVPYLSRKLGLDSIAFGYLQTTFGVLQLLGGPVFGRFADQRGARAALTLS 95
Query: 232 XXXCSVAYTVLGLTXX----XXXXXXXXXXXXXXKQTQMLAKALVPDYENNEQKQAEIYG 399
Y +L T A+ ++ D E++ A + G
Sbjct: 96 FLAALALYLLLAAASSPALPGVYLLFASRLPGALMHTLPAAQMVITDLSAPEERPAAL-G 154
Query: 400 KMAAISGVGITLGPMIGGHIM 462
++ GVG+ LG ++GG ++
Sbjct: 155 RLGLCFGVGVILGSLLGGTLV 175
>AF037064-1|AAC04787.1| 424|Homo sapiens organic cation
transporter-like protein 2 protein.
Length = 424
Score = 46.4 bits (105), Expect = 1e-04
Identities = 32/141 (22%), Positives = 57/141 (40%), Gaps = 4/141 (2%)
Frame = +1
Query: 52 DLLAVGLIIPLVPGHVRKMGANHIYVGLLGSIYAGFQLGSGPLIGSLSDLKGRRXXXXXX 231
+L + + +VP RK+G + I G L + + QL GP+ G +D +G R
Sbjct: 36 ELTCLFMQFSIVPYLSRKLGLDSIAFGYLQTTFGVLQLLGGPVFGRFADQRGARAALTLS 95
Query: 232 XXXCSVAYTVLGLTXX----XXXXXXXXXXXXXXKQTQMLAKALVPDYENNEQKQAEIYG 399
Y +L T A+ ++ D E++ A + G
Sbjct: 96 FLAALALYLLLAAASSPALPGVYLLFASRLPGALMHTLPAAQMVITDLSAPEERPAAL-G 154
Query: 400 KMAAISGVGITLGPMIGGHIM 462
++ GVG+ LG ++GG ++
Sbjct: 155 RLGLCFGVGVILGSLLGGTLV 175
>AF028738-1|AAB82727.1| 408|Homo sapiens imprinted multi-membrane
spanning polyspecific transporter-related protein
protein.
Length = 408
Score = 46.4 bits (105), Expect = 1e-04
Identities = 32/141 (22%), Positives = 57/141 (40%), Gaps = 4/141 (2%)
Frame = +1
Query: 52 DLLAVGLIIPLVPGHVRKMGANHIYVGLLGSIYAGFQLGSGPLIGSLSDLKGRRXXXXXX 231
+L + + +VP RK+G + I G L + + QL GP+ G +D +G R
Sbjct: 20 ELTCLFMQFSIVPYLSRKLGLDSIAFGYLQTTFGVLQLLGGPVFGRFADQRGARAALTLS 79
Query: 232 XXXCSVAYTVLGLTXX----XXXXXXXXXXXXXXKQTQMLAKALVPDYENNEQKQAEIYG 399
Y +L T A+ ++ D E++ A + G
Sbjct: 80 FLAALALYLLLAAASSPALPGVYLLFASRLPGALMHTLPAAQMVITDLSAPEERPAAL-G 138
Query: 400 KMAAISGVGITLGPMIGGHIM 462
++ GVG+ LG ++GG ++
Sbjct: 139 RLGLCFGVGVILGSLLGGTLV 159
>AB012083-1|BAA32779.1| 408|Homo sapiens ITM protein.
Length = 408
Score = 46.4 bits (105), Expect = 1e-04
Identities = 32/141 (22%), Positives = 57/141 (40%), Gaps = 4/141 (2%)
Frame = +1
Query: 52 DLLAVGLIIPLVPGHVRKMGANHIYVGLLGSIYAGFQLGSGPLIGSLSDLKGRRXXXXXX 231
+L + + +VP RK+G + I G L + + QL GP+ G +D +G R
Sbjct: 20 ELTCLFMQFSIVPYLSRKLGLDSIAFGYLQTTFGVLQLLGGPVFGRFADQRGARAALTLS 79
Query: 232 XXXCSVAYTVLGLTXX----XXXXXXXXXXXXXXKQTQMLAKALVPDYENNEQKQAEIYG 399
Y +L T A+ ++ D E++ A + G
Sbjct: 80 FLAALALYLLLAAASSPALPGVYLLFASRLPGALMHTLPAAQMVITDLSAPEERPAAL-G 138
Query: 400 KMAAISGVGITLGPMIGGHIM 462
++ GVG+ LG ++GG ++
Sbjct: 139 RLGLCFGVGVILGSLLGGTLV 159
>L11669-1|AAA36729.1| 455|Homo sapiens tetracycline
transporter-like protein protein.
Length = 455
Score = 45.6 bits (103), Expect = 2e-04
Identities = 36/144 (25%), Positives = 59/144 (40%), Gaps = 1/144 (0%)
Frame = +1
Query: 97 VRKMGANHIYVGLLGSIYAGFQLGSGPLIGSLSDLKGRRXXXXXXXXXCSVAYTVLGLTX 276
V K + ++ GL+GS ++ Q PL G+ SD GRR + +Y V +
Sbjct: 79 VEKRYNSVLFGGLIGSAFSVLQFLCAPLTGATSDCLGRRPVMLLCLMGVATSYAVWATSR 138
Query: 277 XXXXXXXXXXXXXXXKQTQMLAKALVPDYENNEQKQAEIYGKMAAISGVGITLGPMIGGH 456
K L+ A+V D + +++ + +G TLGPM+G
Sbjct: 139 SFAAFLASRLIGGISKGNVSLSTAIVADL-GSPLARSQGMAVIGVAFSLGFTLGPMLGAS 197
Query: 457 I-MEDNPNGAFMFIAFIVGICFIF 525
+ +E P A +F A + F F
Sbjct: 198 LPLEMAPWFALLFAASDLLFIFCF 221
>BC014979-1|AAH14979.1| 455|Homo sapiens tetracycline
transporter-like protein protein.
Length = 455
Score = 45.6 bits (103), Expect = 2e-04
Identities = 36/144 (25%), Positives = 59/144 (40%), Gaps = 1/144 (0%)
Frame = +1
Query: 97 VRKMGANHIYVGLLGSIYAGFQLGSGPLIGSLSDLKGRRXXXXXXXXXCSVAYTVLGLTX 276
V K + ++ GL+GS ++ Q PL G+ SD GRR + +Y V +
Sbjct: 79 VEKRYNSVLFGGLIGSAFSVLQFLCAPLTGATSDCLGRRPVMLLCLMGVATSYAVWATSR 138
Query: 277 XXXXXXXXXXXXXXXKQTQMLAKALVPDYENNEQKQAEIYGKMAAISGVGITLGPMIGGH 456
K L+ A+V D + +++ + +G TLGPM+G
Sbjct: 139 SFAAFLASRLIGGISKGNVSLSTAIVADL-GSPLARSQGMAVIGVAFSLGFTLGPMLGAS 197
Query: 457 I-MEDNPNGAFMFIAFIVGICFIF 525
+ +E P A +F A + F F
Sbjct: 198 LPLEMAPWFALLFAASDLLFIFCF 221
>BC001502-1|AAH01502.1| 455|Homo sapiens tetracycline
transporter-like protein protein.
Length = 455
Score = 45.6 bits (103), Expect = 2e-04
Identities = 36/144 (25%), Positives = 59/144 (40%), Gaps = 1/144 (0%)
Frame = +1
Query: 97 VRKMGANHIYVGLLGSIYAGFQLGSGPLIGSLSDLKGRRXXXXXXXXXCSVAYTVLGLTX 276
V K + ++ GL+GS ++ Q PL G+ SD GRR + +Y V +
Sbjct: 79 VEKRYNSVLFGGLIGSAFSVLQFLCAPLTGATSDCLGRRPVMLLCLMGVATSYAVWATSR 138
Query: 277 XXXXXXXXXXXXXXXKQTQMLAKALVPDYENNEQKQAEIYGKMAAISGVGITLGPMIGGH 456
K L+ A+V D + +++ + +G TLGPM+G
Sbjct: 139 SFAAFLASRLIGGISKGNVSLSTAIVADL-GSPLARSQGMAVIGVAFSLGFTLGPMLGAS 197
Query: 457 I-MEDNPNGAFMFIAFIVGICFIF 525
+ +E P A +F A + F F
Sbjct: 198 LPLEMAPWFALLFAASDLLFIFCF 221
>AL390065-4|CAM21300.1| 455|Homo sapiens tetracycline
transporter-like protein protein.
Length = 455
Score = 45.6 bits (103), Expect = 2e-04
Identities = 36/144 (25%), Positives = 59/144 (40%), Gaps = 1/144 (0%)
Frame = +1
Query: 97 VRKMGANHIYVGLLGSIYAGFQLGSGPLIGSLSDLKGRRXXXXXXXXXCSVAYTVLGLTX 276
V K + ++ GL+GS ++ Q PL G+ SD GRR + +Y V +
Sbjct: 79 VEKRYNSVLFGGLIGSAFSVLQFLCAPLTGATSDCLGRRPVMLLCLMGVATSYAVWATSR 138
Query: 277 XXXXXXXXXXXXXXXKQTQMLAKALVPDYENNEQKQAEIYGKMAAISGVGITLGPMIGGH 456
K L+ A+V D + +++ + +G TLGPM+G
Sbjct: 139 SFAAFLASRLIGGISKGNVSLSTAIVADL-GSPLARSQGMAVIGVAFSLGFTLGPMLGAS 197
Query: 457 I-MEDNPNGAFMFIAFIVGICFIF 525
+ +E P A +F A + F F
Sbjct: 198 LPLEMAPWFALLFAASDLLFIFCF 221
>AF030302-1|AAC17492.1| 424|Homo sapiens p45-BWR1A protein.
Length = 424
Score = 44.4 bits (100), Expect = 5e-04
Identities = 31/141 (21%), Positives = 57/141 (40%), Gaps = 4/141 (2%)
Frame = +1
Query: 52 DLLAVGLIIPLVPGHVRKMGANHIYVGLLGSIYAGFQLGSGPLIGSLSDLKGRRXXXXXX 231
+L + + +VP RK+G + I G L + + QL GP+ G ++ +G R
Sbjct: 36 ELTCLFMQFSIVPYLSRKLGLDSIAFGYLQTTFGVLQLLGGPVFGRFANQRGARAALTLS 95
Query: 232 XXXCSVAYTVLGLTXX----XXXXXXXXXXXXXXKQTQMLAKALVPDYENNEQKQAEIYG 399
Y +L T A+ ++ D E++ A + G
Sbjct: 96 FLAALALYLLLAAASSPALPGVYLLFASRLPGALMHTLPAAQMVITDLSAPEERPAAL-G 154
Query: 400 KMAAISGVGITLGPMIGGHIM 462
++ GVG+ LG ++GG ++
Sbjct: 155 RLGLCFGVGVILGSLLGGTLV 175
>AC007251-1|AAY14910.1| 99|Homo sapiens unknown protein.
Length = 99
Score = 39.9 bits (89), Expect = 0.011
Identities = 20/55 (36%), Positives = 32/55 (58%)
Frame = +1
Query: 19 ICTYVPYVPT*DLLAVGLIIPLVPGHVRKMGANHIYVGLLGSIYAGFQLGSGPLI 183
+C Y+ V DL V +++PL+ HV+ +GA+ G++GS Y QL S L+
Sbjct: 47 LCLYL--VGFLDLFGVSMVVPLLSLHVKSLGASPTVAGIVGSSYGILQLFSSTLV 99
>BC039257-1|AAH39257.1| 1391|Homo sapiens nucleoporin 155kDa
protein.
Length = 1391
Score = 30.7 bits (66), Expect = 6.8
Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Frame = +1
Query: 55 LLAVGLIIP---LVPGHVRKMG--ANHIYVGLLGSIYAGFQLGSGPLIGSLS 195
+LAVGL+ P + HVR + A + + +LG YA Q GSG L SLS
Sbjct: 144 ILAVGLVKPKAGIFQPHVRHLLVLATPVDIVILGLSYANLQTGSGVLNDSLS 195
>AJ007558-1|CAA07553.1| 1391|Homo sapiens nucleoporin 155 protein.
Length = 1391
Score = 30.7 bits (66), Expect = 6.8
Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Frame = +1
Query: 55 LLAVGLIIP---LVPGHVRKMG--ANHIYVGLLGSIYAGFQLGSGPLIGSLS 195
+LAVGL+ P + HVR + A + + +LG YA Q GSG L SLS
Sbjct: 144 ILAVGLVKPKAGIFQPHVRHLLVLATPVDIVILGLSYANLQTGSGVLNDSLS 195
>AF165926-1|AAD52966.1| 1332|Homo sapiens NUP155 protein.
Length = 1332
Score = 30.7 bits (66), Expect = 6.8
Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Frame = +1
Query: 55 LLAVGLIIP---LVPGHVRKMG--ANHIYVGLLGSIYAGFQLGSGPLIGSLS 195
+LAVGL+ P + HVR + A + + +LG YA Q GSG L SLS
Sbjct: 85 ILAVGLVKPKAGIFQPHVRHLLVLATPVDIVILGLSYANLQTGSGVLNDSLS 136
>AB018334-1|BAA34511.2| 1357|Homo sapiens KIAA0791 protein protein.
Length = 1357
Score = 30.7 bits (66), Expect = 6.8
Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Frame = +1
Query: 55 LLAVGLIIP---LVPGHVRKMG--ANHIYVGLLGSIYAGFQLGSGPLIGSLS 195
+LAVGL+ P + HVR + A + + +LG YA Q GSG L SLS
Sbjct: 110 ILAVGLVKPKAGIFQPHVRHLLVLATPVDIVILGLSYANLQTGSGVLNDSLS 161
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,902,519
Number of Sequences: 237096
Number of extensions: 2827894
Number of successful extensions: 8193
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 7838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8180
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10482413384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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