Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_J20
         (833 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40945-2|AAA81720.1|  445|Caenorhabditis elegans Hypothetical pr...    39   0.004
U67949-9|AAM69108.1|  486|Caenorhabditis elegans Hypothetical pr...    31   0.77 
U67949-8|AAD32274.1|  626|Caenorhabditis elegans Hypothetical pr...    31   0.77 
AF077539-1|AAK84580.2|  550|Caenorhabditis elegans Hypothetical ...    29   3.1  
Z81487-3|CAB03997.2|  345|Caenorhabditis elegans Hypothetical pr...    29   5.4  

>U40945-2|AAA81720.1|  445|Caenorhabditis elegans Hypothetical
           protein F10D7.2 protein.
          Length = 445

 Score = 39.1 bits (87), Expect = 0.004
 Identities = 30/110 (27%), Positives = 45/110 (40%), Gaps = 1/110 (0%)
 Frame = +1

Query: 130 GLLGSIYAGFQLGSGPLIGSLSDLKGRRXXXXXXXXXCSVAYTVLGLTXXXXXXXXXXXX 309
           G LGS+++  Q  S P +GSLSD+ GRR           ++Y                  
Sbjct: 80  GFLGSLFSALQFISSPTLGSLSDIYGRRAVISLCCIMTFISYVNWLKADIFAYFVLSRIL 139

Query: 310 XXXXKQTQMLAKALVPDYENNEQKQAEIYGKMAAIS-GVGITLGPMIGGH 456
               K    +A A+V D  + E     +   +  IS  +G  +GPMIG +
Sbjct: 140 GGLSKGNINVATAIVSDVYSPEDHPKGM--ALIGISYSLGFLIGPMIGAY 187


>U67949-9|AAM69108.1|  486|Caenorhabditis elegans Hypothetical
           protein F55A4.8b protein.
          Length = 486

 Score = 31.5 bits (68), Expect = 0.77
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = +1

Query: 385 AEIYGKMAAISGVGITLGPMIGGHIMEDNPNGAFMFIAFIVGICFIFNAALVCFL 549
           A + G +   +G+G T GP+IGG   +    G F     ++GI  +  + L  FL
Sbjct: 214 AFVVGILETFAGLGYTAGPVIGGFFYD---IGGFQLPFLVLGIVLLVASVLAFFL 265


>U67949-8|AAD32274.1|  626|Caenorhabditis elegans Hypothetical
           protein F55A4.8a protein.
          Length = 626

 Score = 31.5 bits (68), Expect = 0.77
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = +1

Query: 385 AEIYGKMAAISGVGITLGPMIGGHIMEDNPNGAFMFIAFIVGICFIFNAALVCFL 549
           A + G +   +G+G T GP+IGG   +    G F     ++GI  +  + L  FL
Sbjct: 354 AFVVGILETFAGLGYTAGPVIGGFFYD---IGGFQLPFLVLGIVLLVASVLAFFL 405


>AF077539-1|AAK84580.2|  550|Caenorhabditis elegans Hypothetical
           protein T25D3.4 protein.
          Length = 550

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 24/115 (20%), Positives = 47/115 (40%)
 Frame = +1

Query: 169 SGPLIGSLSDLKGRRXXXXXXXXXCSVAYTVLGLTXXXXXXXXXXXXXXXXKQTQMLAKA 348
           S PL+G+LSD+ GR+           +    L ++                  + +L  A
Sbjct: 126 SAPLVGALSDVWGRKAFLILTVLCTCMPIPCLKISPWWYFSLFSLSGLFSVTFSVIL--A 183

Query: 349 LVPDYENNEQKQAEIYGKMAAISGVGITLGPMIGGHIMEDNPNGAFMFIAFIVGI 513
            V D   ++ +++  YG ++A     +   P +G +I E   +   + +A IV +
Sbjct: 184 YVADI-TDKSERSSAYGLVSATFAASLVTSPALGAYISEVYGDSLVVLLATIVSV 237


>Z81487-3|CAB03997.2|  345|Caenorhabditis elegans Hypothetical
           protein C54E10.4 protein.
          Length = 345

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 6/43 (13%)
 Frame = +1

Query: 439 PMIGGHIMEDN------PNGAFMFIAFIVGICFIFNAALVCFL 549
           P+ GG+I+E+N       + +     FI   CF+ +AAL CF+
Sbjct: 74  PLAGGYILEENFRRFVSTHASLTIWVFI--FCFVLSAALTCFV 114


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,390,614
Number of Sequences: 27780
Number of extensions: 423902
Number of successful extensions: 966
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 963
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2072006206
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)