Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_J19
         (682 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    25   0.76 
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    25   0.76 
AY052395-1|AAL15469.1|   76|Tribolium castaneum tryptophan oxyge...    24   1.3  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   3.1  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    22   4.0  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   4.0  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   9.3  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   9.3  

>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 24.6 bits (51), Expect = 0.76
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +1

Query: 403 VESEFLTFGTHYIFLVSFRQRIYEIERTRRL 495
           V  E L   TH  + + F+Q IYE++  R +
Sbjct: 48  VHDEHLFIVTHQAYELWFKQIIYELDSIRNI 78


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 24.6 bits (51), Expect = 0.76
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +1

Query: 403 VESEFLTFGTHYIFLVSFRQRIYEIERTRRL 495
           V  E L   TH  + + F+Q IYE++  R +
Sbjct: 48  VHDEHLFIVTHQAYELWFKQIIYELDSIRNI 78


>AY052395-1|AAL15469.1|   76|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 76

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +1

Query: 403 VESEFLTFGTHYIFLVSFRQRIYEIERTR 489
           V  E L   TH  + + F+Q IYE++  R
Sbjct: 48  VHDEHLFIVTHQAYELWFKQIIYELDSIR 76


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -1

Query: 364 SCCVCPCDLSYV 329
           SC VC CD  Y+
Sbjct: 773 SCTVCTCDAKYL 784


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +2

Query: 530 QGNLK*EFGFHYTENGDKLLHVC 598
           +GNLK   G H  +   ++LH C
Sbjct: 175 KGNLKTHMGVHRAKPPMRVLHQC 197


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = -1

Query: 460 DEMIQEKYNVYQMSRILIQQLYVISNFKLSISSCCVCPC 344
           D ++ EK NV  +   ++  L V  NF   +S   +C C
Sbjct: 238 DTIMYEKTNVTFVHLAVLNILRVGKNFVCLLSLIILCDC 276


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 5/15 (33%), Positives = 12/15 (80%)
 Frame = +2

Query: 551 FGFHYTENGDKLLHV 595
           +G+HY+ +G ++ H+
Sbjct: 391 YGYHYSGDGGEVAHL 405


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 5/15 (33%), Positives = 12/15 (80%)
 Frame = +2

Query: 551 FGFHYTENGDKLLHV 595
           +G+HY+ +G ++ H+
Sbjct: 339 YGYHYSGDGGEVAHL 353


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,051
Number of Sequences: 336
Number of extensions: 3643
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)