Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_J18
         (785 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding pr...    25   0.60 
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   3.2  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   9.8  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   9.8  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   9.8  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    21   9.8  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    21   9.8  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   9.8  

>AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding
           protein protein.
          Length = 135

 Score = 25.4 bits (53), Expect = 0.60
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = -3

Query: 192 NIYNLIRQSNTLLYNTRFCIFSENVLVSHISLN 94
           N +    Q N  L  TR   FS+N L+ HIS N
Sbjct: 90  NTFKTETQVNDSLKVTRLYEFSDNELLVHISTN 122


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -3

Query: 360  GLKFCHTGPAASANSLVLAYFMPISAC 280
            GL+F    P  S+ +  +A   P+ AC
Sbjct: 1031 GLRFLRAKPGKSSGAAAMASAAPMPAC 1057


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -3

Query: 735 PSFTSNIYPTG 703
           PS+T+NI+P G
Sbjct: 192 PSWTNNIFPRG 202


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -3

Query: 735 PSFTSNIYPTG 703
           PS+T+NI+P G
Sbjct: 207 PSWTNNIFPRG 217


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
            protein.
          Length = 1308

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = +2

Query: 425  TKFTSTGIPIKVIEQQQREMKNAEDNEKKDIQN 523
            T  T+   P+KV  QQQ +    +  ++  + N
Sbjct: 961  TNLTTILPPVKVQSQQQSQQSQQQQQQQTIVTN 993


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -3

Query: 735 PSFTSNIYPTG 703
           PS+T+NI+P G
Sbjct: 95  PSWTNNIFPKG 105


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +2

Query: 689 IPSCVPVGYMFDVKLGAEEFGLEMP 763
           +P C P  ++FD+K       +E+P
Sbjct: 148 VPVCAPKLHVFDLKTSNHLKQIEIP 172


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 6/20 (30%), Positives = 13/20 (65%)
 Frame = +2

Query: 617 LIGEFTVTQFSLQDGVKNSY 676
           ++ +F + QF  ++G  N+Y
Sbjct: 482 IVNQFHILQFITKNGTSNNY 501


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,587
Number of Sequences: 438
Number of extensions: 3834
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24760908
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)