Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_J06
         (737 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY028784-1|AAK32958.2|  499|Anopheles gambiae cytochrome P450 pr...    25   1.8  
AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein ...    23   7.4  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    23   7.4  

>AY028784-1|AAK32958.2|  499|Anopheles gambiae cytochrome P450
           protein.
          Length = 499

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 2/92 (2%)
 Frame = -1

Query: 500 VFYPFSLLHTSIATFASLLHAIAFHPPLSLSNKHITTAI*N*SSD*LSLGCLNCFLFMKI 321
           VF+ F+   TS  T   +LH +A HP + L  +     +     + LS   +    ++  
Sbjct: 300 VFF-FAGFETSATTLTFVLHLLAKHPEVQLEGRECVRDVLAKHDNKLSYDAVMEMEYLGW 358

Query: 320 II--LINTSQFIACLHTVYLSDLKIQNGLQTP 231
           I+   +     +A LH +     ++ NG   P
Sbjct: 359 IVNETLRLYPPVATLHRITTQPYQLPNGAILP 390


>AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein
           protein.
          Length = 705

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 56  IYFHKVICSWEQDI 15
           I  HK++CSW+  I
Sbjct: 242 ILTHKIVCSWDYGI 255


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
 Frame = +2

Query: 407 WTTKVADERRLHAAEMRMLRWMCGVTRMDRIRNEY--VRGSLKVAPVTEKLRSARLGWY 577
           WT+ +AD RR   A  R+ +           R EY   R +LK     E  R+ +  WY
Sbjct: 280 WTSVIADLRRKSKAASRVAQRAYDTPEFPDKRREYKLARNALK----REIKRTKKATWY 334


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 730,565
Number of Sequences: 2352
Number of extensions: 13187
Number of successful extensions: 32
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75676146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)