Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_J04
(626 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75712-10|CAB00039.2| 332|Caenorhabditis elegans Hypothetical p... 124 7e-29
Z95559-9|CAI46625.1| 510|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z47067-3|CAA87330.2| 446|Caenorhabditis elegans Hypothetical pr... 33 0.13
Z81061-3|CAB02933.1| 232|Caenorhabditis elegans Hypothetical pr... 30 1.6
U25032-1|AAB18670.1| 1379|Caenorhabditis elegans par-3 protein. 29 2.1
U00067-5|ABD63219.1| 1340|Caenorhabditis elegans Abnormal embryo... 29 2.1
U00067-4|AAK73874.1| 1376|Caenorhabditis elegans Abnormal embryo... 29 2.1
U00067-3|AAK73875.1| 1379|Caenorhabditis elegans Abnormal embryo... 29 2.1
Z70308-1|CAA94351.1| 213|Caenorhabditis elegans Hypothetical pr... 28 6.3
U00052-2|AAK95881.1| 404|Caenorhabditis elegans Hypothetical pr... 28 6.3
AC006834-5|AAF40007.1| 451|Caenorhabditis elegans Hypothetical ... 28 6.3
U55363-8|AAA97966.1| 829|Caenorhabditis elegans Germinal center... 27 8.3
AF040655-7|AAB95044.2| 565|Caenorhabditis elegans Hypothetical ... 27 8.3
>Z75712-10|CAB00039.2| 332|Caenorhabditis elegans Hypothetical
protein K04G2.2 protein.
Length = 332
Score = 124 bits (298), Expect = 7e-29
Identities = 64/127 (50%), Positives = 79/127 (62%), Gaps = 2/127 (1%)
Frame = +3
Query: 252 IAAKLAFLPPEPTYAFTPDETGSKFSLTLTE-RAEWQYSEREKEN-IEGFYSRTTRGNKI 425
I +KLAF+PPEP+Y T D L L E RA W + E + N +E +RT R N++
Sbjct: 46 IVSKLAFMPPEPSYTITEDN-----KLVLIEGRAAWPHQEVDMANCVEMRITRTRRRNRV 100
Query: 426 ACLFVRCSPNARFTILFSHGNAVDLGQMSSFYLGLGTRINCNIFXXXXXXXXXXXXKPSX 605
AC +R PN+ FT+LFSHGNAVDLGQM+SF GLG +NCN+F KPS
Sbjct: 101 ACTMIRPLPNSHFTLLFSHGNAVDLGQMTSFLYGLGFHLNCNVFSYDYSGYGCSTGKPSE 160
Query: 606 KNLYADI 626
KNLYADI
Sbjct: 161 KNLYADI 167
>Z95559-9|CAI46625.1| 510|Caenorhabditis elegans Hypothetical
protein Y41E3.18 protein.
Length = 510
Score = 42.7 bits (96), Expect = 2e-04
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 8/89 (8%)
Frame = +3
Query: 384 IEGFYSRTTRGNKIACLFVRCSPN--ARFTILFSHGNAVDLGQMSSFYLGLGTRIN---- 545
+ GF +T NKI C++V C RFT+L+SH N DL S +G+ + I+
Sbjct: 241 VRGFVLKTKNKNKIGCVYVGCPDGFAPRFTLLYSHPNGSDL---SDHLIGIPSLIDIARF 297
Query: 546 --CNIFXXXXXXXXXXXXKPSXKNLYADI 626
C ++ S NLY+DI
Sbjct: 298 YRCEVYSYDYTGYGISGGIASESNLYSDI 326
>Z47067-3|CAA87330.2| 446|Caenorhabditis elegans Hypothetical
protein C43C3.3 protein.
Length = 446
Score = 33.5 bits (73), Expect = 0.13
Identities = 20/63 (31%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Frame = +3
Query: 315 GSKFSLTLTERAEWQYSERE---KENIEGFYSRTTRGNKIACLFVRCSPNARFTILFSHG 485
GS+ +TLT+ + +Y+E ++N + + +TTR N + CL+ R RF+ + S+G
Sbjct: 96 GSECDVTLTDLPKHRYAETTVVLEDNADLSFGKTTRLNHVFCLYTRNVKTIRFSDV-SNG 154
Query: 486 NAV 494
+ V
Sbjct: 155 HEV 157
>Z81061-3|CAB02933.1| 232|Caenorhabditis elegans Hypothetical
protein F14H8.4 protein.
Length = 232
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +2
Query: 203 FQRTLLPVLLSAMPRKNCGQVSISASRTNVCI 298
F RT PVL +A+P+ N + I+AS T+ I
Sbjct: 187 FHRTFCPVLTNAIPKPNAPPMRIAASPTSAQI 218
>U25032-1|AAB18670.1| 1379|Caenorhabditis elegans par-3 protein.
Length = 1379
Score = 29.5 bits (63), Expect = 2.1
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -3
Query: 75 RQQFHFCQPLL*ARRYDGG 19
+QQ H+ QPL AR++DGG
Sbjct: 165 KQQHHYAQPLPYARKFDGG 183
>U00067-5|ABD63219.1| 1340|Caenorhabditis elegans Abnormal embryonic
partitioningof cytoplasm protein 3, isoform c protein.
Length = 1340
Score = 29.5 bits (63), Expect = 2.1
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -3
Query: 75 RQQFHFCQPLL*ARRYDGG 19
+QQ H+ QPL AR++DGG
Sbjct: 129 KQQHHYAQPLPYARKFDGG 147
>U00067-4|AAK73874.1| 1376|Caenorhabditis elegans Abnormal embryonic
partitioningof cytoplasm protein 3, isoform a protein.
Length = 1376
Score = 29.5 bits (63), Expect = 2.1
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -3
Query: 75 RQQFHFCQPLL*ARRYDGG 19
+QQ H+ QPL AR++DGG
Sbjct: 165 KQQHHYAQPLPYARKFDGG 183
>U00067-3|AAK73875.1| 1379|Caenorhabditis elegans Abnormal embryonic
partitioningof cytoplasm protein 3, isoform b protein.
Length = 1379
Score = 29.5 bits (63), Expect = 2.1
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -3
Query: 75 RQQFHFCQPLL*ARRYDGG 19
+QQ H+ QPL AR++DGG
Sbjct: 165 KQQHHYAQPLPYARKFDGG 183
>Z70308-1|CAA94351.1| 213|Caenorhabditis elegans Hypothetical
protein F49E11.4 protein.
Length = 213
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -1
Query: 257 RNFSWAWRTTKQATKFAET*SVHFVSVLFVNTSIY 153
R SW+ + T ATKFAET + V+ SI+
Sbjct: 58 RKISWSKKLTNAATKFAETCPKNHSVVMNTGESIF 92
>U00052-2|AAK95881.1| 404|Caenorhabditis elegans Hypothetical
protein K02F3.6 protein.
Length = 404
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 345 RAEWQYSEREKENI-EGFYSRTTRGNKIACLFVRCSPNARFTILFSHG 485
R+ ++ +REK N+ EG+ SR + K+ +V+ + + +LF HG
Sbjct: 100 RSLFEKKQREKPNVLEGWDSRYIKLKKVRLHYVQTGSDDKPLMLFIHG 147
>AC006834-5|AAF40007.1| 451|Caenorhabditis elegans Hypothetical
protein ZK973.3 protein.
Length = 451
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 268 ANLAAIFPGHGGQQNRQQSSLKLNPFI 188
A L +F GHGGQQ + S L P++
Sbjct: 67 AFLFGVFDGHGGQQCSRHISTNLYPYL 93
>U55363-8|AAA97966.1| 829|Caenorhabditis elegans Germinal center
kinase family protein2 protein.
Length = 829
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 337 SQNALSGNTQNVKKKTSKASTPERRGAT 420
+Q A +GN++N TS ASTP G T
Sbjct: 426 AQKAAAGNSKNRFSSTSIASTPSEDGLT 453
>AF040655-7|AAB95044.2| 565|Caenorhabditis elegans Hypothetical
protein T24E12.9 protein.
Length = 565
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = -3
Query: 453 LDCNEQRDRLSCCPSSFWSRSLRCFLFHVLS 361
L+CN Q++ ++ PSS+ + + FL H L+
Sbjct: 36 LECNRQQNNITAKPSSYATANNNIFLEHQLA 66
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,282,899
Number of Sequences: 27780
Number of extensions: 259781
Number of successful extensions: 651
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 649
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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