Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_J03
         (870 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0822 + 21762662-21762767,21763295-21763347,21764639-217647...    64   2e-10
07_03_0823 + 21765960-21766064,21766166-21766327,21766616-217667...    44   2e-04
11_01_0471 - 3648871-3649078,3649841-3649926,3650111-3650155,365...    33   0.30 
01_01_1236 - 10020837-10021041,10021746-10021831,10022552-100230...    31   1.2  
08_01_0317 - 2807275-2807487,2807573-2807737,2807818-2807987,280...    31   1.6  
08_02_1125 + 24488073-24488244,24488358-24488398,24488621-244888...    30   2.8  
01_06_1641 - 38845676-38845693,38846309-38846505,38846800-388472...    29   4.8  
01_04_0017 - 15113479-15113580,15113950-15114117,15115011-151152...    29   4.8  
08_02_0107 + 12494650-12495270,12507463-12508146,12508325-125084...    28   8.5  
06_03_1114 + 27719099-27719252,27719340-27719570,27720508-277211...    28   8.5  

>07_03_0822 +
           21762662-21762767,21763295-21763347,21764639-21764764,
           21764960-21765062,21765146-21765222
          Length = 154

 Score = 63.7 bits (148), Expect = 2e-10
 Identities = 30/107 (28%), Positives = 63/107 (58%), Gaps = 4/107 (3%)
 Frame = +3

Query: 213 QIRASEIRQTQINWQSYLQSQMITQRDHDFIVNLDQRGQKD---LPDKNPDACAEVFLNL 383
           ++   ++ +  I W+SY+ +++I+      +   D + +     L D++  +   VFLN+
Sbjct: 48  ELTTEQVLKRDIPWESYMANKLISGTCLQLLRRYDHKPESQRGPLLDEDGPSYVRVFLNI 107

Query: 384 LTHISKDHTIQYILVLIDDILSEDKSRVKIFRETKFSG-NVWQPFLN 521
           L +ISK+ T++Y+L LID++L+ +  R  +F +   SG +++ PFL+
Sbjct: 108 LRNISKEDTVEYVLALIDEMLAVNPKRAALFYDNSLSGEDIYDPFLS 154


>07_03_0823 +
           21765960-21766064,21766166-21766327,21766616-21766741,
           21766831-21766956,21767519-21767698,21768204-21768452
          Length = 315

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 21/75 (28%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
 Frame = +3

Query: 630 LSWLKDQLK--TNNNDYIQSVARCLQMMLRIDEYRFAFLSVDGISTLLSIL---ASRVNF 794
           + WL  QL+  T+ N  + +   CL  +LR    R  F+  DG+  L+ ++   +++ + 
Sbjct: 29  VDWLCSQLRNPTHPNCSVPTAMHCLATLLREQYVRALFVQADGVKLLIPLISPASTQQSI 88

Query: 795 QVQYQLVFCLWVLTF 839
           Q+ Y+   C+W+L+F
Sbjct: 89  QLLYETCLCIWLLSF 103


>11_01_0471 -
           3648871-3649078,3649841-3649926,3650111-3650155,
           3650306-3650815,3651700-3653757
          Length = 968

 Score = 33.1 bits (72), Expect = 0.30
 Identities = 23/90 (25%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
 Frame = +3

Query: 348 NPDACAEVFLNLLTHI--SKDHTIQYILVLIDDILSE-DKSRVKIFRETKFSGNVWQPFL 518
           N +    +F+ ++ ++  S+DHTIQ +L+L  +I+ + D +  K+  E      + Q   
Sbjct: 47  NGETLPHLFITVVRYVLPSEDHTIQKLLLLYLEIVDKRDVASGKVLPEMIL---ICQNLR 103

Query: 519 NLLNRQDEFVQHMTARIIAKLACWHPQLMD 608
           N L   +E+++ +T R + +L    P+L++
Sbjct: 104 NNLQHPNEYIRGVTLRFLCRLN--EPELLE 131


>01_01_1236 -
           10020837-10021041,10021746-10021831,10022552-10023061,
           10023914-10025965
          Length = 950

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 20/89 (22%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
 Frame = +3

Query: 348 NPDACAEVFLNLLTHI--SKDHTIQYILVLIDDILSEDKSRVKIFRETKFSGNVWQPFLN 521
           N +    +F+ ++ ++  S+DHTIQ +L+L  +I+ +  +  +   E      + Q   N
Sbjct: 47  NGETLPTLFITVVRYVLPSEDHTIQKLLLLYLEIIDKRDAAGRGLPEMIL---ICQNLRN 103

Query: 522 LLNRQDEFVQHMTARIIAKLACWHPQLMD 608
            L+  +E+++ +T R + +L+   P++++
Sbjct: 104 NLHHPNEYIRGVTLRFLCRLS--EPEVLE 130


>08_01_0317 -
           2807275-2807487,2807573-2807737,2807818-2807987,
           2808256-2808724,2810581-2810727,2810968-2810976,
           2811054-2811890
          Length = 669

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 18/48 (37%), Positives = 26/48 (54%)
 Frame = +3

Query: 603 MDKSDLHFYLSWLKDQLKTNNNDYIQSVARCLQMMLRIDEYRFAFLSV 746
           +D SD+H    W+   L++N  + +    RC   +L ID Y FAF SV
Sbjct: 99  LDYSDIH---RWVHHVLRSNARE-VGIFVRCGSKLLSIDGYPFAFNSV 142


>08_02_1125 +
           24488073-24488244,24488358-24488398,24488621-24488889,
           24489061-24489157,24489407-24489753,24489816-24490173,
           24490319-24490894,24491374-24491649
          Length = 711

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 15/59 (25%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
 Frame = +3

Query: 222 ASEIRQTQ-INWQSYLQSQMITQRDHDFIVNLDQRGQKDLPDKNPDACAEVFLNLLTHI 395
           A E++  +   W +   S ++ Q +  F++N   + Q+D  D NP      +L++L H+
Sbjct: 460 AIEVQNIEDFTWLNSSYSPVLKQLESQFMINYYFKTQQDKRDNNPKFQNPKYLSILNHL 518


>01_06_1641 -
           38845676-38845693,38846309-38846505,38846800-38847265,
           38847351-38847536
          Length = 288

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = -3

Query: 367 SAQASGFLSGRSFCPRWSKFTI 302
           SA +SG  SGR FC +W+K ++
Sbjct: 262 SASSSGSASGRVFCAQWTKCSL 283


>01_04_0017 -
           15113479-15113580,15113950-15114117,15115011-15115229,
           15115303-15115446,15115558-15115840,15115936-15115991,
           15116067-15116216,15116299-15116385,15116463-15116498,
           15116746-15116808,15116887-15116967,15117053-15117142,
           15117349-15117426,15117510-15117731,15117788-15117835,
           15117948-15118133,15120910-15121009,15121107-15121246
          Length = 750

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
 Frame = -2

Query: 485 RLTKYLHP-RFIFRKNVINEHKNVLNGVVLADMRQEVEKDFGTGIRILVRQIFLPALV*V 309
           R+T+ L P   IF+++V NE   ++     A   ++ EK    G++    Q+F+  ++ +
Sbjct: 301 RITRGLEPVSQIFKQHVTNEGTALVKQAEDAASNKKPEKKEIVGLQ---EQVFVRKIIEL 357

Query: 308 HDKIVIALSD 279
           HDK V  ++D
Sbjct: 358 HDKYVAYVTD 367


>08_02_0107 +
           12494650-12495270,12507463-12508146,12508325-12508472,
           12508493-12508584,12508713-12509426
          Length = 752

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 10/31 (32%), Positives = 21/31 (67%)
 Frame = +3

Query: 369 VFLNLLTHISKDHTIQYILVLIDDILSEDKS 461
           +F+NL+  +  ++  ++++V IDDIL   +S
Sbjct: 125 IFMNLMNKVFMEYVDKFVVVFIDDILVYSQS 155


>06_03_1114 +
           27719099-27719252,27719340-27719570,27720508-27721148,
           27721225-27722124
          Length = 641

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 18/56 (32%), Positives = 25/56 (44%)
 Frame = -2

Query: 494 REFRLTKYLHPRFIFRKNVINEHKNVLNGVVLADMRQEVEKDFGTGIRILVRQIFL 327
           ++F L     P  + R  V   H+N    VV+ D    V   +GT IR +   IFL
Sbjct: 94  KDFTLDPANFPADLLRPFVDRLHRNGQKYVVIIDPGISVNATYGTFIRAIKEDIFL 149


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,337,794
Number of Sequences: 37544
Number of extensions: 477602
Number of successful extensions: 1232
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1231
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2444475072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)