Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_J01
(823 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084158-4|AAK68562.1| 299|Caenorhabditis elegans Hypothetical ... 229 2e-60
AC084158-3|AAL00872.1| 313|Caenorhabditis elegans Hypothetical ... 229 2e-60
AC084158-5|AAO21417.1| 200|Caenorhabditis elegans Hypothetical ... 168 5e-42
AF043700-6|AAB97569.2| 443|Caenorhabditis elegans Hypothetical ... 30 1.7
U46669-6|AAM51526.1| 514|Caenorhabditis elegans Hypothetical pr... 30 2.3
U46669-5|AAA85746.3| 493|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z82089-1|CAB05002.1| 983|Caenorhabditis elegans Hypothetical pr... 29 5.3
Z81537-3|CAB04374.1| 348|Caenorhabditis elegans Hypothetical pr... 29 5.3
Z81511-2|CAB04167.1| 983|Caenorhabditis elegans Hypothetical pr... 29 5.3
AL021180-1|CAA15980.1| 383|Caenorhabditis elegans Hypothetical ... 29 5.3
AF303252-1|AAG50210.1| 383|Caenorhabditis elegans 3E324 protein. 29 5.3
Z75543-1|CAA99867.1| 314|Caenorhabditis elegans Hypothetical pr... 28 7.0
AF016428-6|AAK71396.2| 1733|Caenorhabditis elegans Hypothetical ... 28 7.0
Z66499-6|CAA91299.2| 765|Caenorhabditis elegans Hypothetical pr... 28 9.3
Z46381-5|CAD92392.1| 328|Caenorhabditis elegans Hypothetical pr... 28 9.3
U67950-1|AAP13771.1| 465|Caenorhabditis elegans Hypothetical pr... 28 9.3
U58746-2|AAB00622.2| 283|Caenorhabditis elegans Hypothetical pr... 28 9.3
U58745-2|AAU05593.1| 569|Caenorhabditis elegans Hypothetical pr... 28 9.3
U58745-1|AAB00620.2| 574|Caenorhabditis elegans Hypothetical pr... 28 9.3
AC024881-9|AAK71410.1| 588|Caenorhabditis elegans Hypothetical ... 28 9.3
>AC084158-4|AAK68562.1| 299|Caenorhabditis elegans Hypothetical
protein Y69A2AR.18a protein.
Length = 299
Score = 229 bits (560), Expect = 2e-60
Identities = 115/212 (54%), Positives = 150/212 (70%), Gaps = 4/212 (1%)
Frame = +3
Query: 153 RNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYER--- 323
R ATLK ISIRLKSVKNIQKIT+SMKMV+AAKY +AER+LK AR YG GA F++
Sbjct: 23 RGFATLKDISIRLKSVKNIQKITKSMKMVAAAKYAKAERELKGARAYGVGAKTFFDNIDP 82
Query: 324 -AEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICVGDKSRGI 500
E ++ KQ+ V +TSDRGLCG VH+ + K +N L+ G + I+V+ +GDKSR
Sbjct: 83 VVEGVEKQESKKQVLVLITSDRGLCGGVHSSIVKEAKNILNNAGDKEIRVVAIGDKSRAG 142
Query: 501 LQRLYGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKIIYNKFKSVVSYAQSD 680
LQRLY I+ NEIGR PP+F DAS A AIL SGY+F +G I++N+FK+VVSY S
Sbjct: 143 LQRLYANSILLSGNEIGRAPPSFADASIAAKAILDSGYDFETGTILFNRFKTVVSYETSK 202
Query: 681 LPLYTKKSIESASKLTAYDSLDSDVLQSYTEF 776
L + ++I++ L+ YDS+D DVLQSY+E+
Sbjct: 203 LQILPLEAIKAKEALSTYDSVDDDVLQSYSEY 234
>AC084158-3|AAL00872.1| 313|Caenorhabditis elegans Hypothetical
protein Y69A2AR.18b protein.
Length = 313
Score = 229 bits (560), Expect = 2e-60
Identities = 115/212 (54%), Positives = 150/212 (70%), Gaps = 4/212 (1%)
Frame = +3
Query: 153 RNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYER--- 323
R ATLK ISIRLKSVKNIQKIT+SMKMV+AAKY +AER+LK AR YG GA F++
Sbjct: 23 RGFATLKDISIRLKSVKNIQKITKSMKMVAAAKYAKAERELKGARAYGVGAKTFFDNIDP 82
Query: 324 -AEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICVGDKSRGI 500
E ++ KQ+ V +TSDRGLCG VH+ + K +N L+ G + I+V+ +GDKSR
Sbjct: 83 VVEGVEKQESKKQVLVLITSDRGLCGGVHSSIVKEAKNILNNAGDKEIRVVAIGDKSRAG 142
Query: 501 LQRLYGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKIIYNKFKSVVSYAQSD 680
LQRLY I+ NEIGR PP+F DAS A AIL SGY+F +G I++N+FK+VVSY S
Sbjct: 143 LQRLYANSILLSGNEIGRAPPSFADASIAAKAILDSGYDFETGTILFNRFKTVVSYETSK 202
Query: 681 LPLYTKKSIESASKLTAYDSLDSDVLQSYTEF 776
L + ++I++ L+ YDS+D DVLQSY+E+
Sbjct: 203 LQILPLEAIKAKEALSTYDSVDDDVLQSYSEY 234
>AC084158-5|AAO21417.1| 200|Caenorhabditis elegans Hypothetical
protein Y69A2AR.18c protein.
Length = 200
Score = 168 bits (408), Expect = 5e-42
Identities = 87/154 (56%), Positives = 107/154 (69%), Gaps = 4/154 (2%)
Frame = +3
Query: 153 RNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYER--- 323
R ATLK ISIRLKSVKNIQKIT+SMKMV+AAKY +AER+LK AR YG GA F++
Sbjct: 23 RGFATLKDISIRLKSVKNIQKITKSMKMVAAAKYAKAERELKGARAYGVGAKTFFDNIDP 82
Query: 324 -AEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICVGDKSRGI 500
E ++ KQ+ V +TSDRGLCG VH+ + K +N L+ G + I+V+ +GDKSR
Sbjct: 83 VVEGVEKQESKKQVLVLITSDRGLCGGVHSSIVKEAKNILNNAGDKEIRVVAIGDKSRAG 142
Query: 501 LQRLYGKHIISVANEIGRLPPTFLDASQLATAIL 602
LQRLY I+ NEIGR PP+F DAS A AIL
Sbjct: 143 LQRLYANSILLSGNEIGRAPPSFADASIAAKAIL 176
>AF043700-6|AAB97569.2| 443|Caenorhabditis elegans Hypothetical
protein K09H9.2 protein.
Length = 443
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +3
Query: 273 LKAARPYGEGAVQFYERAEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIR 431
L RP+ + + + E +P DP F+ ++ D + GA G S IR
Sbjct: 63 LSKNRPFDQAMNKTMTKMEFSPDYSDPSSEFMLLSVDESVIGAFSEGQSLTIR 115
>U46669-6|AAM51526.1| 514|Caenorhabditis elegans Hypothetical
protein C41G11.4b protein.
Length = 514
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1
Query: 712 APAS*RHTTLWTATYSNPTRSSRW 783
APAS R TLW T R++RW
Sbjct: 440 APASARSNTLWVVTVDTARRNARW 463
>U46669-5|AAA85746.3| 493|Caenorhabditis elegans Hypothetical
protein C41G11.4a protein.
Length = 493
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1
Query: 712 APAS*RHTTLWTATYSNPTRSSRW 783
APAS R TLW T R++RW
Sbjct: 419 APASARSNTLWVVTVDTARRNARW 442
>Z82089-1|CAB05002.1| 983|Caenorhabditis elegans Hypothetical
protein ZK270.1 protein.
Length = 983
Score = 28.7 bits (61), Expect = 5.3
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +3
Query: 600 LTSGYEFGSGKIIYNKFKSVVSYAQSDLPLYTKKSIESASKL-TAYDSLDSDVLQSYT 770
+ GYEFGS +I N+ + ++ + ++ + + SK A + SD LQ YT
Sbjct: 482 IVGGYEFGSDEIDKNRMEINIAENRVNIARHHRPLTRQPSKFHEATQPIISDSLQKYT 539
>Z81537-3|CAB04374.1| 348|Caenorhabditis elegans Hypothetical
protein F41D3.3 protein.
Length = 348
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/62 (20%), Positives = 33/62 (53%)
Frame = -3
Query: 587 QLTCVQESRWETSNLISNTNDVLSVQSLQDTARFISHTDHLDVLSTRFAETVADHFRYTS 408
Q+ V++ R++ + I + N+++++Q + H +D+L A+ + HF++
Sbjct: 146 QVESVEKQRFKNALQIQSVNELVTLQRTSTDSCL--HCPGVDILDRESAQALRKHFQFAD 203
Query: 407 VY 402
V+
Sbjct: 204 VW 205
>Z81511-2|CAB04167.1| 983|Caenorhabditis elegans Hypothetical
protein ZK270.1 protein.
Length = 983
Score = 28.7 bits (61), Expect = 5.3
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +3
Query: 600 LTSGYEFGSGKIIYNKFKSVVSYAQSDLPLYTKKSIESASKL-TAYDSLDSDVLQSYT 770
+ GYEFGS +I N+ + ++ + ++ + + SK A + SD LQ YT
Sbjct: 482 IVGGYEFGSDEIDKNRMEINIAENRVNIARHHRPLTRQPSKFHEATQPIISDSLQKYT 539
>AL021180-1|CAA15980.1| 383|Caenorhabditis elegans Hypothetical
protein Y44F5A.1 protein.
Length = 383
Score = 28.7 bits (61), Expect = 5.3
Identities = 19/42 (45%), Positives = 21/42 (50%)
Frame = +3
Query: 471 ICVGDKSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATA 596
+CV D G R K SV I LPPT L + QLATA
Sbjct: 75 LCVFDIDTGKRVRCILKCHRSVPTAICTLPPTALKSQQLATA 116
>AF303252-1|AAG50210.1| 383|Caenorhabditis elegans 3E324 protein.
Length = 383
Score = 28.7 bits (61), Expect = 5.3
Identities = 19/42 (45%), Positives = 21/42 (50%)
Frame = +3
Query: 471 ICVGDKSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATA 596
+CV D G R K SV I LPPT L + QLATA
Sbjct: 75 LCVFDIDTGKRVRCILKCHRSVPTAICTLPPTALKSQQLATA 116
>Z75543-1|CAA99867.1| 314|Caenorhabditis elegans Hypothetical
protein K01D12.1 protein.
Length = 314
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -2
Query: 108 PVRSVPTFCKFYGCLSVKFTSRRKN 34
PV PTF FY C+ K S R N
Sbjct: 52 PVEGTPTFKAFYNCVYPKLASLRGN 76
>AF016428-6|AAK71396.2| 1733|Caenorhabditis elegans Hypothetical
protein T05C3.2 protein.
Length = 1733
Score = 28.3 bits (60), Expect = 7.0
Identities = 19/41 (46%), Positives = 21/41 (51%)
Frame = +1
Query: 526 SLVLLMRLDVSHLLSWTQVSWPLPFSPQDTSLVPERSFITS 648
SL LL R+D +H L W S P PF SL P S I S
Sbjct: 560 SLDLLSRIDGAHELLWFPPSLP-PFVKLFASLTPGGSLIYS 599
>Z66499-6|CAA91299.2| 765|Caenorhabditis elegans Hypothetical
protein T01B7.6 protein.
Length = 765
Score = 27.9 bits (59), Expect = 9.3
Identities = 19/58 (32%), Positives = 25/58 (43%)
Frame = -1
Query: 490 DLSPTQITLMFSAPGSLRRLRITLDTPVCTAPHKPLSEVIATNNCLGSSSGGVTSALS 317
D T M + G LR + TPV +PL +N LGSS G ++S S
Sbjct: 544 DFKMTSSIPMTNGLGHLRLGSVWSGTPVEAKQEEPLHYFQQQDNFLGSSFGPISSTFS 601
>Z46381-5|CAD92392.1| 328|Caenorhabditis elegans Hypothetical
protein M01F1.8a protein.
Length = 328
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +1
Query: 595 PFSPQDTSLVPERSFITSSSLWYRTPSPTCPSTLRSLLRAPAS 723
P Q L P + S+S W P+PT P T++ LR P +
Sbjct: 207 PAPLQQRPLAPPNPQVPSTSAWNIAPTPT-PVTVQRPLRKPVT 248
>U67950-1|AAP13771.1| 465|Caenorhabditis elegans Hypothetical
protein T01B6.3a protein.
Length = 465
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
Frame = -3
Query: 602 ENGSGQLTC--VQESRWETSNLISN 534
E GSG + C VQ S WE +N+IS+
Sbjct: 233 EIGSGNIICSGVQNSVWEAANIISH 257
>U58746-2|AAB00622.2| 283|Caenorhabditis elegans Hypothetical
protein R05G6.7 protein.
Length = 283
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +3
Query: 558 PPTFLDASQLATAILTSGYEFGSGKI 635
PPTF D + A + GY FG KI
Sbjct: 3 PPTFADLGKSAKDLFNKGYNFGFLKI 28
>U58745-2|AAU05593.1| 569|Caenorhabditis elegans Hypothetical
protein C10G6.1b protein.
Length = 569
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +3
Query: 348 DPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAEN 461
+PK+L + +RGL VS +++NRL+E G+EN
Sbjct: 230 NPKELLQFLKLNRGLFFIRSNKVS-LVKNRLNEDGSEN 266
>U58745-1|AAB00620.2| 574|Caenorhabditis elegans Hypothetical
protein C10G6.1a protein.
Length = 574
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +3
Query: 348 DPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAEN 461
+PK+L + +RGL VS +++NRL+E G+EN
Sbjct: 230 NPKELLQFLKLNRGLFFIRSNKVS-LVKNRLNEDGSEN 266
>AC024881-9|AAK71410.1| 588|Caenorhabditis elegans Hypothetical
protein Y97E10B.1 protein.
Length = 588
Score = 27.9 bits (59), Expect = 9.3
Identities = 29/102 (28%), Positives = 43/102 (42%), Gaps = 3/102 (2%)
Frame = -3
Query: 503 QDTARFISHTDHLDVLSTRFAETVADHFRYTSVYSSAQTSVRGH-SNKQLLGVIFG-RCN 330
+++ARFI+ D DVL R A T A+ F+ + H N + FG + +
Sbjct: 293 KESARFITFLDLDDVLIPRLAPTYAEEFQKLMDGKKKLAYIFYHKENYDAVTTRFGSKFS 352
Query: 329 LSP-FIELYCTFTIGTSSFQVTLSTGVFSS*HHLHGLCDFLD 207
L F L C + S++Q GV H+ L F D
Sbjct: 353 LKKMFGSLACKHKVNESNYQ---DVGVQMGKRHIIRLSSFKD 391
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,646,643
Number of Sequences: 27780
Number of extensions: 475476
Number of successful extensions: 1333
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1257
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1330
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2029935014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -