Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_F_I22
         (739 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0645 + 4670966-4671021,4671128-4671177,4671270-4671350,467...    29   3.9  
12_01_0029 + 248725-248769,248870-249074,250040-250128,250237-25...    28   6.7  
11_01_0030 + 233285-233329,233439-233643,234637-234725,234834-23...    28   6.7  
04_01_0126 - 1340540-1341376,1341437-1341900,1342105-1342156,134...    28   6.7  

>06_01_0645 +
           4670966-4671021,4671128-4671177,4671270-4671350,
           4671862-4672078,4673220-4673607,4673830-4674033,
           4675174-4675334,4675401-4675586,4675732-4675963,
           4676530-4676732,4677074-4677208,4677367-4677550
          Length = 698

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 14/55 (25%), Positives = 29/55 (52%)
 Frame = -3

Query: 230 TLLNLFVLSDSCVAA**PLKPK*KSLTSLHQQEVRQHFDDIALLQHSCDAXSELQ 66
           TL+N++  +  C+        K K++     +  R++F +   L+H+CD  S++Q
Sbjct: 542 TLVNVYRAAKECLEKSKNANAKEKTMEKALNRWCRENFINYRSLRHACDVHSQIQ 596


>12_01_0029 + 248725-248769,248870-249074,250040-250128,250237-250315,
            250429-250556,250764-250862,250953-251061,251301-251380,
            251464-251691,251768-251833,251970-252086,252538-252735,
            252847-252963,253056-253115,253228-253314,253419-253502,
            253623-253757,253837-253899,253979-254083,254174-254286,
            254374-254626,254715-254851,254970-255248,255352-256354,
            256450-256935,257023-257193,257285-257470,257820-257942,
            258024-258134,258225-258395
          Length = 1708

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
 Frame = -3

Query: 248  HIALFCTLLNLFVLSDSCVAA**PLKPK*KSLTSLHQQEVRQHFDDIA--LLQHSCDAXS 75
            HI LF T LN+  L  +C       +   K LT L+ Q     FD+ A  ++ HS DA  
Sbjct: 1349 HIKLFSTRLNIPKLIRACDE-----QQHWKELTYLYIQY--DEFDNAATTIMNHSPDAWD 1401

Query: 74   ELQHDDVA 51
             +Q  DVA
Sbjct: 1402 HMQFKDVA 1409


>11_01_0030 + 233285-233329,233439-233643,234637-234725,234834-234912,
            235048-235175,235383-235481,235572-235680,235920-235999,
            236083-236310,236387-236452,236589-236705,237142-237339,
            237451-237567,237660-237719,237832-237918,238023-238106,
            238233-238367,238446-238508,238588-238692,238781-238893,
            238981-239233,239322-239458,239577-239855,239958-240960,
            241054-241539,241627-241797,241890-242075,242426-242548,
            242630-242740,242834-243004
          Length = 1708

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
 Frame = -3

Query: 248  HIALFCTLLNLFVLSDSCVAA**PLKPK*KSLTSLHQQEVRQHFDDIA--LLQHSCDAXS 75
            HI LF T LN+  L  +C       +   K LT L+ Q     FD+ A  ++ HS DA  
Sbjct: 1349 HIKLFSTRLNIPKLIRACDE-----QQHWKELTYLYIQY--DEFDNAATTIMNHSPDAWD 1401

Query: 74   ELQHDDVA 51
             +Q  DVA
Sbjct: 1402 HMQFKDVA 1409


>04_01_0126 - 1340540-1341376,1341437-1341900,1342105-1342156,
            1342225-1342799,1343596-1343703,1345823-1346155,
            1346783-1349306
          Length = 1630

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = -3

Query: 152  TSLHQQE-VRQHFDDIALLQHSCDAXSELQHDDV 54
            TS+   E +  HFDD  LLQH C    +   D++
Sbjct: 1569 TSIGDSELIDDHFDDNFLLQHLCSEIMDFSGDNI 1602


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,702,935
Number of Sequences: 37544
Number of extensions: 152331
Number of successful extensions: 327
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 324
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 327
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)