Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_F_I22
(739 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC011707-1|AAH11707.1| 287|Homo sapiens nuclear receptor bindin... 36 0.20
AY267840-1|AAP03082.1| 287|Homo sapiens comodulator of PPAR and... 36 0.20
AY267839-1|AAP03081.1| 237|Homo sapiens comodulator of PPAR and... 36 0.20
AL590502-2|CAO03491.1| 287|Homo sapiens nuclear receptor bindin... 36 0.20
AL136656-1|CAB66591.1| 287|Homo sapiens hypothetical protein pr... 36 0.20
AK054957-1|BAB70833.1| 287|Homo sapiens protein ( Homo sapiens ... 36 0.20
AF267866-1|AAG44735.1| 277|Homo sapiens hNRBF-2 protein. 36 0.20
DQ414820-1|ABD72916.1| 235|Homo sapiens HBV DNAPTP1-transactiva... 30 10.0
BC029911-1|AAH29911.1| 209|Homo sapiens C9orf119 protein protein. 30 10.0
AL590708-24|CAI13844.1| 162|Homo sapiens chromosome 9 open read... 30 10.0
AL590708-23|CAI13843.1| 209|Homo sapiens chromosome 9 open read... 30 10.0
AL590708-20|CAI13840.1| 144|Homo sapiens chromosome 9 open read... 30 10.0
>BC011707-1|AAH11707.1| 287|Homo sapiens nuclear receptor binding
factor 2 protein.
Length = 287
Score = 35.5 bits (78), Expect = 0.20
Identities = 25/86 (29%), Positives = 34/86 (39%), Gaps = 3/86 (3%)
Frame = +2
Query: 32 PLNXXXXXXXXXXXXXXXXSYAXAMQCHQSAAELLVDAMKXXXXXXXXXXXXXQHSYHLK 211
PLN Y A+ CH+ AA L +AMK Q H+K
Sbjct: 7 PLNLAHQQSRRADRLLAAGKYEEAISCHKKAAAYLSEAMKLTQSEQAHLSLELQRDSHMK 66
Query: 212 QKDLI--KYKKEQ-YVRVKKAMDTIK 280
Q LI ++K+ Q R+K +T K
Sbjct: 67 QLLLIQERWKRAQREERLKAQQNTDK 92
>AY267840-1|AAP03082.1| 287|Homo sapiens comodulator of PPAR and
RXR 2 protein.
Length = 287
Score = 35.5 bits (78), Expect = 0.20
Identities = 25/86 (29%), Positives = 34/86 (39%), Gaps = 3/86 (3%)
Frame = +2
Query: 32 PLNXXXXXXXXXXXXXXXXSYAXAMQCHQSAAELLVDAMKXXXXXXXXXXXXXQHSYHLK 211
PLN Y A+ CH+ AA L +AMK Q H+K
Sbjct: 7 PLNLAHQQSRRADRLLAAGKYEEAISCHKKAAAYLSEAMKLTQSEQAHLSLELQRDSHMK 66
Query: 212 QKDLI--KYKKEQ-YVRVKKAMDTIK 280
Q LI ++K+ Q R+K +T K
Sbjct: 67 QLLLIQERWKRAQREERLKAQQNTDK 92
>AY267839-1|AAP03081.1| 237|Homo sapiens comodulator of PPAR and
RXR 1 protein.
Length = 237
Score = 35.5 bits (78), Expect = 0.20
Identities = 24/85 (28%), Positives = 34/85 (40%), Gaps = 3/85 (3%)
Frame = +2
Query: 32 PLNXXXXXXXXXXXXXXXXSYAXAMQCHQSAAELLVDAMKXXXXXXXXXXXXXQHSYHLK 211
PLN Y A+ CH+ AA L +AMK Q H+K
Sbjct: 7 PLNLAHQQSRRADRLLAAGKYEEAISCHKKAAAYLSEAMKLTQSEQAHLSLELQRDSHMK 66
Query: 212 QKDLI--KYKKEQ-YVRVKKAMDTI 277
Q LI ++K+ Q R+K +T+
Sbjct: 67 QLLLIQERWKRAQREERLKAQQNTL 91
>AL590502-2|CAO03491.1| 287|Homo sapiens nuclear receptor binding
factor-2 protein.
Length = 287
Score = 35.5 bits (78), Expect = 0.20
Identities = 25/86 (29%), Positives = 34/86 (39%), Gaps = 3/86 (3%)
Frame = +2
Query: 32 PLNXXXXXXXXXXXXXXXXSYAXAMQCHQSAAELLVDAMKXXXXXXXXXXXXXQHSYHLK 211
PLN Y A+ CH+ AA L +AMK Q H+K
Sbjct: 7 PLNLAHQQSRRADRLLAAGKYEEAISCHKKAAAYLSEAMKLTQSEQAHLSLELQRDSHMK 66
Query: 212 QKDLI--KYKKEQ-YVRVKKAMDTIK 280
Q LI ++K+ Q R+K +T K
Sbjct: 67 QLLLIQERWKRAQREERLKAQQNTDK 92
>AL136656-1|CAB66591.1| 287|Homo sapiens hypothetical protein
protein.
Length = 287
Score = 35.5 bits (78), Expect = 0.20
Identities = 25/86 (29%), Positives = 34/86 (39%), Gaps = 3/86 (3%)
Frame = +2
Query: 32 PLNXXXXXXXXXXXXXXXXSYAXAMQCHQSAAELLVDAMKXXXXXXXXXXXXXQHSYHLK 211
PLN Y A+ CH+ AA L +AMK Q H+K
Sbjct: 7 PLNLAHQQSRRADRLLAAGKYEEAISCHKKAAAYLSEAMKLTQSEQAHLSLELQRDSHMK 66
Query: 212 QKDLI--KYKKEQ-YVRVKKAMDTIK 280
Q LI ++K+ Q R+K +T K
Sbjct: 67 QLLLIQERWKRAQREERLKAQQNTDK 92
>AK054957-1|BAB70833.1| 287|Homo sapiens protein ( Homo sapiens
cDNA FLJ30395 fis, clone BRACE2008385, highly similar to
Rattus norvegicus NRBF-2 mRNA for nuclear receptor
binding ).
Length = 287
Score = 35.5 bits (78), Expect = 0.20
Identities = 25/86 (29%), Positives = 34/86 (39%), Gaps = 3/86 (3%)
Frame = +2
Query: 32 PLNXXXXXXXXXXXXXXXXSYAXAMQCHQSAAELLVDAMKXXXXXXXXXXXXXQHSYHLK 211
PLN Y A+ CH+ AA L +AMK Q H+K
Sbjct: 7 PLNLAHQQSRRADRLLAAGKYEEAISCHKKAAAYLSEAMKLTQSEQAHLSLELQRDSHMK 66
Query: 212 QKDLI--KYKKEQ-YVRVKKAMDTIK 280
Q LI ++K+ Q R+K +T K
Sbjct: 67 QLLLIQERWKRAQREERLKAQQNTDK 92
>AF267866-1|AAG44735.1| 277|Homo sapiens hNRBF-2 protein.
Length = 277
Score = 35.5 bits (78), Expect = 0.20
Identities = 25/86 (29%), Positives = 34/86 (39%), Gaps = 3/86 (3%)
Frame = +2
Query: 32 PLNXXXXXXXXXXXXXXXXSYAXAMQCHQSAAELLVDAMKXXXXXXXXXXXXXQHSYHLK 211
PLN Y A+ CH+ AA L +AMK Q H+K
Sbjct: 7 PLNLAHQQSRRADRLLAAGKYEEAISCHKKAAAYLSEAMKLTQSEQAHLSLELQRDSHMK 66
Query: 212 QKDLI--KYKKEQ-YVRVKKAMDTIK 280
Q LI ++K+ Q R+K +T K
Sbjct: 67 QLLLIQERWKRAQREERLKAQQNTDK 92
>DQ414820-1|ABD72916.1| 235|Homo sapiens HBV DNAPTP1-transactivated
protein A protein.
Length = 235
Score = 29.9 bits (64), Expect = 10.0
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +2
Query: 581 LKEKVNYLEKERAKYLNLGMSSNDLSFNXTSLSISNDISN 700
LKEK + L+KE +++++ G S ++L + T L NDI +
Sbjct: 166 LKEKRDMLDKEISQFVSEGYSVDELEDHITQLHEYNDIKD 205
>BC029911-1|AAH29911.1| 209|Homo sapiens C9orf119 protein protein.
Length = 209
Score = 29.9 bits (64), Expect = 10.0
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +2
Query: 581 LKEKVNYLEKERAKYLNLGMSSNDLSFNXTSLSISNDISN 700
LKEK + L+KE +++++ G S ++L + T L NDI +
Sbjct: 140 LKEKRDMLDKEISQFVSEGYSVDELEDHITQLHEYNDIKD 179
>AL590708-24|CAI13844.1| 162|Homo sapiens chromosome 9 open reading
frame 119 protein.
Length = 162
Score = 29.9 bits (64), Expect = 10.0
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +2
Query: 581 LKEKVNYLEKERAKYLNLGMSSNDLSFNXTSLSISNDISN 700
LKEK + L+KE +++++ G S ++L + T L NDI +
Sbjct: 93 LKEKRDMLDKEISQFVSEGYSVDELEDHITQLHEYNDIKD 132
>AL590708-23|CAI13843.1| 209|Homo sapiens chromosome 9 open reading
frame 119 protein.
Length = 209
Score = 29.9 bits (64), Expect = 10.0
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +2
Query: 581 LKEKVNYLEKERAKYLNLGMSSNDLSFNXTSLSISNDISN 700
LKEK + L+KE +++++ G S ++L + T L NDI +
Sbjct: 140 LKEKRDMLDKEISQFVSEGYSVDELEDHITQLHEYNDIKD 179
>AL590708-20|CAI13840.1| 144|Homo sapiens chromosome 9 open reading
frame 119 protein.
Length = 144
Score = 29.9 bits (64), Expect = 10.0
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +2
Query: 581 LKEKVNYLEKERAKYLNLGMSSNDLSFNXTSLSISNDISN 700
LKEK + L+KE +++++ G S ++L + T L NDI +
Sbjct: 75 LKEKRDMLDKEISQFVSEGYSVDELEDHITQLHEYNDIKD 114
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,771,518
Number of Sequences: 237096
Number of extensions: 907676
Number of successful extensions: 2017
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1937
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2017
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8791154398
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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